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Version 2020.1
2020-03-03
Paul Bauer
Versio
n
2020
.
1
commit
|
commitdiff
|
tree
2020-03-03
Paul Baue
r
Alwa
y
s hash files when building
f
rom release tarball
commit
|
commitdiff
|
tree
2020-03-02
Paul
B
auer
Add Cuda build to g
i
tlab
CI
commit
|
commitdiff
|
tree
2020-03-02
P
aul
Bauer
Revert
"
R
emove fro
z
en atoms from
V
CM groups"
commit
|
commitdiff
|
tree
2020-03-02
Paul
B
auer
Remo
v
e
frozen atoms
from VCM g
r
oups
commit
|
commitdiff
|
tree
2020-02-28
Paul Bauer
Merge
bra
n
ch release-
2
019
into releas
e
-202
0
commit
|
commitdiff
|
tree
2020-02-28
Paul Bauer
Define all
CP
U
N
B
ker
n
els
commit
|
commitdiff
|
tree
2020-02-28
Paul Bauer
Version 2019
.
6
commit
|
commitdiff
|
tree
2020-02-25
Pau
l
Bauer
Avoid integer
o
verflow in
d
ispersion c
o
rre
c
tion
commit
|
commitdiff
|
tree
2020-02-25
P
a
ul Bauer
R
evert "Expose vsite coun
t
i
n
g"
commit
|
commitdiff
|
tree
2020-02-24
Paul Bauer
F
i
x clang-6 image
t
e
m
p
late
commit
|
commitdiff
|
tree
2020-01-29
P
aul Bauer
Wo
r
ka
r
ound
f
o
r Gitlab
a
rchi
v
e
s
ize
commit
|
commitdiff
|
tree
2020-01-24
Paul Bauer
Use
u
tf-8
f
o
r p
y
th
o
n file readin
g
commit
|
commitdiff
|
tree
2020-01-21
Paul Bauer
Fix documentatio
n
error
with doxygen >
1
.
8
.
16
commit
|
commitdiff
|
tree
2020-01-17
Paul Bauer
Ac
t
u
a
lly fix Gi
t
la
b
d
oc build
commit
|
commitdiff
|
tree
2020-01-17
Pa
u
l
B
a
uer
Fi
x
ba
d
link
in deve
l
oper docs
commit
|
commitdiff
|
tree
2020-01-16
Paul Bauer
Fix nightly buil
d
f
a
ilu
r
e on
G
i
tla
b
commit
|
commitdiff
|
tree
2020-01-13
Paul Bauer
Reve
r
t "E
x
clude build-system fi
l
es from CPack"
commit
|
commitdiff
|
tree
2020-01-01
P
a
u
l Bau
e
r
Prepare
fo
r
2020
.
1
commit
|
commitdiff
|
tree
2020-01-01
Paul B
a
uer
GROMACS 2020 re
l
ease
commit
|
commitdiff
|
tree
2020-01-01
Paul Bauer
Revert "GROMACS 2020 re
l
eas
e
"
commit
|
commitdiff
|
tree
2020-01-01
Paul Bauer
GROMACS 2020 release
commit
|
commitdiff
|
tree
2019-12-30
Paul Baue
r
F
i
x
build error with wrong
n
ame from ca
c
hed cma
k
e file
commit
|
commitdiff
|
tree
2019-12-28
P
a
ul Ba
u
er
Chang
e
rele
n
g to giv
e
infor
m
ation about
Gitlab
commit
|
commitdiff
|
tree
2019-12-28
Paul Bauer
Extend in
f
o
rmation f
o
r GPU u
p
date
commit
|
commitdiff
|
tree
2019-12-28
Paul
Bauer
Exclud
e
buil
d
-system
f
iles fro
m
CPack
commit
|
commitdiff
|
tree
2019-12-28
Paul Bauer
Remove
m
embed from features
commit
|
commitdiff
|
tree
2019-12-28
Paul Ba
u
er
Depr
e
cate support for Armv7
commit
|
commitdiff
|
tree
2019-12-27
P
aul Bauer
Add cop
y
right
c
heck and impro
v
e
c
a
che
usa
g
e
commit
|
commitdiff
|
tree
2019-12-27
P
au
l
Bauer
M
erge origi
n
/release
-
20
1
9 into re
l
ease-2020
commit
|
commitdiff
|
tree
2019-12-23
Paul Bauer
A
d
d
f
iles for Gitl
a
b CI
commit
|
commitdiff
|
tree
2019-12-23
Paul Bauer
P
repare for GROMACS
2019
.
6
commit
|
commitdiff
|
tree
2019-12-23
Pa
u
l
Bauer
GROMACS versio
n
2019
.
5
commit
|
commitdiff
|
tree
2019-12-23
Paul
B
au
e
r
Rev
e
rt
"
Fix that tests
i
ntended for mul
t
iple ranks
.
.
.
commit
|
commitdiff
|
tree
2019-12-20
Paul
Bauer
Fix wrong header in releas
e
notes
commit
|
commitdiff
|
tree
2019-12-20
Paul Bauer
GROMACS 2020 release candidate
commit
|
commitdiff
|
tree
2019-12-19
P
aul B
a
uer
Fix regress
i
ontes
t
s failing with ctest
commit
|
commitdiff
|
tree
2019-12-18
Paul Ba
u
er
A
dd ability
t
o set OMP and
tMPI thread for ctes
t
commit
|
commitdiff
|
tree
2019-12-18
Paul Bauer
Ignore b
u
ild host for
CI builds
commit
|
commitdiff
|
tree
2019-12-17
Paul Bauer
Test para
l
lel mpi onl
y
wi
t
h openmp
commit
|
commitdiff
|
tree
2019-12-17
Pa
u
l Baue
r
Set cor
r
ect dependency for
d
oc build
o
n g
m
x
a
pi
commit
|
commitdiff
|
tree
2019-12-17
Pa
u
l Bau
e
r
Fix
com
p
iler warn
i
ng abou
t
ex
t
ra ;
commit
|
commitdiff
|
tree
2019-12-17
Paul Bauer
Fix formatting error
commit
|
commitdiff
|
tree
2019-12-16
P
aul
Bauer
Fix tor
s
i
o
n
angle cal
c
ulation
commit
|
commitdiff
|
tree
2019-12-13
Paul
B
aue
r
Ch
e
ck for using correct hwloc headers and
r
unt
i
me
commit
|
commitdiff
|
tree
2019-12-03
Paul Bau
e
r
Third beta release of GROMACS 2020
commit
|
commitdiff
|
tree
2019-12-03
Pa
u
l Bau
e
r
Revert "En
a
ble GPU
upda
t
e with DD whe
n
GPU comm features
.
.
.
commit
|
commitdiff
|
tree
2019-12-03
P
aul Bauer
F
i
x nigh
t
ly build by correctl
y
defini
n
g
s
everal
commit
|
commitdiff
|
tree
2019-12-02
Paul Ba
u
er
S
e
t update t
o
run
o
n GPU by de
f
ault if possible
commit
|
commitdiff
|
tree
2019-12-01
P
a
ul Bauer
Use DOI for citing in reference ma
n
u
a
l section
commit
|
commitdiff
|
tree
2019-11-29
Paul
Bauer
Fix unali
g
ned
a
ccess
wi
t
h AVX
5
12
commit
|
commitdiff
|
tree
2019-11-29
Paul Ba
u
er
Fix build error without thread or regula
r
mpi
commit
|
commitdiff
|
tree
2019-11-28
Paul Bauer
Check
for
using corr
e
c
t
hwloc headers and runtime
commit
|
commitdiff
|
tree
2019-11-28
Paul Bauer
Fix postsub
m
it
commit
|
commitdiff
|
tree
2019-11-26
Pau
l
Bauer
Fix unused vari
a
b
l
e
w
arning
in
ewald code
commit
|
commitdiff
|
tree
2019-11-20
Pa
u
l Bauer
M
e
rge 'origin/release
-
2019'
i
n
to relea
s
e-2020
commit
|
commitdiff
|
tree
2019-11-14
Paul Bauer
Fix formatti
n
g
error
commit
|
commitdiff
|
tree
2019-11-13
Paul Bau
e
r
Add build to run clang-format update on Jen
k
ins
commit
|
commitdiff
|
tree
2019-11-12
Paul Bauer
I
n
dicate
w
hich
v
ersions are no longer supporte
d
commit
|
commitdiff
|
tree
2019-11-07
Paul Bauer
Apply
c
l
ang-format to source tree
commit
|
commitdiff
|
tree
2019-11-04
Paul Bauer
Add build for cl
a
ng-
f
o
r
mat
commit
|
commitdiff
|
tree
2019-11-04
Paul B
a
uer
Split up source
c
ode for
m
atting scripts
commit
|
commitdiff
|
tree
2019-11-01
Paul Bauer
Se
c
ond beta relea
s
e of GROMACS 2020
commit
|
commitdiff
|
tree
2019-11-01
P
a
ul Bau
e
r
Prepa
r
e for 2020 beta
2
commit
|
commitdiff
|
tree
2019-11-01
Paul Bauer
A
dd vali
d
atio
n
of tarba
l
l builds
commit
|
commitdiff
|
tree
2019-10-31
Paul Bauer
Use
t
ype
of explicit size in inmemoryserializer
commit
|
commitdiff
|
tree
2019-10-29
P
aul Bauer
Merge "Merge branch 'release-2019'
i
nto
m
aster
"
commit
|
commitdiff
|
tree
2019-10-29
Pa
u
l Ba
u
e
r
M
e
rge branch 'release-201
9
'
i
nto mast
e
r
commit
|
commitdiff
|
tree
2019-10-18
Paul Bauer
Use c
l
a
n
g-tidy-
8
commit
|
commitdiff
|
tree
2019-10-15
Pa
u
l Ba
u
e
r
Fix bug in pr
e
proc
e
ssing
commit
|
commitdiff
|
tree
2019-10-11
P
a
ul Bauer
Add
helper t
o
re
u
s
e
ge
n
erate
d
TPR fi
l
es in testi
n
g
commit
|
commitdiff
|
tree
2019-10-10
Paul Bauer
Basic population of
s
imulation w
o
rkl
o
ad
commit
|
commitdiff
|
tree
2019-10-02
P
a
ul Bau
e
r
Fix failu
r
e
s in
clang-8 nightly
build
commit
|
commitdiff
|
tree
2019-10-02
Paul
Bauer
Prepare fo
r
20
1
9
.
5
commit
|
commitdiff
|
tree
2019-10-02
Paul
Ba
u
er
GROMACS v
e
rsion 2019
.
4
commit
|
commitdiff
|
tree
2019-10-01
Paul
B
aue
r
Fix
cha
i
n
ID handl
i
ng in mak
e
_nd
x
commit
|
commitdiff
|
tree
2019-09-26
Paul Ba
u
er
R
evert "
R
emove updat
e
flag again"
commit
|
commitdiff
|
tree
2019-09-25
Pa
u
l Bauer
G
R
OMACS 2020 first
b
e
ta
release
commit
|
commitdiff
|
tree
2019-09-24
Pau
l
B
a
uer
Ad
d
test for noappe
n
d
commit
|
commitdiff
|
tree
2019-09-24
Paul
Bau
e
r
Merg
e
branch relea
s
e-2019 i
n
to
m
aster
commit
|
commitdiff
|
tree
2019-09-24
P
a
u
l Bauer
Read in TPR char buffer a
s
vector
commit
|
commitdiff
|
tree
2019-09-24
Paul Bauer
A
d
d release
note
s
f
o
r
m
odular simulator
commit
|
commitdiff
|
tree
2019-09-23
P
aul Baue
r
Fix issues w
h
en PME rank request becomes n
e
g
a
tiv
e
commit
|
commitdiff
|
tree
2019-09-23
Paul Bauer
Change MPI setup to communicate TPR a
s
buffer
commit
|
commitdiff
|
tree
2019-09-22
Paul Bauer
Remove upda
t
e
flag
a
g
a
in
commit
|
commitdiff
|
tree
2019-09-19
Paul Bauer
Add basic interface to
run up
d
ate on G
P
U
commit
|
commitdiff
|
tree
2019-09-19
P
a
u
l Bau
e
r
Spl
i
t up do_tpx_
b
ody f
u
nct
i
ons
commit
|
commitdiff
|
tree
2019-09-18
P
aul Bauer
R
ead TPR
f
ile body in bu
f
fer
commit
|
commitdiff
|
tree
2019-09-18
Paul Baue
r
Fi
x
M
SVC
w
arning
commit
|
commitdiff
|
tree
2019-09-17
Paul
B
a
u
e
r
Add dep
r
ecatio
n
note for 32 b
i
t
commit
|
commitdiff
|
tree
2019-09-16
Pa
u
l
B
auer
F
o
rmattin
g
fixes for reference manua
l
commit
|
commitdiff
|
tree
2019-09-13
Paul Bauer
Fix nightl
y
failures
commit
|
commitdiff
|
tree
2019-09-13
Pa
u
l
Bauer
Add list
of
u
n
supported functio
n
s in 2020
commit
|
commitdiff
|
tree
2019-09-11
Paul
B
a
u
er
Remove -sub option from trj
c
o
n
v
commit
|
commitdiff
|
tree
2019-09-11
Pa
u
l Bauer
A
dd mi
s
sin
g
gmxa
p
i requirements
commit
|
commitdiff
|
tree
2019-09-11
Pau
l
Bauer
Basi
c
t
o
o
l
cha
i
n
t
o facilitate GMX
A
PI bui
l
d
commit
|
commitdiff
|
tree
2019-09-11
Paul Bauer
D
isable
false positi
v
e
warning
in ICC and MSVC
commit
|
commitdiff
|
tree
2019-09-10
Paul Bau
e
r
Add indication on how to e
n
a
ble I
m
ag
e
M
a
gick convert
commit
|
commitdiff
|
tree
2019-09-10
Paul Bau
e
r
Fix night
l
y build
commit
|
commitdiff
|
tree
2019-09-10
Pa
u
l
B
auer
Add
method to extract
c
lusters f
r
om trajectory
commit
|
commitdiff
|
tree
next