.travis.yml

   1 language: perl
   2 perl:
   3   - "5.24"
   4   #- "5.20"
   5   - "5.18"
   6   #- "5.16"
   7   #- "5.14"
   8
   9 sudo: false
  10 env: PERL_CPANM_OPT="--notest --force --skip-satisfied"
  11
  12 addons:
  13   apt:
  14     packages:
  15       - samtools
  16       - ncbi-blast+
  17       - ncbi-blast+-legacy
  18       - clustalw
  19       - bwa
  20       - hmmer
  21       - emboss
  22       - probcons
  23       - wise
  24       #- muscle
  25       #- bedtools
  26       #- mafft
  27
  28 install:
  29     #These are recommended or required Perl libraries
  30     - "cpanm CJFIELDS/BioPerl-1.007000_005.tar.gz 2>&1 | tail -n 1"
  31     - "cpanm Bio::FeatureIO 2>&1 | tail -n 1"
  32     - "cpanm IPC::Run XML::Twig 2>&1 | tail -n 1"
  33     - "cpanm Config::Any 2>&1 | tail -n 1"
  34     #- "SAMTOOLS=( dirname `which samtools` ) cpanm Bio::DB::Sam 2>&1 | tail -n 1"
  35
  36 script:
  37     - "perl ./Build.PL --accept"
  38     - "./Build test"
  39
  40 #after_success:
  41 #    - ./travis_scripts/trigger-dockerhub.sh
  42
  43 #TODO - send emails to bioperl-guts-l
  44 notifications:
  45   email:
  46     recipients:
  47       #- bioperl-guts-l@lists.open-bio.org
  48       - cjfields1@gmail.com
  49     on_success: change
  50     on_failure: change
  51
  52 # whitelist branches
  53 branches:
  54   only:
  55     - master