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Implemeted iterating lens-correction as described in Verena
2009-07-06
Stephan Saalfeld
Impl
e
met
e
d it
e
rating lens-correction as des
c
ribed in
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
S
t
ephan Saalfeld
T
ransformMeshMappin
g
sets Interpola
t
ionMet
h
od (tracking
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan Saalfeld
Distor
t
ionCorre
c
tion
T
a
sk fin
a
lly doe
s
t
h
e all to
a
ll
commit
|
commitdiff
|
tree
2009-06-29
Stephan Saalfeld
Ab
s
tractAffineTile2D can iden
t
i
fy the common
P
o
intMatc
h
es
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan
S
a
alfeld
Fixed transformmeshmappin
g
.
js test to confor
m
wit
h
.
.
.
commit
|
commitdiff
|
tree
2009-06-26
Steph
a
n
Saal
f
eld
A not
s
o important imp
r
oveme
n
t o
f
how poin
t
cor
r
e
s
p
o
ndences
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
t
ephan
S
aalfeld
Fixed accidentially inverted aff
i
ne concatenat
i
on
.
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalf
e
ld
Merge branch 'paint
a
bl
e
s
' o
f
ssh://saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfe
l
d
Apply in N
o
nLinearTransformMode
w
orks
.
It was tes
t
ed
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Sa
a
lfeld
F
i
x
e
d
X
ML parsing of
C
o
ordi
n
ateTransform
L
ists
.
They
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfeld
A
dded Tr
a
kEM2 extension of AffineM
o
del2D
commit
|
commitdiff
|
tree
2009-06-25
S
t
ephan Saalfeld
Fixed several bugs in
and extended Mo
v
in
g
LeastSquaresT
r
ansform:
commit
|
commitdiff
|
tree
2009-06-25
Steph
a
n
S
a
alfeld
Pat
c
h ca
l
cula
t
es the memory t
o
free for
r
ender
i
n
g a
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
te
p
han Saalfeld
Coordin
a
t
eTr
a
nsf
o
r
mL
i
st has a ge
n
eric parameter tha
t
.
.
.
commit
|
commitdiff
|
tree
2009-06-22
St
e
p
h
an
Saalfeld
Merg
e
branch 'paintables' of ss
h
://saa
l
feld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-20
Stephan Saalfeld
A
li
g
n
w
il
l
no
t
accep
t
models wi
t
h
less tha
n
7 inliers
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
Stephan Saalfeld
Al
i
gn will
not
acce
p
t models with les
s
than 7 inliers
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
St
e
phan Saalfeld
Workaround for a b
u
g
wh
i
ch wa
s
probab
l
y
i
ntr
o
duced
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Saalfeld
Merge bran
c
h 'paint
a
bles' o
f
ssh:/
/
sa
a
lfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Saalf
e
ld
K
e
e
p
Points in world
space
and corre
c
t for af
f
in
e
invarian
c
e
.
.
.
commit
|
commitdiff
|
tree
2009-06-16
Stephan Saalfeld
Keep Poi
n
ts in wo
r
ld s
p
ace and
corr
e
ct for aff
i
ne
invari
a
nce
.
.
.
commit
|
commitdiff
|
tree
2009-06-13
Ste
p
han Saalf
e
l
d
Added severa
l
T
ODOs
.
commit
|
commitdiff
|
tree
2009-06-12
S
t
ephan Saalfeld
Me
r
g
e branch 'pa
i
ntables' of s
s
h://
s
aalfeld@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
S
tephan Sa
a
lfeld
NonLinearTra
n
sform
M
ode c
a
n apply, but still it looks
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Ste
p
han Saalfeld
N
o
nLinearTran
s
f
o
rmMode
i
n progress
.
Pa
t
che
s
paint
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
S
t
ephan Sa
a
l
f
eld
Me
r
ge branch 'paintables'
o
f ssh://saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Ste
p
h
a
n Saa
l
f
e
ld
Temporary commit on NonLinearTransf
o
rmMode
.
.
.
more
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Stephan Sa
a
l
f
el
d
M
erge b
r
an
c
h
'p
a
intabl
e
s
'
o
f
ssh:
/
/saa
l
f
e
l
d
@re
p
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Stephan Saalfeld
Mer
g
e branch 'painta
b
les' of ssh://saal
f
eld@r
e
po
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-10
Step
h
an Saalfeld
M
e
rge branch 'p
a
intables' of
s
s
h://saalfeld@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-08
Stepha
n
Saalfeld
Fi
x
ed generics
.
commit
|
commitdiff
|
tree
2009-04-23
Stephan Saa
l
feld
Merge branch 'm
a
ste
r
' of ssh:/
/
saalfeld
@
repo
.
or
.
cz
.
.
.
commit
|
commitdiff
|
tree
2009-04-23
S
tephan Saa
l
feld
R
e
m
o
ved SIF
T
_Te
s
t
.
java
commit
|
commitdiff
|
tree
2009-04-23
Stephan Saal
f
e
ld
A
dded commen
t
t
o
Transfor
m
Mes
h
M
a
pping
commit
|
commitdiff
|
tree
2009-04-23
Ste
p
han Saalfel
d
Added s
o
me missing fi
n
al
st
a
tements in Tr
a
nsformMe
s
h
commit
|
commitdiff
|
tree
2009-04-23
S
t
e
phan Saalf
e
ld
U
se static f
i
elds for dialog
initializat
i
on in A
l
i
gnTa
s
k
.
commit
|
commitdiff
|
tree
2009-04-06
Stephan Saalf
e
ld
Fixed blend-a
l
pha
.
commit
|
commitdiff
|
tree
2009-04-03
Stepha
n
Saalfeld
Put align multi-l
a
yer mosaic in Tr
a
kEM2 shape and
inserted
.
.
.
commit
|
commitdiff
|
tree
2009-04-03
Stephan Saalfeld
Extended
TransformMesh
M
app
i
ng
t
o crea
t
e inve
r
se
l
y tr
a
nsfor
m
e
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Stephan
S
aalfeld
Merge
b
ranch 'ict'
o
f ssh
:
//saalfeld@repo
.
or
.
cz/s
r
v
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Ste
p
han Saalfeld
Multi-layer m
o
saick
i
ng wit
h
SIFT us
i
ng t
h
e pr
o
p
er
new
.
.
.
commit
|
commitdiff
|
tree
2009-03-30
S
tephan Saalfeld
Added
E
xception
Handling
f
or t
h
e (not yet pushed) changes in
commit
|
commitdiff
|
tree
2009-03-30
Stephan Sa
a
lf
e
ld
ARGB
-
images will
b
e loaded
a
s ARGB_PRE which s
p
eeds
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
S
t
e
p
h
an
Sa
a
lfeld
Fix
e
d the two
-
sided
e
xport of serialize
d
PointM
a
t
c
h
e
s
commit
|
commitdiff
|
tree
2009-03-05
Stephan Saalfeld
Merge
b
ranch 'unuid-m
i
pmaps' of
ss
h
:
/
/saa
l
feld@repo
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan
S
aalfe
l
d
Added c
l
one() meth
o
d to Co
o
rd
i
nateTransfo
r
m
a
nd al
l
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan Saalfeld
Added
b
ug report
t
o
T
ODO
commit
|
commitdiff
|
tree
2009-02-24
S
t
ephan Saalf
e
ld
Re-a
d
d
ed
51e17a
9
6
c
1cb3
3
f2eee7da6
7
743d25522f
f
f232c
commit
|
commitdiff
|
tree
2009-02-23
Ste
p
han Saalfeld
Merge
b
ran
c
h '
i
ct'
o
f ssh:/
/
sa
a
lfel
d
@
repo
.
o
r
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-13
Ste
p
han Saalfeld
Merge
branch 'ict' of ss
h
:
//s
a
alfeld
@
re
p
o
.
or
.
c
z/srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
S
tephan Saalfeld
M
e
rge bra
n
ch 'ict' o
f
s
s
h://saalfeld@repo
.
or
.
c
z
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stepha
n
Saalfeld
M
e
rge branch 'ict' of ssh
:
//sa
a
l
feld@repo
.
or
.
c
z
/srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saalfeld
Ad
d
ed metho
d
getC
o
ord
i
nateTransf
o
rmB
o
u
n
din
g
Box to
P
atch
commit
|
commitdiff
|
tree
2009-02-06
Stephan Saalfeld
Fix
e
d the CoordinateTr
a
nsf
o
rmList XML export
.
commit
|
commitdiff
|
tree
2009-02-06
Stephan
S
aalfeld
Added the m
e
thod app
e
ndCoordinateTra
n
sform to Pa
t
c
h
.
.
.
commit
|
commitdiff
|
tree
2009-02-03
S
t
ephan Saalfe
l
d
Updated TODO
commit
|
commitdiff
|
tree
2009-02-03
S
t
ephan Saalfeld
Comm
e
nt ma
k
eup
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saa
l
feld
M
e
r
ge bran
c
h 'i
c
t' into ict2
commit
|
commitdiff
|
tree
2009-02-02
Stepha
n
Saalfeld
Made boolean
parameters static
.
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
Added expla
n
ation o
f
what the
method does
.
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
A
d
d
ed makeVi
r
tualConn
e
ctions meth
o
d for AbstractAf
f
ineTi
l
e2D
.
commit
|
commitdiff
|
tree
2009-02-02
St
e
pha
n
Saalfel
d
S
tat
i
c Param objects
are p
u
blic
.
commit
|
commitdiff
|
tree
2009-01-28
Stephan Saal
f
eld
Replace
d
DBObject
.
getId() in
c
ache-
f
i
l
e
names
b
y DBO
b
jec
t
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
S
t
e
pha
n
Sa
a
lfeld
Deletes the affected ca
c
hed Poi
n
tMatches o
n
mipmap
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
S
tephan Saalf
e
l
d
A
dd
e
d Strin
g
g
e
tUniq
u
e
I
d
e
ntif
i
er() t
o
DBObject
.
The
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
Stephan Saalfeld
Merge branch 'ict'
o
f ssh:
/
/saalfeld@repo
.
o
r
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
Stephan Saalfel
d
Added a T
O
DO
commit
|
commitdiff
|
tree
2009-01-21
St
e
p
h
a
n
Saalfeld
Al
i
gn and AlignTask
c
ache extracted PointMatches
i
n
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfel
d
Merg
e
bra
n
c
h
'ict' of ssh
:
/
/
saalfeld@repo
.
o
r
.
c
z/sr
v
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan
Saalf
e
ld
Added che
c
king for
i
nter
r
uption in the
montag
e
-
m
ethod
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfeld
Fixed progress bar display
commit
|
commitdiff
|
tree
2009-01-17
Stephan S
a
al
f
eld
Linear layer alignment stops looping on inter
r
u
pt
i
on
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saal
f
eld
T
hread
s
in
A
lign finish looping o
n
interr
u
ption
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfeld
M
e
rge branch '
i
ct' of ss
h
:
//saalfeld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfeld
Line
a
r layer-a
l
ign
m
ent updated u
s
ing the mpicbg_
.
jar
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
phan Saalfeld
Use AlignTas
k
for mosaic a se
l
ect
i
on
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
p
han S
a
alfe
l
d
Minor History-ch
a
nges
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Saalfeld
Merge branc
h
'
i
ct
'
of ssh://saalf
e
ld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Step
h
an
Saalfel
d
Added Al
i
gnTask for the
h
igher logic of alignm
e
n
t
tas
k
s
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Saalfeld
M
e
r
g
e
b
ranc
h
'
ict' of ssh://saalfeld@repo
.
or
.
cz
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Ste
p
h
a
n
S
aalfeld
Made mpicbg in TrakEM2 b
m
picbg
.
trakem
2
in order to
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Saalf
e
ld
Merge
b
r
a
nch 'ict' of
s
s
h://saa
l
fel
d
@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
S
tephan Saalfeld
Pr
o
gres
s
with s
w
i
t
ching
t
o the ne
w
mpicbg_
.
jar
.
"
M
ontage
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Stephan Saalfeld
Merge
branch 'ict' of ssh:/
/
saalf
e
ld@repo
.
or
.
cz/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
St
e
phan
S
a
al
f
eld
Replac
e
d 64px minimal mipmap size
w
ith 32px
.
Removed
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Stephan Sa
a
lfeld
Split mpicbg int
o
mpicbg and
mp
i
cbg
.
t
ransform
commit
|
commitdiff
|
tree
2009-01-15
Stephan
S
aalfel
d
Merge br
a
nch
'
ict' o
f
ssh://saa
l
feld@rep
o
.
or
.
cz/sr
v
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
S
t
e
p
h
a
n
Saalfeld
Moved the mpic
b
g
.
trakem
2
package fro
m
the mpicbg sub
m
odule
.
.
.
commit
|
commitdiff
|
tree
2009-01-13
S
t
eph
a
n Sa
a
l
f
e
ld
Mer
g
e bra
n
c
h
'ict' of ssh://saalf
e
l
d@repo
.
or
.
cz/sr
v
.
.
.
commit
|
commitdiff
|
tree
2009-01-13
Ste
p
han Sa
a
lfeld
P
ro
g
ress with fu
l
l transpare
n
cy support
.
commit
|
commitdiff
|
tree
2009-01-07
Stephan Saa
l
f
e
ld
Added ini
.
trakem2
.
persistence
.
FSLo
a
der
.
meanResizeInHalf
.
.
.
commit
|
commitdiff
|
tree
2008-12-14
Stephan Saalfeld
Fix "black bord
e
r
s
"
by us
i
ngthe s
a
me mappoing scheme
.
.
.
commit
|
commitdiff
|
tree
2008-12-12
Steph
a
n Saalfeld
F
irst
c
ompil
i
n
g, but
no
t
y
et tested d
r
a
f
t
for creating
.
.
.
commit
|
commitdiff
|
tree
2007-12-03
Stephan
- StichingT
E
M
.
stichT
o
pL
e
ft() uses the imported pose
.
.
.
commit
|
commitdiff
|
tree
2007-12-03
Ste
p
han
- f
i
xed t
h
e grid-import, that did no
t
use the actual
.
.
.
commit
|
commitdiff
|
tree
2007-11-22
Step
h
an
- fixed coor
d
inate
s
p
ace
bu
g
s in TModel2D
.
minimize
.
.
.
commit
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commitdiff
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tree
2007-11-22
S
t
ephan
M
e
rge branch 'm
a
ste
r
' of saalfeld@instar:/
b
a
c
kup
/
repo
s
.
.
.
commit
|
commitdiff
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tree
2007-11-22
Ste
p
h
an
Mer
g
e br
a
nch 'mast
e
r
'
of saalfeld@in
s
tar:
/
backup
/
re
p
o
s
.
.
.
commit
|
commitdiff
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tree
2007-11-21
Stephan
Merge branch
'
m
ast
e
r'
o
f s
a
alfeld@instar:/backup/repos
.
.
.
commit
|
commitdiff
|
tree
2007-11-19
Stephan
Merge branch 'maste
r
' of saalfeld@instar:/backup/repos
.
.
.
commit
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commitdiff
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