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Implemeted iterating lens-correction as described in Verena
2009-07-06
Step
h
an Saalfeld
I
mplemeted iterating lens-
c
orrection as des
c
ribed in
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
S
t
ep
h
an
S
aalfeld
TransformMes
h
Mappin
g
sets InterpolationMethod (tracking
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan Saalf
e
ld
DistortionC
o
rrectionTask finally does th
e
all
to all
commit
|
commitdiff
|
tree
2009-06-29
Ste
p
han
Saalf
e
ld
AbstractAffineTile
2
D
can ide
n
tify the co
m
mon PointMatc
h
es
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan Saalf
e
ld
Fixed tr
a
nsform
m
e
shmapp
i
ng
.
js test to conform wi
t
h
.
.
.
commit
|
commitdiff
|
tree
2009-06-26
Stephan Saalfel
d
A no
t
s
o
i
mporta
n
t improv
e
ment of
h
ow point correspondences
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfeld
Fixe
d
accid
e
ntially invert
e
d affine co
n
catenation
.
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Step
h
a
n
S
aalfeld
Merg
e
branc
h
'
paintables' o
f
ssh://saalfeld@r
e
po
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Step
h
an Saalfel
d
A
pply in NonLinearTransformMode wo
r
ks
.
It was tested
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
St
e
p
han Saa
l
feld
Fi
x
ed XML parsin
g
of Co
o
rdina
t
e
Transfo
r
mLists
.
They
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfeld
Ad
d
ed
T
r
akEM2 extension
of A
f
fineModel2D
commit
|
commitdiff
|
tree
2009-06-25
St
e
phan Saalfeld
Fixed s
e
ver
a
l bugs in and ext
e
nded
M
ovingLeastSquaresT
r
ans
f
or
m
:
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfeld
Patch calculates t
h
e memory t
o
free for rendering a
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
t
ephan Saalfeld
Coord
i
nateTransformList h
a
s a gener
i
c parameter
t
ha
t
.
.
.
commit
|
commitdiff
|
tree
2009-06-22
S
tepha
n
Saalfeld
Merge branc
h
'pa
i
ntables' of s
s
h:/
/
s
aalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-20
S
t
ep
h
an Saalf
e
ld
Align
w
ill not a
c
cept models with less than 7 inlie
r
s
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
Stephan Saalfel
d
Align will not acc
e
pt
m
odel
s
w
i
th less t
h
an 7 i
n
lier
s
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
Stephan Saalfeld
Workaround
f
o
r
a bu
g
which was probably
i
ntroduced
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Steph
a
n Saalfeld
M
e
r
g
e branch '
p
ai
n
tables' of ssh://s
a
a
l
feld@re
p
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Saalfeld
Kee
p
Points
in world space
and correct for
a
ffine invariance
.
.
.
commit
|
commitdiff
|
tree
2009-06-16
Stephan Saalfeld
Keep Points in wor
l
d s
p
ace
and co
r
rect f
o
r affi
n
e inva
r
iance
.
.
.
commit
|
commitdiff
|
tree
2009-06-13
Stephan
Sa
a
lfeld
Add
e
d sev
e
r
al T
O
DOs
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saalfeld
Merge branch 'paintabl
e
s' of ssh://saalf
e
ld@r
e
po
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
St
e
phan Saalf
e
l
d
NonLinea
r
Transfor
m
Mode can apply,
b
ut s
t
ill it looks
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saa
l
f
eld
N
onLinea
r
TransformMode
in p
r
ogress
.
Patc
h
es paint
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan
Saalfeld
Mer
g
e branch 'paintab
l
es
'
of ssh://saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
St
e
p
h
an S
a
alfeld
T
e
m
porary commit on Non
L
i
n
earTransf
o
rmMode
.
.
.
more
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Steph
a
n
Saalfeld
Merge branch 'paintables' o
f
ssh://saa
l
feld@re
p
o
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Stephan Saalfeld
Merg
e
branch '
p
aintab
l
es' of
ssh://saalfeld
@
repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-10
Stephan
Saalfeld
M
e
r
ge branch 'paintables' of
ssh://saalfeld@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-08
S
tephan Saalfeld
Fixed generics
.
commit
|
commitdiff
|
tree
2009-04-23
Stephan
S
aal
f
eld
Merge bra
n
ch 'master' of ssh
:
//saalfeld
@
r
e
po
.
or
.
c
z
.
.
.
commit
|
commitdiff
|
tree
2009-04-23
St
e
p
h
an Saalfel
d
Removed SIFT_Te
s
t
.
java
commit
|
commitdiff
|
tree
2009-04-23
Stephan Saalfeld
Added comment to TransformMeshM
a
pp
i
ng
commit
|
commitdiff
|
tree
2009-04-23
Stephan
Saalfeld
Add
e
d some missing
final statem
e
nts in T
r
ansformMesh
commit
|
commitdiff
|
tree
2009-04-23
St
e
p
h
a
n Saalfeld
Us
e
s
tatic f
i
elds fo
r
dia
l
o
g init
i
a
liz
a
tio
n
in Al
i
gnTas
k
.
commit
|
commitdiff
|
tree
2009-04-06
Stephan Saalfeld
F
ixed blend-alpha
.
commit
|
commitdiff
|
tree
2009-04-03
Stephan
S
aalfe
l
d
Put align mu
l
ti-
l
a
y
e
r
mo
s
aic in Tr
a
kEM2 s
h
ape
a
nd ins
e
r
t
ed
.
.
.
commit
|
commitdiff
|
tree
2009-04-03
Stephan Saalfeld
Extended Trans
f
ormMe
s
hMapping t
o
cr
e
a
te inve
r
sely transforme
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Stephan Saalfeld
Mer
g
e branch '
i
ct' of s
s
h:
/
/saa
l
f
eld@r
e
po
.
or
.
c
z/srv
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Stephan Saalfeld
Multi-layer mo
s
aickin
g
with SIFT using
t
he proper new
.
.
.
commit
|
commitdiff
|
tree
2009-03-30
Stephan S
a
al
f
eld
Added Exce
p
tion
Handling for the (
n
ot yet pushed
)
c
h
anges in
commit
|
commitdiff
|
tree
2009-03-30
St
e
phan Saalfel
d
ARGB-i
m
ag
e
s will be loade
d
as ARGB_PRE which s
p
eeds
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Ste
p
han Saalfe
l
d
Fixed
the two-sided export of serialized PointMatches
commit
|
commitdiff
|
tree
2009-03-05
Stephan Saalfeld
Merge branc
h
'unui
d
-
mip
m
aps' o
f
s
s
h://saalf
e
ld
@
rep
o
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan
S
aalf
e
ld
Add
e
d clon
e
() method
t
o
C
o
ordinateTransform and all
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Ste
p
han
Saalfeld
Adde
d
bug repo
r
t to TODO
commit
|
commitdiff
|
tree
2009-02-24
Stephan Sa
a
lfeld
Re-added 51e17a96c1cb33f2
e
ee7
d
a67743d255
2
2fff232c
commit
|
commitdiff
|
tree
2009-02-23
St
e
phan
S
aalfe
l
d
Merge branch
'
i
c
t' of ssh://saalf
e
ld@repo
.
or
.
cz/
s
r
v
.
.
.
commit
|
commitdiff
|
tree
2009-02-13
Stephan Saalfeld
Merg
e
branch 'ict' of ssh
:
//sa
a
l
feld@repo
.
or
.
cz/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saa
l
feld
Merge branch 'ict' of
s
s
h
://sa
a
lfeld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saalfeld
Merge branch 'ict' of ss
h
:
/
/saal
f
eld
@
re
p
o
.
or
.
cz/sr
v
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan
S
aalfeld
Ad
d
ed
me
t
ho
d
getCoordinateTransform
B
oundingBox to
P
a
tch
commit
|
commitdiff
|
tree
2009-02-06
Stephan Saalfeld
F
i
x
ed th
e
Co
o
rdinateTransformL
i
s
t XML exp
o
rt
.
commit
|
commitdiff
|
tree
2009-02-06
Stephan Sa
a
lfel
d
Added
t
he method appe
n
dCoordinateTra
n
sform t
o
Pat
c
h
.
.
.
commit
|
commitdiff
|
tree
2009-02-03
St
e
ph
a
n S
a
alfeld
Up
d
ated TODO
commit
|
commitdiff
|
tree
2009-02-03
S
t
e
phan Saalfeld
Comme
n
t
m
akeup
commit
|
commitdiff
|
tree
2009-02-02
Stephan
S
aal
f
eld
M
er
g
e branch 'ict'
i
nto ict2
commit
|
commitdiff
|
tree
2009-02-02
Steph
a
n Saalfeld
M
a
de boolean pa
r
ameters
s
ta
t
ic
.
commit
|
commitdiff
|
tree
2009-02-02
St
e
pha
n
Saalf
e
l
d
Added
e
xplanation
of what the method does
.
commit
|
commitdiff
|
tree
2009-02-02
Steph
a
n Saalfeld
Added makeVirtualConnections metho
d
for AbstractAffineTile2D
.
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
S
t
atic Param
o
b
j
e
cts
a
re public
.
commit
|
commitdiff
|
tree
2009-01-28
Stephan Saalfel
d
Replaced DBObject
.
getId() in c
a
che
-
file
names
b
y DBO
b
ject
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
S
teph
a
n Saalfeld
D
e
l
e
tes
t
he
a
ffec
t
e
d
cac
h
ed PointMatch
e
s on mipmap
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
Stephan Saalfeld
Added Strin
g
getU
n
i
q
ueIdentifier() to DBObject
.
T
he
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
St
e
ph
a
n Sa
a
lfe
l
d
Merge bra
n
c
h
'ict' o
f
ssh://saalfeld@rep
o
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
Stephan
Saalfeld
Added
a TODO
commit
|
commitdiff
|
tree
2009-01-21
Stephan Sa
a
lfeld
Align and Ali
g
nTask
cache ext
r
acted PointMat
c
hes
in
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
S
tephan Saalfeld
M
e
rge branch '
i
ct' of ssh://saalfeld@repo
.
or
.
cz/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
phan
S
aalfeld
Add
e
d che
c
ki
n
g f
o
r int
e
r
r
uption in the montage-m
e
thod
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saa
l
feld
Fixed
p
rogress bar
d
isplay
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfel
d
Lin
e
ar
layer alignmen
t
stops l
o
o
p
ing on
i
nterru
p
tion
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Step
h
an
S
aalfeld
Threads in Al
i
gn finish l
o
oping on int
e
rruption
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfeld
Mer
g
e branch 'i
c
t' of ssh://saalfeld@r
e
po
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
Stephan Saalfeld
Lin
e
ar layer-a
l
ignment updated using the mpicbg_
.
jar
.
commit
|
commitdiff
|
tree
2009-01-17
Ste
p
han Saalfe
l
d
U
se Alig
n
Task f
o
r
m
osaic a selection
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
phan S
a
alfeld
Minor Histo
r
y-
c
h
a
nges
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan
Saalfeld
Me
r
ge branch 'ic
t
'
o
f
ssh://sa
a
lfeld@
r
epo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stepha
n
Saalfeld
A
dded Ali
g
nTask f
o
r t
h
e highe
r
logi
c
of
a
lignment tasks
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Sa
a
lfeld
Merge
b
ranch 'ict' of ssh://
s
aalfeld@repo
.
or
.
cz
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan S
a
alfeld
M
ade
m
pi
c
bg in TrakEM2
b
mpicbg
.
t
rakem2 in order to
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stepha
n
Saalf
e
l
d
M
erge bran
c
h '
i
ct' o
f
s
s
h://saalfeld@repo
.
or
.
cz/s
r
v
.
.
.
commit
|
commitdiff
|
tree
2009-01-16
Stephan Saalfeld
P
r
o
gress
with switchin
g
t
o
the ne
w
mpi
c
bg_
.
jar
.
"Montage
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Stephan Saalfeld
Merg
e
bra
n
ch 'ict' of ss
h
:
//saalfeld@repo
.
or
.
c
z/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Stephan Saalfeld
Replaced 64p
x
minimal mi
p
map size with
3
2px
.
R
emoved
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
Ste
p
han Saalfeld
Sp
l
it mpicbg into mpicbg a
n
d
mpicbg
.
tra
n
sform
commit
|
commitdiff
|
tree
2009-01-15
Stephan
Saalfeld
Merge
branch 'ict' of
s
sh://saalfeld@re
p
o
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-15
St
e
pha
n
Saalfeld
M
o
ved the m
p
icb
g
.
tr
a
kem
2
package from the mpicbg su
b
mod
u
le
.
.
.
commit
|
commitdiff
|
tree
2009-01-13
Stephan
S
a
al
f
el
d
Merge branch
'ict' of ssh:
/
/saal
f
eld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-13
Ste
p
han Saal
f
eld
Pr
o
gr
e
ss wit
h
f
ull transparency su
p
p
o
rt
.
commit
|
commitdiff
|
tree
2009-01-07
S
t
e
phan S
a
a
l
f
eld
Added ini
.
trakem2
.
p
ersistence
.
FSLoader
.
m
e
a
nResizeInHalf
.
.
.
commit
|
commitdiff
|
tree
2008-12-14
Step
h
a
n S
a
alfeld
F
ix
"
black borders"
b
y us
i
ngthe same m
a
ppoing scheme
.
.
.
commit
|
commitdiff
|
tree
2008-12-12
Stephan
Saalf
e
ld
First c
o
mpilin
g
, bu
t
not yet test
e
d draf
t
for creating
.
.
.
commit
|
commitdiff
|
tree
2007-10-11
S
t
ephan Saa
l
feld
Uses
p
reprocessed
p
atch
e
s i
n
s
t
ead of the ori
g
inal 32bit
.
.
.
commit
|
commitdiff
|
tree
2007-10-04
Stephan
Saalfeld
M
e
r
g
e branch 'master'
of saalfeld@instar:/backu
p
/repos
.
.
.
commit
|
commitdiff
|
tree
2007-10-04
Stephan Saalfe
l
d
First working Monte-Carlo-Minimize
r
on
t
op o
f
SIFT
.
.
.
commit
|
commitdiff
|
tree
2007-09-22
St
e
p
h
an Saalfeld
M
erge br
a
n
c
h 'm
a
ster' of saa
l
feld@instar:/backup/repos
.
.
.
commit
|
commitdiff
|
tree
2007-09-22
Stepha
n
Saalfeld
M
e
rge branch 'master' of saa
l
feld@instar:/backup/repos
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2007-09-22
Stephan Saalf
e
ld
Merge branch
'
master' of saalf
e
ld@ins
t
a
r:/b
a
ck
u
p/repos
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2007-09-22
Stephan
Saalfeld
First st
e
ps towards the
Monte Car
l
o D
i
sp
l
a
c
e
ment
M
inimizer
.
.
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