aster-mpi/PKGBUILD

   1 # Contributor: mickele <mimocciola@yahoo.com>
   2 pkgname=aster-mpi
   3 _pkgnamesrc=aster
   4 pkgver=9.4.0
   5 pkgrel=2
   6 pkgdesc="Code-Aster provides a complete serie of analysis and multiphysics modelling methods. This version uses MPI thanks to mumps library."
   7 url="http://www.code-aster.org/index.php"
   8 license="GPL"
   9 depends=('python' 'python-numeric' 'lapack' 'tcl' 'tk' 'scotch' 'hdf5>=1.8.0' 'med>=2.3.5' 'metis-edf>=4.1' 'astk>=1.7.1-4' 'mpich2' 'mumps')
  10 makedepends=('sed' 'coreutils' 'patch')
  11 optdepends=('homard>=9.5: to refine and de-refine meshes')
  12 conflicts=()
  13 replaces=()
  14 backup=()
  15 arch=('i686' 'x86_64')
  16 install=(${pkgname}.install)
  17 source=(http://www.code-aster.org/V2/UPLOAD/DOC/Telechargement/${_pkgnamesrc}-full-src-${pkgver}-2.noarch.tar.gz ${_pkgnamesrc}-${pkgver}.diff)
  18 options=('!strip')
  19
  20 _pkgvershort=${pkgver:0:3}
  21 _installdir=/opt/aster
  22 _astkdir=${_installdir}/ASTK
  23 _mpich2dir=/opt/mpich2
  24 _pythonver=2.6
  25 # Change this var pointing to your favorite editor
  26 _editor=/usr/bin/emacs
  27
  28 build() {
  29   msg "  To create $pkgname follow these instructions:"
  30   msg "    - as root create a file named "/etc/mpd.conf" containing following lines"
  31   msg "          MPD_SECRETWORD=<your secret MPD_PASSWORD>"
  32   msg "          MPD_USE_ROOT_MPD=1"
  33   msg "    - change permissions of /etc/mpd.conf using following command"
  34   msg "          $ sudo chmod 600 /etc/mpd.conf"
  35   msg "    - verify that root can connect to sshd; usually you have to uncomment line"
  36   msg "      <# PermitRootLogin yes> in file /etc/sshd_config"
  37   msg "      from"
  38   msg "          # PermitRootLogin yes"
  39   msg "      to"
  40   msg "          PermitRootLogin yes"
  41   msg "      after having buillt ${pkgname} you can restore this option"
  42   msg "    - run mpd ring using command"
  43   msg "          $ sudo mpdboot"
  44   msg "    - in this PKGBUILD, comment line <return 1> after this messages"
  45   msg "      from"
  46   msg "          return 1"
  47   msg "      to"
  48   msg "          # return 1"
  49   msg "    - create package using command"
  50   msg "          $ sudo makepkg --asroot"
  51   msg "  If something goes wrong send a mail to mimocciola@yahoo.com"
  52   return 1
  53
  54   # We need a little change in aster
  55   cd ${srcdir}
  56   bsdtar -xf ${srcdir}/${_pkgnamesrc}-full-src-${pkgver}/SRC/${_pkgnamesrc}-src-${pkgver}-1.noarch.tar.gz
  57   rm -rf ${srcdir}/$pkgname-full-src-${pkgver}/SRC/${_pkgnamesrc}-src-${pkgver}-1.noarch.tar.gz
  58   mv STA${_pkgvershort} PAR${_pkgvershort}
  59   bsdtar -czf ${srcdir}/${_pkgnamesrc}-full-src-${pkgver}/SRC/${_pkgnamesrc}-src-${pkgver}-1.noarch.tar.gz PAR${_pkgvershort}
  60   rm -rf ${srcdir}/PAR${_pkgvershort}
  61
  62   cd ${srcdir}/${_pkgnamesrc}-full-src-${pkgver}
  63
  64   msg "-- Modify source code and sets variables --"
  65
  66   patch -Np1 -i ${srcdir}/${_pkgnamesrc}-${pkgver}.diff
  67
  68   # Modify setup.py: No question to stop compilation
  69   sed -e "s|should_continue()|#should_continue()|g" \
  70       -i setup.py
  71
  72   sed -e "s|rep = should_continue()|#rep = should_continue()|" \
  73       -i check_compilers.py
  74
  75   # Modify setup.cfg
  76   sed -e "s|/opt/aster|${pkgdir}$_installdir|" \
  77       -e "s|PREFER_SHARED_LIBS=False|PREFER_SHARED_LIBS=True|" \
  78       -e "s|PREFER_COMPILER = 'Intel'|PREFER_COMPILER = 'GNU'|" \
  79       -e "s|_install_omniORB   = True|#_install_omniORB   = True|" \
  80       -e "s|_install_omniORBpy = True|#_install_omniORBpy = True|" \
  81       -e "s|_install_pylotage  = True|#_install_pylotage  = True|" \
  82       -i setup.cfg
  83
  84   echo "_install_hdf5 = False" >> setup.cfg
  85   echo "HOME_HDF='/usr'" >> setup.cfg
  86   echo "_install_med = False" >> setup.cfg
  87   echo "HOME_MED='/usr'" >> setup.cfg
  88   echo "_install_tcl = False" >> setup.cfg
  89   echo "_install_tk  = False" >> setup.cfg
  90   echo "HOME_TCL_TK='/usr'" >> setup.cfg
  91   echo "_install_Numeric = False" >> setup.cfg
  92   echo "_install_gmsh = False" >> setup.cfg
  93   echo "_install_gmsh2 = False" >> setup.cfg
  94   echo "_install_gibi = False" >> setup.cfg
  95   echo "_install_grace = False" >> setup.cfg
  96   echo "XMGRACE = 'xmgrace'" >> setup.cfg
  97   echo "_install_homard = False" >> setup.cfg
  98   echo "_install_Pmw = False" >> setup.cfg
  99   echo "_install_eficas = False" >> setup.cfg
 100   echo "_install_astk = False" >> setup.cfg
 101   echo "_install_astk_serv = False" >> setup.cfg
 102   echo "_install_metis = False" >> setup.cfg
 103   echo "HOME_METIS='/opt/metis-edf'" >> setup.cfg
 104   echo "_install_omniORB = False" >> setup.cfg
 105   echo "_install_omniORBpy = False" >> setup.cfg
 106   echo "_install_pylotage = False" >> setup.cfg
 107   echo "_install_crpcrs = False" >> setup.cfg
 108   echo "_install_aster_Linux = False" >> setup.cfg
 109   echo "_install_scotch  = False" >> setup.cfg
 110   echo "HOME_SCOTCH = '/usr'" >> setup.cfg
 111   echo "HOME_ZMAT = ''" >> setup.cfg
 112   echo "HOME_MPI = '${_mpich2dir}'" >> setup.cfg
 113   echo "_install_mumps = False" >> setup.cfg
 114   echo "HOME_MUMPS = '/usr'" >> setup.cfg
 115   echo "MUMPSLIB = '-ldmumps -lzmumps -lmumps_common -lesmumps -lfax -lsymbol -ldof -lorder -lgraph -lscotch -lscotcherr -lcommon -lpord -lscalapack -llapack -lblacs -lblacsf77 -lblacs -lmetis -L${_mpich2dir}/lib -lmpich'" >> setup.cfg
 116   mkdir -p ${pkgdir}${_installdir}/PAR${_pkgvershort}/include_mumps
 117   for _FILE in cmumps_root.h cmumps_struc.h dmumps_root.h dmumps_struc.h smumps_root.h smumps_struc.h zmumps_root.h zmumps_struc.h
 118   do
 119     sed -e "s|INTEGER |INTEGER*4 |g" -e "s|INTEGER,|INTEGER*4,|g" < /usr/include/${_FILE} > ${pkgdir}${_installdir}/PAR${_pkgvershort}/include_mumps/${_FILE}
 120   done
 121   echo "INCLUDE_MUMPS='${pkgdir}${_installdir}/PAR${_pkgvershort}/include_mumps'" >> setup.cfg
 122   echo "BLASLIB='/usr'" >> setup.cfg
 123   echo "LAPACKLIB='/usr'" >> setup.cfg
 124   echo "GZIP='/bin/gzip'" >> setup.cfg
 125   echo "SHELL_EXECUTION='/bin/sh'" >> setup.cfg
 126   echo "EDITOR='$_editor'" >> setup.cfg
 127
 128   echo "CC='${_mpich2dir}/bin/mpicc'" >> setup.cfg
 129   echo "F77='${_mpich2dir}/bin/mpif77'" >> setup.cfg
 130   echo "F90='${_mpich2dir}/bin/mpif90'" >> setup.cfg
 131   echo "CXX='${_mpich2dir}/bin/mpicxx'" >> setup.cfg
 132   echo "LD='${_mpich2dir}/bin/mpicc'" >> setup.cfg
 133
 134   echo "LDFLAGS='-lstdc++ $LDFLAGS'" >> setup.cfg
 135   if [ "$CARCH" = "x86_64" ]; then
 136     echo "FFLAGS='-ffixed-line-length-0 -fdefault-double-8 -fdefault-integer-8 -fdefault-real-8 $FFLAGS'" >> setup.cfg
 137     echo "FFLAGS_DBG='-g -ffixed-line-length-0 -fdefault-double-8 -fdefault-integer-8 -fdefault-real-8 $FFLAGS'" >> setup.cfg
 138     echo "F90FLAGS='-ffixed-line-length-0 -x f77-cpp-input -fdefault-double-8 -fdefault-integer-8 -fdefault-real-8 -I/usr/include -I${_mpich2dir}/include $FFLAGS'" >> setup.cfg
 139     echo "F90FLAGS_DBG='-g -ffixed-line-length-0 -x f77-cpp-input -fdefault-double-8 -fdefault-integer-8 -fdefault-real-8 -I/usr/include -I${_mpich2dir}/include $FFLAGS'" >> setup.cfg
 140   else # i686
 141     echo "FFLAGS='-ffixed-line-length-0  $FFLAGS'" >> setup.cfg
 142     echo "FFLAGS_DBG='-g -ffixed-line-length-0 $FFLAGS'" >> setup.cfg
 143     echo "F90FLAGS='-xf77-cpp-input -ffixed-line-length-0 -I/usr/include -I${_mpich2dir}/include $FFLAGS'" >> setup.cfg
 144     echo "F90FLAGS_DBG='-g -xf77-cpp-input -ffixed-line-length-0 -I/usr/include -I${_mpich2dir}/include $FFLAGS'" >> setup.cfg
 145   fi
 146   echo "CFLAGS='-fno-stack-protector -DH5_USE_16_API $CFLAGS'" >> setup.cfg
 147   echo "CFLAGS_DBG='-g -fno-stack-protector -DH5_USE_16_API $CFLAGS'" >> setup.cfg
 148   echo "CPPFLAGS='-DH5_USE_16_API $CXXFLAGS'" >> setup.cfg
 149   echo "CXXFLAGS='-DH5_USE_16_API $CXXFLAGS'" >> setup.cfg
 150   echo "MATH_LIST = ['blas', 'lapack', 'gfortran']">> setup.cfg
 151
 152   sed -e "s|STA|PAR|" \
 153       -i setup.py
 154   sed -e "s|STA|PAR|" \
 155       -i products.py
 156
 157   /usr/bin/python /usr/lib/python$_pythonver/compileall.py ./
 158   /usr/bin/python -O /usr/lib/python$_pythonver/compileall.py ./
 159
 160   mkdir -p ${pkgdir}/${_astkdir}
 161   cp -rf ${_astkdir}/* ${pkgdir}/${_astkdir}
 162   cp ${_astkdir}/../aster-mpihosts ${pkgdir}${_astkdir}/../
 163   for _FILE in `grep -R -l "$_installdir" ${pkgdir}/${_astkdir}/*` ${pkgdir}${_astkdir}/../mpi_hostfile
 164   do
 165         sed -e "s|$_installdir|$pkgdir$_installdir|g" \
 166             -i ${_FILE}
 167   done
 168   for _DIR in bin lib unittest
 169   do
 170     python /usr/lib/python${_pythonver}/compileall.py -f ${pkgdir}${_astkdir}/ASTK_SERV/${_DIR}
 171     python -O /usr/lib/python${_pythonver}/compileall.py -f ${pkgdir}${_astkdir}/ASTK_SERV/${_DIR}
 172   done
 173
 174   msg "--- Builds Code_Ater ---"
 175
 176   python setup.pyo --aster_root=${pkgdir}$_installdir install aster
 177
 178   chmod -x ${pkgdir}$_installdir/PAR$_pkgvershort/materiau/A42_REF_A.NOMI
 179
 180   echo "HDF5_DISABLE_VERSION_CHECK=1" >> ${pkgdir}$_installdir/PAR$_pkgvershort/profile.sh
 181
 182   for _FILE in astout.export forma01a.export
 183   do
 184     sed -e "s|${pkgdir}||g" \
 185         -e 's|P mode astout|P mode interactif|' \
 186         -e 's|P mode forma01a|P mode interactif|' \
 187         -i ${pkgdir}$_installdir/PAR${_pkgvershort}/${_FILE}
 188   done
 189   for _FILE in Makefile config.txt
 190   do
 191     sed -e "s|${pkgdir}||g" \
 192         -i ${pkgdir}${_installdir}/PAR${_pkgvershort}/${_FILE}
 193   done
 194   sed -e "s|cat ./fort.15 ./ficode|cat ./ficode|"       \
 195       -i ${pkgdir}$_installdir/PAR$_pkgvershort/bibpyt/Execution/E_SUPERV.py
 196
 197   touch ${pkgdir}$_installdir/PAR$_pkgvershort/etude/forma01a.17
 198
 199   rm -rf ${pkgdir}${_installdir}/.postinst
 200   rm -rf ${pkgdir}${_astkdir}
 201   rm -rf ${pkgdir}${_installdir}/aster-mpihosts
 202
 203   for _FILE in bibpyt commande
 204   do
 205     python /usr/lib/python$_pythonver/compileall.py -f ${pkgdir}${_installdir}/PAR${_pkgvershort}/${_FILE}
 206     python -O /usr/lib/python$_pythonver/compileall.py -f ${pkgdir}${_installdir}/PAR${_pkgvershort}/${_FILE}
 207   done
 208
 209   for _FILE in `find $pkgdir/ -name "*.o"`
 210   do
 211     rm -f ${_FILE}
 212   done
 213   # Removes files with wrong permission
 214   rm -rf /tmp/astk_*
 215 }
 216 md5sums=('d28a1aee23413239166e77d4e934395a'
 217          '9859a21a710d006009d1491dc6b15316')