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descriptionAnalysis modules for ITAG (International Tomato Annotation Group) pipelines
homepage URLhttp://solgenomics.net
repository URLhttps://github.com/solgenomics/ITAG-analyses.git
ownerjonathan@leto.net
last changeWed, 26 Jan 2011 20:22:36 +0000 (26 12:22 -0800)
mirror URLgit://repo.or.cz/ITAG-analyses.git
https://repo.or.cz/ITAG-analyses.git
ssh://git@repo.or.cz/ITAG-analyses.git
bundle infoITAG-analyses.git downloadable bundles
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shortlog
2011-01-26 Robert Buelsbugfix to mummer-based analyses, file locking over... master commit | commitdiff | tree | snapshot (tar.gz zip)
2011-01-17 Robert Buelsincrease minimum match length for tomato_bac matches... commit | commitdiff | tree | snapshot (tar.gz zip)
2011-01-11 Jonathan "Duke... Fix mummer_base test and make Test::Most a dep commit | commitdiff | tree | snapshot (tar.gz zip)
2011-01-11 Jonathan "Duke... Skip tests if blat is not available commit | commitdiff | tree | snapshot (tar.gz zip)
2011-01-05 Jonathan "Duke... skip tests if mummer is not present commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsset a 1500mb vmem estimate on mummer jobs to help avoid... commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsmake tomato_bacs be a mummer analysis instead of blat commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsadd support in mummer_base for munging gff3 commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelscorrect gff-version header in mummer gff3 output commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsunecessary use in itag1_ref commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsdon't put empty Alias attrs into bac match gff3 commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelstweak mummer base analysis for performance commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelspre-split query seqs instead of splitting over and... commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsto fit mummer into memory, further subdivide mummer... commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsfix addition of marker aliases in SGN marker alignments commit | commitdiff | tree | snapshot (tar.gz zip)
2010-12-10 Robert Buelsrefactory cached-query-file code into local_cluster_bas... commit | commitdiff | tree | snapshot (tar.gz zip)
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Analysis modules for ITAG (International Tomato Annotation Group) pipelines