t/data/AY095303S1.gbk

   1 LOCUS       AY095303S1              2375 bp    DNA     linear   PLN 21-JAN-2003
   2 DEFINITION  Chlamydomonas reinhardtii c-type cytochrome synthesis 1 (CCS1)
   3             gene, ccs1-ac206 allele, 5'UTR and exons 1 through 6.
   4 ACCESSION   AY095303
   5 VERSION     AY095303.1  GI:25986619
   6 KEYWORDS    .
   7 SEGMENT     1 of 2
   8 SOURCE      Chlamydomonas reinhardtii
   9   ORGANISM  Chlamydomonas reinhardtii
  10             Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Volvocales;
  11             Chlamydomonadaceae; Chlamydomonas.
  12 REFERENCE   1  (bases 1 to 2375)
  13   AUTHORS   Dreyfuss,B.W., Hamel,P.P., Nakamoto,S.S. and Merchant,S.
  14   TITLE     Functional Analysis of a Divergent System II Protein, Ccs1,
  15             Involved in c-Type Cytochrome Biogenesis
  16   JOURNAL   J. Biol. Chem. 278 (4), 2604-2613 (2003)
  17    PUBMED   12427747
  18 REFERENCE   2  (bases 1 to 2375)
  19   AUTHORS   Dreyfuss,B.W., Hamel,P., Nakamoto,S.S. and Merchant,S.
  20   TITLE     Direct Submission
  21   JOURNAL   Submitted (11-APR-2002) Department of Chemistry & Biochemistry,
  22             University of California, Los Angeles, P.O. Box 951569, 405 Hilgard
  23             Avenue, Los Angeles, CA 90095-1569, USA
  24 FEATURES             Location/Qualifiers
  25      source          1..2375
  26                      /organism="Chlamydomonas reinhardtii"
  27                      /mol_type="genomic DNA"
  28                      /strain="ccs1-ac206"
  29                      /db_xref="taxon:3055"
  30      gene            order(124..2375,AY095304.1:1..1465)
  31                      /gene="CCS1"
  32                      /allele="ccs1-ac206"
  33      mRNA            join(124..330,512..825,1045..1233,1418..1798,2000..2131,
  34                      2253..2345,AY095304.1:6..303,AY095304.1:495..677,
  35                      AY095304.1:863..1465)
  36                      /gene="CCS1"
  37                      /product="c-type cytochrome synthesis 1"
  38      exon            124..330
  39                      /gene="CCS1"
  40                      /number=1
  41      5'UTR           124..206
  42                      /gene="CCS1"
  43      CDS             join(207..330,512..825,1045..1233,1418..1798,2000..2131,
  44                      2253..2345,AY095304.1:6..303,AY095304.1:495..677,
  45                      AY095304.1:863..1098)
  46                      /gene="CCS1"
  47                      /codon_start=1
  48                      /product="c-type cytochrome synthesis 1"
  49                      /protein_id="AAM44130.1"
  50                      /db_xref="GI:25986621"
  51                      /translation="MQPYASVSGRCLSRPDALHVIPFGRPLQAIAGRRFVRCFAKGGQ
  52                      PGDKKKLNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLGGGVASPRTL
  53                      VQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLVNYPDGAE
  54                      KVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQRWRFLT
  55                      QPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVRESCACQRTAAALLLRFHSVAADPS
  56                      PLLSFVLVAQVFVKDGSLYGFKGLAGKLGPIGVHAALLLCLFGTAWSGFGTLKGNVMC
  57                      PEGQDFQVASFLQPSSPIASMPASASNVIHVNKFTIDYRPDGSVAQFYSDLSLLDPAQ
  58                      GGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRVLGQDAPLARAAQAAEAQAAAS
  59                      TSGPTSSASSTSDALPQQRTAFNLPMASLEGKPGVAGRLWATFLPLAEPGQDGSAPKG
  60                      ISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVVEDVTGATGLELKSDPGV
  61                      PAVYAGFGGLMVTTLISYLSHSQVWALQQGSSLFVSGRTNRAKLAFDRELDDILNAVP
  62                      ELPPTAATTVASSASTAAPAPTAKQ"
  63      exon            512..825
  64                      /gene="CCS1"
  65                      /number=2
  66      exon            1045..1233
  67                      /gene="CCS1"
  68                      /number=3
  69      exon            1418..1798
  70                      /gene="CCS1"
  71                      /number=4
  72      variation       1648
  73                      /gene="CCS1"
  74                      /note="results in readthrough of typical intron 4 and
  75                      addition of 36 amino acids within stromal loop"
  76                      /replace="g"
  77      exon            2000..2131
  78                      /gene="CCS1"
  79                      /number=5
  80      exon            2253..2345
  81                      /gene="CCS1"
  82                      /number=6
  83 BASE COUNT      474 a    718 c    697 g    486 t
  84 ORIGIN
  85         1 cacatacgac cccaagcagg gccctgcgtg ggtgaaatgc cacacgcggc acgaatccgt
  86        61 cggccactcc atgaattgcc cacaaggcca caattgagcc tacaaggatg tggaagtgat
  87       121 aactacctag ctccactacc agctgcgact gcccagttct cgagctttct ttctgtccgg
  88       181 ccccgcgctt gcacgcgtgc acaaaaatgc agccatacgc ttccgtgagc gggcgatgtc
  89       241 tatctagacc agatgcattg catgtgatac cgtttgggcg accgctgcaa gcaattgccg
  90       301 ggcggcggtt cgttcgctgt tttgcgaaag gtgcgcagcc ggggaaagaa cacacgaatg
  91       361 ggtgtgcagg caattgatgg tttcactatc aattaattat cagggctggg ttgtacgcac
  92       421 ttggcagtgg acttgcatgc gtggaagcga tgtcgccacg ctgctattca aatattaagt
  93       481 tggagcctgc tctgctggac ccaaaacata ggaggacaac ctggtgacaa gaagaagctc
  94       541 aacgtgacgg acaagctgcg cctcgggaac actcctccca cgctggacgt gcttaaagcg
  95       601 ccacggccaa ccgacgctcc ctcagccatc gatgacgccc ccagcacttc gggcctgggg
  96       661 ctgggcggag gagtggcgag ccccaggact ttggtgcagt ccaatgccgt gcaggtggcg
  97       721 tggcgccggc tcatgaagga gctgtcgtcg ctcccacgcg ccatcgccat catggccctc
  98       781 atcgccgtgc tgtcgggcct gggcaccttc atcccccaaa acaaggtgcg ggggaatgcg
  99       841 acacatgaag ttaatgcaat tctgccaacc aagctgaagc acttgcattg gagccgcgcg
 100       901 ggatgagcca gcacaccagc tttgacctgc gcgtaccgca accaggcacc tacgccctcc
 101       961 cgcgcagtgc ctccctttcg gtctctccga ctcttccaac ctgtctgacc ctcatctcca
 102      1021 ccccccaatg tatccatcca acagtccatc gagtactacc tggtcaacta cccagacggc
 103      1081 gcggagaagg tgctggggtt cctgactggc gacctcattc tgaccctaca gctggaccac
 104      1141 atctacaccg ctgactattt ctacctgtcc atggggctgc tggccgcctc cctggctgcc
 105      1201 tgcacctaca cccgccagtg gcccgccgta aaggtgcgtg cgtaaagggt ttgggagtcg
 106      1261 taggaggaag gcagggtaga tggcgggaag gggcggacag agaggaagga ttggggcgta
 107      1321 ggttgtggtg acggagaagg cccggttgga gcctgcacgg gggttaggta aaggtgaaag
 108      1381 gcaggcaaat accgcccact cgtcgtgttc ctgacaggtg gctcagcgct ggcgcttcct
 109      1441 gacgcagccg aagtcgctgc ttaagcaggg gcgcacggag gtgttgccca acgcgcgtgt
 110      1501 gtccgacctg ggcgctatcc tgctgcagcg gggctaccag gtgagggaga gctgtgcgtg
 111      1561 tcagcgtacg gctgctgcat tacttcttag gtttcactcc gtcgctgctg acccttcacc
 112      1621 tctgctttcc tttgttcttg tggctcaagt gtttgtgaag gacggctcct tatacggctt
 113      1681 caagggcctg gccggcaaac tggggcccat cggcgtgcac gcggcgctgc tgctgtgcct
 114      1741 gttcggtacg gcgtggagcg ggttcggcac cctcaagggc aacgtcatgt gcccggaggt
 115      1801 gagggagcag aggacgcaca tggttgtctg gtggcggcac ggagacacgg tagtgacaag
 116      1861 ccggctcagg gcagtttggg aaggtggtga tgcaagttgc tggccaggga agtacgctca
 117      1921 cccatgttct ccgagtgctt gctatgttcc aacacgatcc cagaaatcgc acgaggacca
 118      1981 atcaacgttg cgcctgcagg gtcaagactt ccaggtggct tccttcctgc agccgtcctc
 119      2041 gccaattgcc agcatgcccg cctccgcctc caacgtcatc cacgtcaaca agttcaccat
 120      2101 tgactaccgc ccagatggct cagtggcgca ggtgcgtgcg ctacaggttg gccggaacca
 121      2161 tgccacactt tgcaccctca ccattcctgc gatagtgttg gttctcatca gtactgacgt
 122      2221 attcatctcc ctccatctgc cctatcccgc agttctactc ggacttgtcg ctgcttgatc
 123      2281 ccgcccaggg cggcaaggaa atgatgcgca agaccatcag cgtgaacgac cccttccgct
 124      2341 tcaacgtgag aatacaacgc atgacggtac ctgct
 125 //
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