1 # Maintainer: Stephen A Smith <blackrim at gmail dot com>
2 # Contributor: Mick Elliot <micke at sfu dot ca>
8 pkgdesc="Randomized Axelerated Maximum Likelihood for sequential and parallel inference of large phylogenetic trees"
10 url="http://wwwkramer.in.tum.de/exelixis/software.html"
13 conflicts=('raxml-mpi')
14 source=(http://wwwkramer.in.tum.de/exelixis/countSource726.php http://icwww.epfl.ch/~stamatak/index-Dateien/countManual7.0.4.php)
15 md5sums=('252b690a163c0569cccf219a03b10f64' 'f366e3092b238e2ce89580393f2cb71e')
18 cd $startdir/src/RAxML-$pkgver
19 make -f Makefile.SSE3.gcc clean
20 make -f Makefile.SSE3.gcc || return 1
21 make -f Makefile.SSE3.PTHREADS.gcc clean
22 make -f Makefile.SSE3.PTHREADS.gcc || return 1
23 install -D -m755 raxmlHPC-SSE3 $startdir/pkg/usr/bin/raxmlHPC-SSE3
24 install -D -m755 raxmlHPC-PTHREADS-SSE3 $startdir/pkg/usr/bin/raxmlHPC-PTHREADS-SSE3
25 mv ../countManual7.0.4.php ../RAxML-Manual.7.0.4.pdf
26 install -D -m644 ../RAxML-Manual.7.0.4.pdf $startdir/pkg/usr/share/doc/$pkgname/RAxML-Manual.7.0.4.pdf
27 echo "Manual is located at /usr/share/doc/$pkgname/RAxML-Manual.7.0.4.pdf"