lispstat.asd

   1 ;;  -*- mode: lisp -*-
   2 ;;; Copyright (c) 2005--2008, by AJ Rossini <blindglobe@gmail.com>
   3 ;;; ASDF packaging for CommonLisp Stat
   4 ;;; License: BSD, see the top level directory file LICENSE for details.
   5 ;;; Time-stamp: <2008-07-22 12:15:34 tony>
   6 ;;; Created:    <2005-05-30 17:09:47 blindglobe>
   7
   8 (in-package :cl-user)
   9
  10 (defvar *lispstat-home-dir*
  11   (directory-namestring
  12    (truename (asdf:system-definition-pathname :lispstat)))
  13   "Value considered \"home\" for our data")
  14
  15 #|
  16   (setf *lispstat-home-dir*
  17       (directory-namestring (truename (asdf:system-definition-pathname
  18                                        :lispstat))))
  19 |#
  20
  21 (macrolet ((ls-dir (root-str)
  22              `(pathname (concatenate 'string
  23                                      (namestring *lispstat-home-dir*) ,root-str)))
  24
  25            (ls-defdir (target-dir-var  root-str)
  26              `(defvar ,target-dir-var (ls-dir ,root-str))))
  27
  28   ;; reminder of testing
  29   ;;(macroexpand '(ls-defdir *lispstat-asdf-dir* "ASDF"))
  30   ;;(macroexpand-1 '(ls-defdir *lispstat-asdf-dir* "ASDF"))
  31   ;;(macroexpand-1 '(ls-dir "ASDF"))
  32
  33   (ls-defdir *lispstat-asdf-dir* "ASDF/")
  34   (ls-defdir *lispstat-data-dir* "data/")
  35   (ls-defdir *lispstat-external-dir* "external/")
  36   (ls-defdir *lispstat-examples-dir* "examples/"))
  37
  38 (pushnew *lispstat-asdf-dir* asdf:*central-registry*)
  39 ;; (pushnew #p"C:/Lisp/libs/" asdf-util:*source-dirs* :test #'equal) ; eg for Microsoft
  40
  41 ;;; back to our regularly scheduled work...
  42 ;;; We should not need these, I think, but?
  43 ;; (asdf:oos 'asdf:compile-op :cffi)            ;; FFI
  44 ;; (asdf:oos 'asdf:compile-op :lift)            ;; Unit Testing
  45 ;; (asdf:oos 'asdf:load-op :cffi)            ;; FFI
  46 ;; (asdf:oos 'asdf:load-op :lift)            ;; Unit Testing
  47
  48 ;;; MAJOR HACK, FIXME!
  49 ;;(load "/media/disk/Desktop/sandbox/matlisp.git/start.lisp")
  50
  51 (in-package :cl-user)
  52
  53 (defpackage #:lispstat-system
  54     (:use :common-lisp :asdf))
  55
  56 (in-package #:lispstat-system)
  57
  58 ;;; To avoid renaming everything from *.lsp to *.lisp...
  59 ;;; borrowed from Cyrus Harmon's work, for example for the ch-util.
  60 ;;; NOT secure against serving multiple architectures/hardwares from
  61 ;;; the same file system (i.e. PPC and x86 would not be
  62 ;;; differentiated).
  63
  64 (defclass lispstat-lsp-source-file (cl-source-file) ())
  65 (defparameter *fasl-directory*
  66    (make-pathname :directory '(:relative
  67                                #+sbcl "sbcl-fasl"
  68                                #+openmcl "openmcl-fasl"
  69                                #+cmu "cmucl-fasl"
  70                                #+clisp "clisp-fasl"
  71                                #-(or sbcl openmcl clisp cmucl) "fasl"
  72                                )))
  73
  74
  75 ;;; Handle Luke's *.lsp suffix
  76 (defmethod source-file-type ((c lispstat-lsp-source-file) (s module)) "lsp")
  77 (defmethod asdf::output-files :around ((operation compile-op)
  78                                        (c lispstat-lsp-source-file))
  79   (list (merge-pathnames *fasl-directory*
  80                          (compile-file-pathname (component-pathname c)))))
  81 ;;; again, thanks to Cyrus for saving me time...
  82
  83
  84 (defsystem "lispstat"
  85   :version #.(with-open-file
  86                  (vers (merge-pathnames "version.lisp-expr" *load-truename*))
  87                (read vers))
  88   :author "A.J. Rossini <blindglobe@gmail.com>"
  89   :license "BSD"
  90   :description "CommonLispStat (CLS): A System for Statistical
  91   Computing with Common Lisp; based on CLS alpha1 by Luke Tierney
  92   <luke@stat.uiowa.edu> (apparently originally written when Luke was
  93   at CMU, on leave somewhere?).   Last touched by him in 1991, then in
  94   2005--2008."
  95   :serial t
  96 <<<<<<< HEAD:lispstat.asd
  97   :depends-on (:cffi  :lift :lisp-matrix) ;; need a matrix library
  98   :components ((:static-file "version" :pathname #p"version.lisp-expr")
  99 =======
 100   :depends-on (:cffi :lift) ;; need a matrix library
 101   :components ((:static-file "version" :pathname #p"version.lisp-expr")
 102                (:module "proto-objects"
 103                         :pathname "src/objsys/"
 104                         :components ((:lispstat-lsp-source-file "lsobjects")))
 105
 106                (:lispstat-lsp-source-file "cffiglue")
 107                (:lispstat-lsp-source-file "defsys")
 108                (:lispstat-lsp-source-file "lstypes")
 109                (:lispstat-lsp-source-file "lsfloat")
 110
 111                (:lispstat-lsp-source-file "compound"
 112                                           :depends-on ("proto-objects"))
 113                (:lispstat-lsp-source-file "lsmacros"
 114                                           :depends-on ("compound"))
 115
 116                (:lispstat-lsp-source-file "dists"
 117                                           :depends-on ("cffiglue"
 118                                                        "lsmacros"))
 119
 120                (:lispstat-lsp-source-file "lsmath"
 121                                           :depends-on ("proto-objects"
 122                                                        "compound"
 123                                                        "lsmacros"
 124                                                        "lsfloat"))
 125
 126
 127                (:lispstat-lsp-source-file "matrices"
 128                                           :depends-on ("cffiglue"
 129                                                        "compound"))
 130
 131                (:lispstat-lsp-source-file "ladata"
 132                                           :depends-on ("cffiglue"
 133                                                        "defsys"
 134                                                        "lstypes"
 135                                                        "compound"
 136                                                        "matrices"))
 137
 138                (:lispstat-lsp-source-file "linalg"
 139                                           :depends-on ("cffiglue"
 140                                                        "lsmath"
 141                                                        "matrices"
 142                                                        "ladata"
 143                                                        "lsfloat"
 144                                                        "lstypes"
 145                                                        "compound"))
 146
 147                (:file "data" :depends-on ("proto-objects"
 148                                           "compound"
 149                                           "matrices"
 150                                           "linalg"))
 151
 152                ;; there is a circ reference which we need to solve.
 153                (:lispstat-lsp-source-file "lsbasics"
 154                                           :depends-on ("proto-objects"
 155                                                        "lstypes"
 156                                                        "lsmacros"
 157                                                        "lsfloat"
 158                                                        "matrices"
 159                                                        "linalg"
 160                                                        "dists"))
 161
 162                (:lispstat-lsp-source-file "statistics"
 163                                           :depends-on ("proto-objects"
 164                                                        "lsbasics"
 165                                                        "compound"
 166                                                        "ladata" "matrices" "linalg"
 167                                                        "lsmath"
 168                                                        "data" ))
 169
 170                (:file "optimize" :depends-on ("proto-objects"
 171                                               "cffiglue"
 172                                               "lstypes"
 173                                               "compound"
 174                                               "lsmath"
 175                                               "lsfloat"
 176                                               "lsbasics"
 177                                               "matrices"
 178                                               "ladata"
 179                                               "linalg"))
 180
 181                ;; Applications
 182                (:lispstat-lsp-source-file "regression"
 183                                           :depends-on ("proto-objects"
 184                                                        "lsbasics"
 185                                                        "compound"
 186                                                        "lsmath"
 187                                                        "matrices"
 188                                                        "linalg"
 189                                                        "statistics"))
 190 ;              (:lispstat-lsp-source-file "nonlin"
 191 ;                                         :depends-on ("regression"))
 192
 193 ;              (:lispstat-lsp-source-file "bayes"
 194 ;                                         :depends-on ("proto-objects"
 195 ;                                                      "lsmath"
 196 ;                                                      "dists"))
 197
 198
 199                (:file "ls-user" :depends-on ("proto-objects"
 200                                              "lsbasics"
 201                                              "compound"
 202                                              "dists"
 203                                              "lstypes"
 204                                              "lsfloat"
 205                                              "data"
 206                                              "lsmath"
 207                                              "matrices"
 208                                              "linalg"
 209                                              "statistics"
 210                                              "regression"))
 211
 212                (:file "unittests" :depends-on ("ls-user"))
 213                (:file "unittests-lstypes" :depends-on ("ls-user"
 214                                                        "lstypes"))
 215                ;; (:file "unittests-data-clos" :depends-on ("ls-user"))
 216                ;; (:file "unittests-regression" :depends-on ("ls-user"))
 217
 218 >>>>>>> refactored proto object system into src dir:lispstat.asd
 219                (:static-file "LICENSE")
 220                (:static-file "README")
 221
 222 <<<<<<< HEAD:lispstat.asd
 223                (:module "proto-objects"
 224                         :pathname "src/objsys/"
 225                         :components
 226                         ((:lispstat-lsp-source-file "lsobjects")))
 227
 228                (:module "lispstat-core"
 229                         :pathname "src/basics/"
 230                         :serial t
 231                         :depends-on ("proto-objects")
 232                         :components
 233                         ((:lispstat-lsp-source-file "defsys")
 234                          (:lispstat-lsp-source-file "lstypes")
 235                          (:lispstat-lsp-source-file "lsfloat")
 236
 237                          (:lispstat-lsp-source-file "compound")
 238                          (:lispstat-lsp-source-file "lsmacros"
 239                                                     :depends-on ("compound"))
 240
 241                          (:lispstat-lsp-source-file "lsmath"
 242                                                     :depends-on ("compound"
 243                                                                  "lsmacros"
 244                                                                  "lsfloat"))))
 245
 246                (:module
 247                 "numerics-internal"
 248                 :pathname "src/numerics/"
 249                 :depends-on ("proto-objects" "lispstat-core")
 250                 :components
 251                 ((:lispstat-lsp-source-file "cffiglue")
 252                  (:lispstat-lsp-source-file "dists"
 253                                             :depends-on ("cffiglue"))
 254                  (:lispstat-lsp-source-file "matrices"
 255                                             :depends-on ("cffiglue"))
 256                  (:lispstat-lsp-source-file "ladata"
 257                                             :depends-on ("cffiglue"
 258                                                          "matrices"))
 259                  (:lispstat-lsp-source-file "linalg"
 260                                             :depends-on ("cffiglue"
 261                                                          "matrices"
 262                                                          "ladata"))))
 263
 264                (:module
 265                 "stat-data"
 266                 :pathname "src/data/"
 267                 :depends-on ("proto-objects"
 268                              "lispstat-core"
 269                              "numerics-internal")
 270                 :components
 271                 (;; (:file "data-clos")
 272                  (:file "data")))
 273
 274                (:module
 275                 "cls-basics"
 276                 :pathname "src/basics/"
 277                 :depends-on ("proto-objects"
 278                              "lispstat-core"
 279                              "numerics-internal" )
 280                 :components
 281                 ((:lispstat-lsp-source-file "lsbasics")))
 282
 283                (:module
 284                 "describe"
 285                 :pathname "src/describe/"
 286                 :depends-on ("proto-objects"
 287                              "lispstat-core"
 288                              "numerics-internal"
 289                              "stat-data"
 290                              "cls-basics")
 291                 :components
 292                 ((:lispstat-lsp-source-file "statistics")))
 293
 294                (:module
 295                 "optimization"
 296                 :pathname "src/numerics/"
 297                 :depends-on ("proto-objects"
 298                              "lispstat-core"
 299                              "numerics-internal")
 300                 :components ((:file "optimize")))
 301
 302
 303                ;; Applications
 304                (:module
 305                 "stat-models"
 306                 :pathname "src/stat-models/"
 307                 :depends-on ("proto-objects"
 308                              "lispstat-core"
 309                              "numerics-internal"
 310                              "cls-basics"
 311                              "describe")
 312                 :components
 313                 ((:lispstat-lsp-source-file "regression")
 314                  ;; (:lispstat-lsp-source-file "nonlin"
 315                  ;;       :depends-on ("regression"))
 316                  ;; (:lispstat-lsp-source-file "bayes"
 317                  ;;       :depends-on ("proto-objects"
 318                  ;;                    "lsmath"
 319                  ;;                    "dists"))
 320                  ))
 321
 322                (:module
 323                 "lisp-stat-one"
 324                 :pathname "src/"
 325                 :depends-on  ("proto-objects"
 326                               "lispstat-core"
 327                               "numerics-internal"
 328                               "cls-basics"
 329                               "stat-data"
 330                               "describe"
 331                               "stat-models")
 332                 :components ((:file "ls-user")))
 333
 334                (:module
 335                  "lisp-stat-unittest"
 336                  :depends-on ( "lisp-stat-one" ) ;; shouldn't need :lift!
 337                  :pathname "src/unittests/"
 338                  :components ((:file "unittests")
 339                               (:file "unittests-lstypes")
 340                               ;;  "unittests-arrays.lisp"
 341                               ;;  "unittests-data-clos.lisp"
 342                               ;;  "unittests-proto.lisp"
 343                               ;;  "unittests-regression.lisp"
 344                               ))))
 345 =======
 346 ((:module
 347   "lisp-stat-testing"
 348   :pathname "src/unittests/"
 349   :components ((:file "unittests" :depends-on ("ls-user"))
 350                (:file "unittests-lstypes" :depends-on ("ls-user"
 351                                                        "lstypes")))))
 352
 353 |#
 354 >>>>>>> refactored proto object system into src dir:lispstat.asd