ewah/ewok.h

   1 /**
   2  * Copyright 2013, GitHub, Inc
   3  * Copyright 2009-2013, Daniel Lemire, Cliff Moon,
   4  *      David McIntosh, Robert Becho, Google Inc. and Veronika Zenz
   5  *
   6  * This program is free software; you can redistribute it and/or
   7  * modify it under the terms of the GNU General Public License
   8  * as published by the Free Software Foundation; either version 2
   9  * of the License, or (at your option) any later version.
  10  *
  11  * This program is distributed in the hope that it will be useful,
  12  * but WITHOUT ANY WARRANTY; without even the implied warranty of
  13  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  14  * GNU General Public License for more details.
  15  *
  16  * You should have received a copy of the GNU General Public License
  17  * along with this program; if not, write to the Free Software
  18  * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
  19  */
  20 #ifndef __EWOK_BITMAP_H__
  21 #define __EWOK_BITMAP_H__
  22
  23 #ifndef ewah_malloc
  24 #       define ewah_malloc xmalloc
  25 #endif
  26 #ifndef ewah_realloc
  27 #       define ewah_realloc xrealloc
  28 #endif
  29 #ifndef ewah_calloc
  30 #       define ewah_calloc xcalloc
  31 #endif
  32
  33 typedef uint64_t eword_t;
  34 #define BITS_IN_WORD (sizeof(eword_t) * 8)
  35
  36 /**
  37  * Do not use __builtin_popcountll. The GCC implementation
  38  * is notoriously slow on all platforms.
  39  *
  40  * See: http://gcc.gnu.org/bugzilla/show_bug.cgi?id=36041
  41  */
  42 static inline uint32_t ewah_bit_popcount64(uint64_t x)
  43 {
  44         x = (x & 0x5555555555555555ULL) + ((x >>  1) & 0x5555555555555555ULL);
  45         x = (x & 0x3333333333333333ULL) + ((x >>  2) & 0x3333333333333333ULL);
  46         x = (x & 0x0F0F0F0F0F0F0F0FULL) + ((x >>  4) & 0x0F0F0F0F0F0F0F0FULL);
  47         return (x * 0x0101010101010101ULL) >> 56;
  48 }
  49
  50 /* __builtin_ctzll was not available until 3.4.0 */
  51 #if defined(__GNUC__) && (__GNUC__ > 3 || (__GNUC__ == 3  && __GNUC_MINOR > 3))
  52 #define ewah_bit_ctz64(x) __builtin_ctzll(x)
  53 #else
  54 static inline int ewah_bit_ctz64(uint64_t x)
  55 {
  56         int n = 0;
  57         if ((x & 0xffffffff) == 0) { x >>= 32; n += 32; }
  58         if ((x &     0xffff) == 0) { x >>= 16; n += 16; }
  59         if ((x &       0xff) == 0) { x >>=  8; n +=  8; }
  60         if ((x &        0xf) == 0) { x >>=  4; n +=  4; }
  61         if ((x &        0x3) == 0) { x >>=  2; n +=  2; }
  62         if ((x &        0x1) == 0) { x >>=  1; n +=  1; }
  63         return n + !x;
  64 }
  65 #endif
  66
  67 struct ewah_bitmap {
  68         eword_t *buffer;
  69         size_t buffer_size;
  70         size_t alloc_size;
  71         size_t bit_size;
  72         eword_t *rlw;
  73 };
  74
  75 typedef void (*ewah_callback)(size_t pos, void *);
  76
  77 struct ewah_bitmap *ewah_pool_new(void);
  78 void ewah_pool_free(struct ewah_bitmap *self);
  79
  80 /**
  81  * Allocate a new EWAH Compressed bitmap
  82  */
  83 struct ewah_bitmap *ewah_new(void);
  84
  85 /**
  86  * Clear all the bits in the bitmap. Does not free or resize
  87  * memory.
  88  */
  89 void ewah_clear(struct ewah_bitmap *self);
  90
  91 /**
  92  * Free all the memory of the bitmap
  93  */
  94 void ewah_free(struct ewah_bitmap *self);
  95
  96 int ewah_serialize_to(struct ewah_bitmap *self,
  97                       int (*write_fun)(void *out, const void *buf, size_t len),
  98                       void *out);
  99 int ewah_serialize(struct ewah_bitmap *self, int fd);
 100 int ewah_serialize_native(struct ewah_bitmap *self, int fd);
 101
 102 int ewah_deserialize(struct ewah_bitmap *self, int fd);
 103 int ewah_read_mmap(struct ewah_bitmap *self, const void *map, size_t len);
 104
 105 uint32_t ewah_checksum(struct ewah_bitmap *self);
 106
 107 /**
 108  * Logical not (bitwise negation) in-place on the bitmap
 109  *
 110  * This operation is linear time based on the size of the bitmap.
 111  */
 112 void ewah_not(struct ewah_bitmap *self);
 113
 114 /**
 115  * Call the given callback with the position of every single bit
 116  * that has been set on the bitmap.
 117  *
 118  * This is an efficient operation that does not fully decompress
 119  * the bitmap.
 120  */
 121 void ewah_each_bit(struct ewah_bitmap *self, ewah_callback callback, void *payload);
 122
 123 /**
 124  * Set a given bit on the bitmap.
 125  *
 126  * The bit at position `pos` will be set to true. Because of the
 127  * way that the bitmap is compressed, a set bit cannot be unset
 128  * later on.
 129  *
 130  * Furthermore, since the bitmap uses streaming compression, bits
 131  * can only set incrementally.
 132  *
 133  * E.g.
 134  *              ewah_set(bitmap, 1); // ok
 135  *              ewah_set(bitmap, 76); // ok
 136  *              ewah_set(bitmap, 77); // ok
 137  *              ewah_set(bitmap, 8712800127); // ok
 138  *              ewah_set(bitmap, 25); // failed, assert raised
 139  */
 140 void ewah_set(struct ewah_bitmap *self, size_t i);
 141
 142 struct ewah_iterator {
 143         const eword_t *buffer;
 144         size_t buffer_size;
 145
 146         size_t pointer;
 147         eword_t compressed, literals;
 148         eword_t rl, lw;
 149         int b;
 150 };
 151
 152 /**
 153  * Initialize a new iterator to run through the bitmap in uncompressed form.
 154  *
 155  * The iterator can be stack allocated. The underlying bitmap must not be freed
 156  * before the iteration is over.
 157  *
 158  * E.g.
 159  *
 160  *              struct ewah_bitmap *bitmap = ewah_new();
 161  *              struct ewah_iterator it;
 162  *
 163  *              ewah_iterator_init(&it, bitmap);
 164  */
 165 void ewah_iterator_init(struct ewah_iterator *it, struct ewah_bitmap *parent);
 166
 167 /**
 168  * Yield every single word in the bitmap in uncompressed form. This is:
 169  * yield single words (32-64 bits) where each bit represents an actual
 170  * bit from the bitmap.
 171  *
 172  * Return: true if a word was yield, false if there are no words left
 173  */
 174 int ewah_iterator_next(eword_t *next, struct ewah_iterator *it);
 175
 176 void ewah_or(
 177         struct ewah_bitmap *ewah_i,
 178         struct ewah_bitmap *ewah_j,
 179         struct ewah_bitmap *out);
 180
 181 void ewah_and_not(
 182         struct ewah_bitmap *ewah_i,
 183         struct ewah_bitmap *ewah_j,
 184         struct ewah_bitmap *out);
 185
 186 void ewah_xor(
 187         struct ewah_bitmap *ewah_i,
 188         struct ewah_bitmap *ewah_j,
 189         struct ewah_bitmap *out);
 190
 191 void ewah_and(
 192         struct ewah_bitmap *ewah_i,
 193         struct ewah_bitmap *ewah_j,
 194         struct ewah_bitmap *out);
 195
 196 /**
 197  * Direct word access
 198  */
 199 size_t ewah_add_empty_words(struct ewah_bitmap *self, int v, size_t number);
 200 void ewah_add_dirty_words(
 201         struct ewah_bitmap *self, const eword_t *buffer, size_t number, int negate);
 202 size_t ewah_add(struct ewah_bitmap *self, eword_t word);
 203
 204
 205 /**
 206  * Uncompressed, old-school bitmap that can be efficiently compressed
 207  * into an `ewah_bitmap`.
 208  */
 209 struct bitmap {
 210         eword_t *words;
 211         size_t word_alloc;
 212 };
 213
 214 struct bitmap *bitmap_new(void);
 215 void bitmap_set(struct bitmap *self, size_t pos);
 216 void bitmap_clear(struct bitmap *self, size_t pos);
 217 int bitmap_get(struct bitmap *self, size_t pos);
 218 void bitmap_reset(struct bitmap *self);
 219 void bitmap_free(struct bitmap *self);
 220 int bitmap_equals(struct bitmap *self, struct bitmap *other);
 221 int bitmap_is_subset(struct bitmap *self, struct bitmap *super);
 222
 223 struct ewah_bitmap * bitmap_to_ewah(struct bitmap *bitmap);
 224 struct bitmap *ewah_to_bitmap(struct ewah_bitmap *ewah);
 225
 226 void bitmap_and_not(struct bitmap *self, struct bitmap *other);
 227 void bitmap_or_ewah(struct bitmap *self, struct ewah_bitmap *other);
 228 void bitmap_or(struct bitmap *self, const struct bitmap *other);
 229
 230 void bitmap_each_bit(struct bitmap *self, ewah_callback callback, void *data);
 231 size_t bitmap_popcount(struct bitmap *self);
 232
 233 #endif