modified: spffq.py
[GalaxyCodeBases.git] / etc / gatk-wdl / 
treede457c15fb81eec59118f1463550ad9678e8e6ca
drwxr-xr-x   ..
-rw-r--r-- 7 .gitignore
-rw-r--r-- 5967 FullSomaticPipeline.json
-rw-r--r-- 8710 FullSomaticPipeline.wdl
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-rw-r--r-- 231 Makefile
-rw-r--r-- 19155 ReadMe.md
drwxr-xr-x - cnv_somatic
-rw-r--r-- 1742 cnv_somatic_pair_workflow.b38.inputs.json
-rw-r--r-- 44737 cnv_somatic_pair_workflow.wdl
-rw-r--r-- 999 cnv_somatic_panel_workflow.b38.inputs.json
-rw-r--r-- 10012 cnv_somatic_panel_workflow.wdl
-rw-r--r-- 1110 cromwell.conf
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drwxr-xr-x - fm2artix
drwxr-xr-x - fm2gatk
-rw-r--r-- 2608 germline1-haplotypecaller-gvcf-gatk4.hg38.wgs.inputs.json
-rw-r--r-- 7060 germline1-haplotypecaller-gvcf-gatk4.wdl
-rw-r--r-- 4411 germline2-joint-discovery-gatk4-local.hg38.wgs.inputs.json
-rw-r--r-- 31076 germline2-joint-discovery-gatk4-local.wdl
-rw-r--r-- 4710 mutect2.bgi.inputs.json
-rw-r--r-- 48436 mutect2.wdl
-rw-r--r-- 1941 paired-fastq-to-unmapped-bam.inputs.json
-rw-r--r-- 4484 paired-fastq-to-unmapped-bam.wdl
-rw-r--r-- 5599 processing-for-variant-discovery-gatk4.hg38.wgs.inputs.json
-rw-r--r-- 21127 processing-for-variant-discovery-gatk4.wdl