t/data/contigspectrumtest.tigr

   1 sequence        TTCCTTGGCCGCTCTGGTCAGCCCTCGCGATATCCGTATCTCTCCCCGCAGCCAGTCTACATCCCmCCATTCTACCGCGATGAGTTCGCTGGTCCGCAGCCCGGTCCACATGGCGAACTGCAACAGGTTCCGGTACTGGCCATCGGTGCCGGCCAGArTCAGTCGCTGCTCTTCCGGCGAGAACGGATCArTCTCGTCCTCGGTCyTCGGCTTCTCCCTGACCGAGTACGTCCAGCCCGCCAGCGGGTTGATCTCGAyCAGTTCGTCATGCACGGCATCATCTAGCGCCGACCGTAGGCAGCTCTGTACGTTCGACAGGCGCTTGTTCGAGGCGTCCATGCTCGCCATAGCCTCCTTGATCATCTTGCGACTGAGCAGCACCAGGGGATGATCGCCCAGCyTCGGCACCAGTACCCCGTCGATGATCTTCCGATAGCCATCGATGGTGCTTGCCTTCAGGACCTTCTCTTTCTTCTCCCGCCAGCTTGCGAGGTATTTCGACAACGGTACTTGCCCGGTCTGGTATCCAAGCCGATTGGCTCGCTTGGACTTGGGGAAGGTGGCCAGATAGTCGAACGTGCCGTTGTAGATCGTCAGTTCGATAGCGGCCTTGTGCTGCTCGACGCGTTTCAGGTTAGCGGGGCTGGGCTCAAGTGGGATGCGTTCGCGGCACTGCTCACCATCGAACATGAAGCTGATTTCAATACTACTTTTCGACGCCGCTCTGAcGCCGCTGCGCTTTCCACCCATTCCGCATACCCATCCACACTTATTAGAGGTTTGTTGTCCGGCGCATGCCTCCATACGAGCCCCTTGGGCCATGTGCCGTCAGCGATCTTGGCTCTGATCGCGGCCTCAGTGTAGCCACTTTCGATGGCGAACTGGCTGATCGTCTTGTATTTGACCATCTCAACCCTCCTTGCTCATGGCTTCACGGAATGCAGCGGTGTATTCCTCGACGATCTTTTCAAGTGGgTCGCTGCCGGCCGGATCGCAAAGCCGGTCGATATATTTGATTGCCATTCGGCCAAGAGCTGCATCCTTGCGCAGAGCCTCGGCTTCAGCCATGArGCAGGCGTCGCACGGcTCAGACTTGCTCGCCGCCCCATCCCTGAACCCGTCCCGCGAAGCATTGGCCATGTCTACGGCGGTGTAGAGCGGAGTAGGGCCGCCGCGCAGGTGTTCGATCATCTTGGCCTGCTGAGCGACTGTGGCTTCCAGGGCGATAATTTTGTAGTCCTGCTCG
   2 lsequence       TTCCTTGGCCGCTCTGGTCAGCCCTCGCGATATCCGTATCTCTCCCCGCAGCCAGTCTACATCCCmCCATTCTACCGCGATGAGTTCGCTGGTCCGCAGCCCGGTCCACATGGCGAACTGCAACAGGTTCCGGTACTGGCCATCGGTGCCGGCCAGArTCAGTCGCTGCTCTTCCGGCGAGAACGGATCArTCTCGTCCTCGGTCyTCGGCTTCTCCCTGACCGAGTACGTCCAGCCCGCCAGCGGGTTGATCTCGAyCAGTTCGTCATGCACGGCATCATCTAGCGCCGACCGTAGGCAGCTCTGTACGTTCGACAGGCGCTTGTTCGAGGCGTCCATGCTCGCCATAGCCTCCTTGATCATCTTGCGACTGAGCAGCACCAGGGGATGATCGCCCAGCyTCGGCACCAGTACCCCGTCGATGATCTTCCGATAGCCATCGATGGTGCTTGCCTTCAGGACCTTCTCTTTCTTCTCCCGCCAGCTTGCGAGGTATTTCGACAACGGTACTTGCCCGGTCTGGTATCCAAGCCGATTGGCTCGCTTGGACTTGGGGAAGGTGGCCAGATAGTCGAACGTGCCGTTGTAGATCGTCAGTTCGATAGCGGCCTTGTGCTGCTCGACGCGTTTCAGGTTAGCGGGGCTGGGCTCAAGTGGGATGCGTTCGCGGCACTGCTCACCATCGAACATGAAGCTGATTTCAATACTACTTTTCGACGCCGCTCTGA-cGCCGCTGCGCTTTCCACCCATTCCGCATACCCATCCACACTTATTAGAGGTTTGTTGTCCGGCGCATGCCTCCATACGAGCCCCTTGGGCCATGTGCCGTCAGCGATCTTGGCTCTGATCGCGGCCTCAGTGTAGCCACTTTCGATGGCGAACTGGCTGATCGTCTTGTATTTGACCATCTCAACCCTCCTTGCTCATGGCTTCACGGAATGCAGCGGTGTATTCCTCGACGATCTTTTCAAGTGGgTCGCTGCCGGCCGGATCGCAAAGCCGGTCGATATATTTGATTGCCATTCGGCCAAGAGCTGCATCCTTGCGCAGAGCCTCGGCTTCAGCCATGArGCAGGCGTCGCACGGcTCAGACTTGCTCGCCGCCCCATCCCTGAACCCGTCCCGCGAAGCATTGGCCATGTCTACGGCGGTGTAGAGCGGAGTAGGGCCGCCGCGCAGGTGTTCGATCATCTTGGCCTGCTGAGCGACTGTGGCTTCCAGGGCGATAATTTTGTAGTCCTGCTCG
   3 quality 0x0B0B0B0B0B0B0B0B0B0404040404040404040404040404040E04040404040404040404040404040402020202020202020202020202020202020202020202020202160202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020202020404040404040404040404040404040404040416040404040404040404040404040404040404040404040404040404040404040416040404040404040404040404040416040404040404040404040404040404040402020202020202020202020202020202020202020202020202020202020202020202160202020202020202020202020202020202020909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090202020D02020D02020202020202020202020202020202020202020202020202020202020202020201010101010101010101010101010102020216020202020202020202020202020202020202020202020202020202020202020202020202090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303080303030303110303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303080303030303030303030303030303030303030303030303030303030303030303030303030803030303030303030303030303030303030303030303030303030303030303030303030303030303030313030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303050505050505050505050505050505050505050C0505050505050505050505160505050505050505050505050505050E050505050505050505050505050505050505050E050505050505050505050505050505050B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B
   4 asmbl_id        2
   5 seq_id
   6 com_name
   7 type
   8 method  asmg
   9 ed_status
  10 redundancy      2.13
  11 perc_N  0.80
  12 seq#    6
  13 full_cds
  14 cds_start
  15 cds_end
  16 ed_pn   GRA
  17 ed_date 08/25/07 22:59:00
  18 comment
  19 frameshift
  20
  21 seq_name        SDSU_RFPERU_013_C07.x01.phd.1
  22 asm_lend        1
  23 asm_rend        276
  24 seq_lend        1
  25 seq_rend        276
  26 best    0
  27 comment
  28 db      sdsu
  29 offset  0
  30 lsequence       TTCCTTGGCCGCTCTGGTCAGCCCTCGCGATATCCGTATCTCTCCCCGCAGCCAGTCTACATCCCCCCATTCTACCGCGATGAGTTCGCTGGTCCGCAGCCCGGTCCACATGGCGAACTGCAACAGGTTCCGGTACTGGCCATCGGTGCCGGCCAGAATCAGTCGCTGCTCTTCCGGCGAGAACGGATCAATCTCGTCCTCGGTCTTCGGCTTCTCCCTGACCGAGTACGTCCAGCCCGCCAGCGGGTTGATCTCGACCAGTTCGTCATGCACGGC
  31
  32 seq_name        SDSU_RFPERU_013_G10.x01.phd.1
  33 asm_lend        10
  34 asm_rend        437
  35 seq_lend        428
  36 seq_rend        1
  37 best    0
  38 comment
  39 db      sdsu
  40 offset  9
  41 lsequence       CGCTCTGGTCAGCCCCCGCGATATCCGTATCTCTCCCCGCAGCCAGTCTACATCCCACCATTCTACCGCGATGAGTTCGCTGGTCCGCAGCCCGGTCCACATGGCGAACTGCAACAGGTTCCGGTACTGGCCATCGGTGCCGGCCAGAGTCAGTCGCTGCTCTTCCGGCGAGAACGGATCAGTCTCGTCCTCGGTCCTCGGCTTCTCCCTGACCGAGTACGTCCAGCCCGCCAGCGGGTTGATCTCGATCAGTTCGTCATGCACGGCATCATCTAGCGCCGACCGTAGGCAGCTCTGTACGTTCGACAGGCGCTTGTTCGAGGCGTCCATGCTCGCCATAGCCTCCTTGATCATCTTGCGACTGAGCAGCACCAGGGGATGATCGCCCAGCTTCGGCACCAGTACCCCGTCGATGATCTTCCGATAGC
  42
  43 seq_name        SDSU1_RFPERU_001_A09.x01.phd.1
  44 asm_lend        343
  45 asm_rend        839
  46 seq_lend        2
  47 seq_rend        496
  48 best    0
  49 comment
  50 db      sdsu
  51 offset  342
  52 lsequence       CGC-ATCGCCTCCTTGATCATCTTGCGACTGAGCAGCACCAGGGGATGATCGCCCAGCCTCGGCACCAGTACCCCGTCGATGATCTTCCGATAGCCATCGATGGTGCTTGCCTTCAGGACCTTCTCTTTCTTCTCCCGCCAGCTTGCGAGGTATTTCGACAACGGTACTTGCCCGGTCTGGTATCCAAGCCGATTGGCTCGCTTGGACTTGGGGAAGGTGGCCAGATAGTCGAACGTGCCGTTGTAGATCGTCAGTTCGATAGCGGCCTTGTGCTGCTCGACGCGTTTCAGGTTAGCGGGGCTGGGCTCAAGTGGGATGCGTTCGCGGCACTGCTCACCATCGAACATGAAGCTGATTTCAATACTACTTTTCGACGCCG-TCTGA-CGCCGCTGCGCTTTCCACCCATTCCGCATACCCATCCACACTTATTAGAGGTTTGTTGTCCGGCGCATGCCTCCATACGAGCCCCTTGGGCCATGTGCCGTCAGCGATCTT
  53
  54 seq_name        SDSU1_RFPERU_001_B04.x01.phd.1
  55 asm_lend        498
  56 asm_rend        1123
  57 seq_lend        1
  58 seq_rend        623
  59 best    0
  60 comment
  61 db      sdsu
  62 offset  497
  63 lsequence       TCGACAACGGTACTTGCCCGGTCTGGTATCCAAGCCGATTGGCTCGCTTGGACTTGGGGAAGGTGGCCAGATAGTCGAACGTGCCGTTGTAGATCGTCAGTTCGATAGCGGCCTTGTGCTGCTCGACGCGTTTCAGGTTAGCGGGGCTGGGCTCAAGTGGGATGCGTTCGCGGCACTGCTCACCATCGAACATGAAGCTGATTTCAATACTACTTTTCGACGCCGCTCTGA-CGCCGCTGCGCTTTCCACCCATTCCGCATACCCATCCACACTTATTAGAGGTTTGTTGTCCGGCGCATGCCTCCATACGAGCCCCTTGGGCCATGTGCCGTCAGCGATCTTGGCTCTGATCGCGGCCTCAGTGTAGCCACTTTCGATGGCGAACTGGCTGATCGTCTCGTATTTGACCATCTCAACCCTCCTTGCTCATGGCTTCACGGAATGCAGCGGTGTATTCCTCGACGATCTTTTCAAGTGGGTCGCTGCCGGCCGGATCGCAAAGCCGGTCGATATATTTGATTGCCATTCGGCCAAGAGCTGCATCCTTGCGCAGAGCCTCGG-TTCAGCCATGAGGCAGGCGTCGCACGG-TCAGACTTGCTCGCCGCCC-ATCCCTGAACCCGTCC
  64
  65 seq_name        SDSU_RFPERU_015_G04.x01.phd.1
  66 asm_lend        668
  67 asm_rend        1082
  68 seq_lend        1
  69 seq_rend        416
  70 best    0
  71 comment
  72 db      sdsu
  73 offset  667
  74 lsequence       CGGCACTGCTCACCATCGAACATGAAGCTGATTTCAATACTACTTTTCGACGCCGCTCTGAACGCCGCTGCGCTTTCCACCCATTCCGCATACCCATCCACACTTATTAGAGGTTTGTTGTCCGGCGCATGCCTCCATACGAGCCCCTTGGGCCATGTGCCGTCAGCGATCTTGGCTCTGATCGCGGCCTCAGTGTAGCCACTTTCGATGGCGAACTGGCTGATCGTCTTGTATTTGACCATCTCAACCCTCCTTGCTCATGGCTTAACGGAATGCAGCGGTGTATTCCTCGACGATCTTTTCAAGTGGGTCGCTGCCGGCCGGATCGCAAAGCCGGTCGATATATTTGATTGCCATTCGGCCAAGAGCTGCATCCTTGCGCAGAGCCTCGGCTTCAGCCATGAAGCAGGCGTCGC
  75
  76 seq_name        SDSU_RFPERU_014_H06.x01.phd.1
  77 asm_lend        833
  78 asm_rend        1246
  79 seq_lend        1
  80 seq_rend        413
  81 best    0
  82 comment
  83 db      sdsu
  84 offset  833
  85 lsequence       CGATCTTGGCTCTGATCGCGGCCTCAGTGTAGCCACTTTCGATGGCGAACTGGCTGATCGTCTTGTATTTGACCATCTCAACCCTCCTTGCTCATGGCTTCACGGAATGCAGCGGTGTATTCCTCGACGATCTTTTCAAGTGG-TCGCTGCCGGCCGGATCGCAAAGCCGGTCGATATATTTGATTGCCATTCGGCCAAGAGCTGCATCCTTGCGCAGAGCCTCGGCTTCAGCCATGAAGCAGGCGTCGCACGGCTCAGACTTGCTCGCCGCCCCATCCCTGAACCCGTCCCGCGAAGCATTGGCCATGTCTACGGCGGTGTAGAGCGGAGTAGGGCCGCCGCGCAGGTGTTCGATCATCTTGGCCTGCTGAGCGACTGTGGCTTCCAGGGCGATAATTTTGTAGTCCTGCTCG
  86 |
  87 sequence        TAGGATTGGATTATTTGGAAAGGGTTTTTGCGCGCTTCTTCGACCACGCAATCACGTCAAGCACCGCGCTTTTGCTGAACACGCTGCGCTGCTTGTAGTAGTCGATCGAGTCCCGGGCTACGCTGAAGCAAATGCCCTCTGGATACTTCAGCTTGCGCAGTTCGTCGTGAACGTTTTTTCGATGAACTCAAACGGAGTCATATCGCCACCCATTCGTTTTTGCCGTTGTAGAAGCCTCGCCAyTCCCCGAGCCTGAACACCAAGGTCCCAGGGtGCAGAGCCATGCGCGAGAGATTGGCCAGCCATCGAGCCGGAAGCTTTTCTTGATCGCGCTCAGACGGCGCTTGCGGATTCGCGTTCGTGACAGATCGATCCGCCGGATTCGGATTAGAGCCATGTTGAATTCCAGyCAGGCGCCGCCCTCCGGGTTCCGGATGCAGCAGGTTGGATGGGGTTACTGCTTCGGCGCTTTCGGGAAGAACGCAGGGCGTGGGCCGCCGCGCTTCGATTTTGGATAGTCGATTTCGAACTTGGTGAGGATGCGAGTGAAGGCTGTAAAAGAGATTCCGGCCTTTTCCATAGCCTGGTTTCGCGTCAAGCCAAGCTCCTTGAACGCCTTGATGCGTGCTGCGTCTTGCGCATCTTTTGCTTCATCGACAGTGGCCGGTTTCAGATTCTTGCGCGCATAATAGGATGCTGACTGAAAACTGAATCCTCCTTCTTTGGCCAGAGAA
  88 lsequence       TAGGATTGGATTATTTGGAAAGGGTTTTTGCGCGCTTCTTCGACCACGCAATCACGTCAAGCACCGCGCTTTTGCTGAACACGCTGCGCTGCTTGTAGTAGTCGATCGAGTCCCGGGCTACGCTGAAGCAAATGCCCTCTGGATACTTCAGCTTGCGCAGTTCGTCGTGAACGTTTTTTCGATGAACTCAAACGGAGTCATATCGCCACCCATTCGTTTTTGCCGTTGTAGAAGCCTCGCCAyTCCCCGAGCCTGAACACCAAGGTCCCAGGG-tGCAGAGCCATGCGCGAGAGATTGGCCAGCCATCGAGCCGGAAGCTTTTCTTGATCGCGCTCAGACGGCGCTTGCGGATTCGCGTTCGTGACAGATCGATCCGCCGGATTCGGATTAGAGCCATGTTGAATTCCAGyCAGGCGCCGCCCTCCGGGTTCCGGATGCAGCAGGTTGGATGGGGTTACTGCTTCGGCGCTTTCGGGAAGAACGCAGGGCGTGGGCCGCCGCGCTTCGATTTTGGATAGTCGATTTCGAACTTGGTGAGGATGCGAGTGAAGGCTGTAAAAGAGATTCCGGCCTTTTCCATAGCCTGGTTTCGCGTCAAGCCAAGCTCCTTGAACGCCTTGATGCGTGCTGCGTCTTGCGCATCTTTTGCTTCATCGACAGTGGCCGGTTTCAGATTCTTGCGCGCATAATAGGATGCTGACTGAAAACTGAATCCTCCTTCTTTGGCCAGAGAA
  89 quality 0x0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090903030D030303030303030303030303030303030303030303030303030303030303030303030303030303030303160303030303030303030303030303030303030303030303030303030303030D0303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030316030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030303030305050505050505050505050505050505050505050505050505050B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B
  90 asmbl_id        17
  91 seq_id
  92 com_name
  93 type
  94 method  asmg
  95 ed_status
  96 redundancy      1.43
  97 perc_N  0.41
  98 seq#    2
  99 full_cds
 100 cds_start
 101 cds_end
 102 ed_pn   GRA
 103 ed_date 08/25/07 22:59:00
 104 comment
 105 frameshift
 106
 107 seq_name        SDSU1_RFPERU_001_E04.x01.phd.1
 108 asm_lend        1
 109 asm_rend        510
 110 seq_lend        1
 111 seq_rend        511
 112 best    0
 113 comment
 114 db      ZZZ
 115 offset  0
 116 lsequence       TAGGATTGGATTATTTGGAAAGGGTTTTTGCGCGCTTCTTCGACCACGCAATCACGTCAAGCACCGCGCTTTTGCTGAACACGCTGCGCTGCTTGTAGTAGTCGATCGAGTCCCGGGCTACGCTGAAGCAAATGCCCTCTGGATACTTCAGCTTGCGCAGTTCGTCGTGAACGTTTTTTCGATGAACTCAAACGGAGTCATATCGCCACCCATTCGTTTTTGCCGTTGTAGAAGCCTCGCCATTCCCCGAGCCTGAACACCAAGGTCCCAGGGGTGCAGAGCCATGCGCGAGAGATTGGCCAGCCATCGAGCCGGAAGCTTTTCTTGATCGCGCTCAGACGGCGCTTGCGGATTCGCGTTCGTGACAGATCGATCCGCCGGATTCGGATTAGAGCCATGTTGAATTCCAGTCAGGCGCCGCCCTCCGGGTTCCGGATGCAGCAGGTTGGATGGGGTTACTGCTTCGGCGCTTTCGGGAAGAACGCAGGGCGTGGGCCGCCGCGCTTCGATT
 117
 118 seq_name        SDSU_RFPERU_006_E05.x01.phd.1
 119 asm_lend        198
 120 asm_rend        734
 121 seq_lend        3
 122 seq_rend        538
 123 best    0
 124 comment
 125 db      ZZZ
 126 offset  197
 127 lsequence       TC-TATCGCCACCCATTCGTTTTTGCCGTTGTAGAAGCCTCGCCACTCCCCGAGCCTGAACACCAAGGTCCCAGGG-TGCAGAGCCATGCGCGAGAGATTGGCCAGCCATCGAGCCGGAAGCTTTTCTTGATCGCGCTCAGACGGCGCTTGCGGATTCGCGTTCGTGACAGATCGATCCGCCGGATTCGGATTAGAGCCATGTTGAATTCCAGCCAGGCGCCGCCCTCCGGGTTCCGGATGCAGCAGGTTGGATGGGGTTACTGCTTCGGCGCTTTCGGGAAGAACGCAGGGCGTGGGCCGCCGCGCTTCGATTTTGGATAGTCGATTTCGAACTTGGTGAGGATGCGAGTGAAGGCTGTAAAAGAGATTCCGGCCTTTTCCATAGCCTGGTTTCGCGTCAAGCCAAGCTCCTTGAACGCCTTGATGCGTGCTGCGTCTTGCGCATCTTTTGCTTCATCGACAGTGGCCGGTTTCAGATTCTTGCGCGCATAATAGGATGCTGACTGAAAACTGAATCCTCCTTCTTTGGCCAGAGAA
 128 |
 129 sequence        CCGTTCAAGCAGGAGATCAGCGCCTGCCATCTGCAACAGAGCATGGGGCGTCAAACCTCTGCGGCGTAGATCCTATATTCACAGGGGAGCCAAAAGCATTTGACCAACTGAGGGGAAGTGCCTCGGTGCCAAATTCAGAGCCTCGCCATCGTGCGGGGCTTTTTTGTTTCCTTCTTCCACTGCTCCCCAGCAGTTTGGCCGCCAACTGACGGCCTTTTTTATTCCTGGAGTCACGCCATGGCCGAACCCGCGAGCACCACTGCCGCCGGTGTCCTGCTCGCGAAGTACGGCATCATCATCGCTGGCTTCGCTGGAGCAATCCTTTCGCTGACCTTCCTTCAnGGGCCTGACCCGCAAGCAGGCCATTTGGGCATTCTTCACCGGGTTCGGCTCTGCGATCTTCTGCACGCCGCTGGCGATCAGCTTCTTCAAGCTGGAGCCTGGTGGCGAAACTCAATACGGCGTCGCATTCCTGATCGGCCTGCTGGCCATGAACATCATTCCCCTGTTGAAGAaAGCAATGCCGGGAGTGTTTGGCGTCTCGGGAGGTGCaGTAATGCAAACCATCCTGCAAGTCCTTGACGCTTTCCTGTGTGtgCTGGTGGTGCTAGCCGCTGCTGAGTACCT
 130 lsequence       CCGTTCAAGCAGGAGATCAGCGCCTGCCATCTGCAACAGAGCATGGGGCGTCAAACCTCTGCGGCGTAGATCCTATATTCACAGGGGAGCCAAAAGCATTTGACCAACTGAGGGGAAGTGCCTCGGTGCCAAATTCAGAGCCTCGCCATCGTGCGGGGCTTTTTTGTTTCCTTCTTCCACTGCTCCCCAGCAGTTTGGCCGCCAACTGACGGCCTTTTTTATTCCTGGAGTCACGCCATGGCCGAACCCGCGAGCACCACTGCCGCCGGTGTCCTGCTCGCGAAGTACGGCATCATCATCGCTGGCTTCGCTGGAGCAATCCTTTCGCTGACCTTCCTTCAnGGGCCTGACCCGCAAGCAGGCCATTTGGGCATTCTTCACCGGGTTCGGCTCTGCGATCTTCTGCACGCCGCTGGCGATCAGCTTCTTCAAGCTGGAGCCTGGTGGCGAAACTCAATACGGCGTCGCATTCCTGATCGGCCTGCTGGCCATGAACATCATTCCCCTGTTGAAGA-aAGCAATGCCGGGAGTGTTTGGCGTCTCGGGAGGTGCaGTAATGCAAACCATCCTGCAAGTCCTTGACGCTTTCCTGTGTGtgCTGGTGGTGCTAGCCGCTGCTGAGTACCT
 131 quality 0x0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090B0B0B0B0B0B0B0B0B0B0B0B0B0B0B150B0B0B0B0B0B0B0B0B0B0B0B0B0B0B090909090909090909090909090909090909090B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B04040404040404040404040404040404040404040404040404040404040404040404040404040404040404040404040404040404040404040E040404040404040404040404040402020202020202020202020202020202020202020202020D020202020202040404040404040404040404040404040404040404040404040404040404040404040404040E0E0404040B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B
 132 asmbl_id        106
 133 seq_id
 134 com_name
 135 type
 136 method  asmg
 137 ed_status
 138 redundancy      1.23
 139 perc_N  0.80
 140 seq#    2
 141 full_cds
 142 cds_start
 143 cds_end
 144 ed_pn   GRA
 145 ed_date 08/25/07 22:59:00
 146 comment
 147 frameshift
 148
 149 seq_name        SDSU_RFPERU_006_E04.x01.phd.1
 150 asm_lend        1
 151 asm_rend        627
 152 seq_lend        1
 153 seq_rend        626
 154 best    0
 155 comment
 156 db      sdsu
 157 offset  0
 158 lsequence       CCGTTCAAGCAGGAGATCAGCGCCTGCCATCTGCAACAGAGCATGGGGCGTCAAACCTCTGCGGCGTAGATCCTATATTCACAGGGGAGCCAAAAGCATTTGACCAACTGAGGGGAAGTGCCTCGGTGCCAAATTCAGAGCCTCGCCATCGTGCGGGGCTTTTTTGTTTCCTTCTTCCACTGCTCCCCAGCAGTTTGGCCGCCAACTGACGGCCTTTTTTATTCCTGGAGTCACGCCATGGCCGAACCCGCGAGCACCACTGCCGCCGGTGTCCTGCTCGCGAAGTACGGCATCATCATCGCTGGCTTCGCTGGAGCAATCCTTTCGCTGACCTTCCTTCANGGGCCTGACCCGCAAGCAGGCCATTTGGGCATTCTTCACCGGGTTCGGCTCTGCGATCTTCTGCACGCCGCTGGCGATCAGCTTCTTCAAGCTGGAGCCTGGTGGCGAAACTCAATACGGCGTCGCATTCCTGATCGGCCTGCTGGCCATGAACATCATTCCCCTGTTGAAGA-AAGCAATGCCGGGAGTGTTTGGCGTCTCGGGAGGTGC-GTAATGCAAACCATCCTGCAAGTCCTTGACGCTTTCCTGTGTGTGCTGGTGGTGCTAGCCGCTGCTGAGTACCT
 159
 160 seq_name        SDSU_RFPERU_010_B05.x01.phd.1
 161 asm_lend        460
 162 asm_rend        601
 163 seq_lend        141
 164 seq_rend        1
 165 best    0
 166 comment
 167 db      ZZZ
 168 offset  459
 169 lsequence       CGGCGTCGCATTCCTGATCGGCCTGCTGGCCATGAACATCATTCCCCTGTTGAAGAGAAGCAATGCCGGGAGTGTTTGGCGTCTCGGGAGGTGCAGTAATGCAAACCATCCTGCAAGTCCTTGACGCTTTCCTGTGTG--CTG
 170 |
 171 sequence        AGCGCCGATACACATGCTCAAACCGCGCATCGAAGTCTTCGATCAAGACGCTGAAGTAGTAGCCGTCCATGTTGAAGTTGAGCGGCTGACCGGCGTCACGCAGCGTCTCCAGCTCCGTGACGCGGTCACCAGCTGTCGCGCCAGTGATCCAGCCAGACCACTGGATGTTCTTGTAATCCAGACCGAGAACATCGACAACACGCTTGCCGCCTACCAGTTTGTGCACCACGAGCTTCTGTTTGGCGCCGATCGATACTGACTCTGGGACTTCCAGGCCGGTGAACTCGACATCTCCAACGATCAACCGCGTGGCAAACGGATCCCCGCCCGGAGCGAAGTTGTCCAGGAAGCTCGTAAAGCTCATCGTTTATCCCCTTGGATAGGCTGCGCTCGGGGTTCCTGGCATCAGCATGCTGCGGTTCGGATCGAAGCCCTGCGTCCCTGTCCGTGGCTTCGCGGCTTCCTTCGCCATCCGCTGGATTACCACGTCGCTGACTTGTTTGCCGTCGATGTACAGGTTGATGTTCTGTTGGCCATCGGCGCcAGACTTGCCCGGGACCGGAGCCACCAGCGGAGACCATGCTGGCTTTTTCTCCCCGCTTCCACGGAAATCATCGGCGAATGTAGGTTTTTGAGATCTGCATCGATGCTGGAAGAATCAGGTTTGCGCCAGCGATCAGCGTGTTGAAGATCGTCTGCCAGCCGGTCAAGAAGACCAGAGCAAATGACTTGAATGCGCCGCCGATATCGCCCTGAAAGAGTTTTACAAACCCGGTCTTCATGTCGTTCCACATGAGCTTCAATGCTCCGCTGATCTCCTTCCAGTTGTTCCATAGTAGGAAGGCCGCCGCCGCGATCGCCAGATCACTAGGCCAATTGGATTCATGAGGAGTGCACGGCCAAGATTGACCACAGTCATCACAAGATAAGTTCCCATACGCGCTATCCATGGGATCAGCGGTG
 172 lsequence       AGCGCCGATACACATGCTCAAACCGCGCATCGAAGTCTTCGATCAAGACGCTGAAGTAGTAGCCGTCCATGTTGAAGTTGAGCGGCTGACCGGCGTCACGCAGCGTCTCCAGCTCCGTGACGCGGTCACCAGCTGTCGCGCCAGTGATCCAGCCAGACCACTGGATGTTCTTGTAATCCAGACCGAGAACATCGACAACACGCTTGCCGCCTACCAGTTTGTGCACCACGAGCTTCTGTTTGGCGCCGATCGATACTGACTCTGGGACTTCCAGGCCGGTGAACTCGACATCTCCAACGATCAACCGCGTGGCAAACGGATCCCCGCCCGGAGCGAAGTTGTCCAGGAAGCTCGTAAAGCTCATCGTTTATCCCCTTGGATAGGCTGCGCTCGGGGTTCCTGGCATCAGCATGCTGCGGTTCGGATCGAAGCCCTGCGTCCCTGTCCGTGGCTTCGCGGCTTCCTTCGCCATCCGCTGGATTACCACGTCGCTGACTTGTTTGCCGTCGATGTACAGGTTGATGTTCTGTTGGCCATCGGCGCcAGACTTGCCCGGGACCGGAGCCACCAGCGGAGACCATGCTGGCTTTTTCTCCCCGCTTCCACGGAAATCATCGGCGAATGTAGGTTTTTGAGATCTGCATCGATGCTGGAAGAATCAGGTTTGCGCCAGCGATCAGCGTGTTGAAGATCGTCTGCCAGCCGGTCAAGAAGACCAGAGCAAATGACTTGAATGCGCCGCCGATATCGCCCTGAAAGAGTTTTACAAACCCGGTCTTCATGTCGTTCCACATGAGCTTCAATGCTCCGCTGATCTCCTTCCAGTTGTTCCATAGTAGGAAGGCCGCCGCCGCGATCGCCAGATCACTAGGCCAATTGGATTCATGAGGAGTGCACGGCCAAGATTGACCACAGTCATCACAAGATAAGTTCCCATACGCGCTATCCATGGGATCAGCGGTG
 173 quality 0x0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B09090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B05050505050E0505050505050505050505050505050505050505050505050505050505050505050505030303030303030303030909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090909090B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B0B
 174 asmbl_id        144
 175 seq_id
 176 com_name
 177 type
 178 method  asmg
 179 ed_status
 180 redundancy      1.05
 181 perc_N  0.10
 182 seq#    2
 183 full_cds
 184 cds_start
 185 cds_end
 186 ed_pn   GRA
 187 ed_date 08/25/07 22:59:00
 188 comment
 189 frameshift
 190
 191 seq_name        SDSU_RFPERU_013_H05.x01.phd.1
 192 asm_lend        1
 193 asm_rend        589
 194 seq_lend        1
 195 seq_rend        589
 196 best    0
 197 comment
 198 db      sdsu
 199 offset  0
 200 lsequence       AGCGCCGATACACATGCTCAAACCGCGCATCGAAGTCTTCGATCAAGACGCTGAAGTAGTAGCCGTCCATGTTGAAGTTGAGCGGCTGACCGGCGTCACGCAGCGTCTCCAGCTCCGTGACGCGGTCACCAGCTGTCGCGCCAGTGATCCAGCCAGACCACTGGATGTTCTTGTAATCCAGACCGAGAACATCGACAACACGCTTGCCGCCTACCAGTTTGTGCACCACGAGCTTCTGTTTGGCGCCGATCGATACTGACTCTGGGACTTCCAGGCCGGTGAACTCGACATCTCCAACGATCAACCGCGTGGCAAACGGATCCCCGCCCGGAGCGAAGTTGTCCAGGAAGCTCGTAAAGCTCATCGTTTATCCCCTTGGATAGGCTGCGCTCGGGGTTCCTGGCATCAGCATGCTGCGGTTCGGATCGAAGCCCTGCGTCCCTGTCCGTGGCTTCGCGGCTTCCTTCGCCATCCGCTGGATTACCACGTCGCTGACTTGTTTGCCGTCGATGTACAGGTTGATGTTCTGTTGGCCATCGGCGCCAGACTTGCCCGGGACCGGAGCCACCAGCGGAGACCATGCTGGCTT
 201
 202 seq_name        SDSU_RFPERU_005_F02.x01.phd.1
 203 asm_lend        539
 204 asm_rend        963
 205 seq_lend        1
 206 seq_rend        424
 207 best    0
 208 comment
 209 db      ABC
 210 offset  538
 211 lsequence       GGCGC-AGACTTGCCCGGGACCGGAGCCACCAGCGGAGACCATGCTGGCTTTTTCTCCCCGCTTCCACGGAAATCATCGGCGAATGTAGGTTTTTGAGATCTGCATCGATGCTGGAAGAATCAGGTTTGCGCCAGCGATCAGCGTGTTGAAGATCGTCTGCCAGCCGGTCAAGAAGACCAGAGCAAATGACTTGAATGCGCCGCCGATATCGCCCTGAAAGAGTTTTACAAACCCGGTCTTCATGTCGTTCCACATGAGCTTCAATGCTCCGCTGATCTCCTTCCAGTTGTTCCATAGTAGGAAGGCCGCCGCCGCGATCGCCAGATCACTAGGCCAATTGGATTCATGAGGAGTGCACGGCCAAGATTGACCACAGTCATCACAAGATAAGTTCCCATACGCGCTATCCATGGGATCAGCGGTG
 212 |
 213 sequence        ATTGCCATTCTTTCGAAGCGCATTCCCTCTCGTGGCGCTGGCTTCCAGGATCTTTTGGAAGCGCATTCGACGCAACACACCTGCCCGTTTGGGCCGGCCCAACTGGTTCGCAGTGGTAGTGATAGAGGTACTGGTCAATCTGCTTTAATCGACATGAAGATGACGCGAAAAGCGCCCTCCTGCGGATCCGGATCCGTCGCTCACCTGGTCTTGAATGACCTGATGTTCGCAGCCATGGAAGCCGGTTACCGGCTTGCGCCAATCAAGGCAGCATGCACTGCTGAGCAAAAAGCGAGCCAAACTTGTGACCTGATGGCCTTACGCAAT
 214 lsequence       ATTGCCATTCTTTCGAAGCGCATTCCCTCTCGTGGCGCTGGCTTCCAGGATCTTTTGGAAGCGCATTCGACGCAACACACCTGCCCGTTT-GGG-CCGGCCC-AACTGGTTCGCAGTGGTAGTGATAGAGGTACTGGTCAATCTGCTTTAATCGACATGAAGATGACGCGAAAAGCGCCCTCCTGCGGATCCGGATCCGTCGCTCACCTGGTCTTGAATGACCTGATGTTCGCAGCCATGGAAGCCGGTTACCGGCTTGCGCCAATCAAGGCAGCATGCACTGCTGAGCAAAAAGCGAGCCAAACTTGTGACCTGATGGCCTTACGCAAT
 215 quality 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
 216 asmbl_id        652
 217 seq_id
 218 com_name
 219 type
 220 method  asmg
 221 ed_status
 222 redundancy      2.75
 223 perc_N  0.00
 224 seq#    9
 225 full_cds
 226 cds_start
 227 cds_end
 228 ed_pn   GRA
 229 ed_date 08/27/07 18:38:59
 230 comment
 231 frameshift
 232
 233 seq_name        9986984
 234 asm_lend        1
 235 asm_rend        102
 236 seq_lend        1
 237 seq_rend        105
 238 best    0
 239 comment
 240 db      sdsu
 241 offset  0
 242 lsequence       ATTGCCATTCTTTCGAAGCGCATTCCCTCTCGTGGCGCTGGCTTCCAGGATCTTTTGGAAGCGCATTCGACGCAACACACCTGCCCGTTTCGGGTCCGGCCCGAA
 243
 244 seq_name        9944760
 245 asm_lend        2
 246 asm_rend        109
 247 seq_lend        108
 248 seq_rend        1
 249 best    0
 250 comment
 251 db      ABC
 252 offset  1
 253 lsequence       TTGCCATTCTTTCGAAGCGCATTCCCTCTCGTGGCGCTGGCTTCCAGGATCTTTTGGAAGCGCATTCGACGCAACACACCTGCCCGTTT-GGG-CCGGCCC-AACTGGTTC
 254
 255 seq_name        9980040
 256 asm_lend        48
 257 asm_rend        154
 258 seq_lend        1
 259 seq_rend        107
 260 best    0
 261 comment
 262 db      ABC
 263 offset  47
 264 lsequence       GGATCTTTTGGAAGCGCATTCGACGCAACACACCTGCCCGTTT-GGG-CCGGCCC-AACTGGTTCGCAGTGGTAGTGATAGAGGTACTGGTCAATCTGCTTTAATCGACA
 265
 266 seq_name        9956706
 267 asm_lend        50
 268 asm_rend        146
 269 seq_lend        97
 270 seq_rend        1
 271 best    0
 272 comment
 273 db      ABC
 274 offset  49
 275 lsequence       ATCTTTTGGAAGCGCATTCGACGCAACACACCTGCCCGTTT-GGG-CCGGCCC-AACTGGTTCGCAGTGGTAGTGATAGAGGTACTGGTCAATCTGCTTT
 276
 277 seq_name        9937790
 278 asm_lend        84
 279 asm_rend        191
 280 seq_lend        1
 281 seq_rend        108
 282 best    0
 283 comment
 284 db      ABC
 285 offset  83
 286 lsequence       CCCGTTT-GGG-CCGGCCC-AACTGGTTCGCAGTGGTAGTGATAGAGGTACTGGTCAATCTGCTTTAATCGACATGAAGATGACGCGAAAAGCGCCCTCCTGCGGATCCGG
 287
 288 seq_name        9976538
 289 asm_lend        120
 290 asm_rend        215
 291 seq_lend        1
 292 seq_rend        96
 293 best    0
 294 comment
 295 db      ABC
 296 offset  122
 297 lsequence       TGATAGAGGTACTGGTCAATCTGCTTTAATCGACATGAAGATGACGCGAAAAGCGCCCTCCTGCGGATCCGGATCCGTCGCTCACCTGGTCTTGAA
 298
 299 seq_name        9960711
 300 asm_lend        134
 301 asm_rend        229
 302 seq_lend        1
 303 seq_rend        96
 304 best    0
 305 comment
 306 db      ABC
 307 offset  136
 308 lsequence       GTCAATCTGCTTTAATCGACATGAAGATGACGCGAAAAGCGCCCTCCTGCGGATCCGGATCCGTCGCTCACCTGGTCTTGAATGACCTGATGTTCG
 309
 310 seq_name        9962187
 311 asm_lend        178
 312 asm_rend        273
 313 seq_lend        1
 314 seq_rend        96
 315 best    0
 316 comment
 317 db      ZZZ
 318 offset  180
 319 lsequence       TCCTGCGGATCCGGATCCGTCGCTCACCTGGTCTTGAATGACCTGATGTTCGCAGCCATGGAAGCCGGTTACCGGCTTGCGCCAATCAAGGCAGCA
 320
 321 seq_name        9970175
 322 asm_lend        239
 323 asm_rend        327
 324 seq_lend        1
 325 seq_rend        89
 326 best    0
 327 comment
 328 db      ABC
 329 offset  241
 330 lsequence       AAGCCGGTTACCGGCTTGCGCCAATCAAGGCAGCATGCACTGCTGAGCAAAAAGCGAGCCAAACTTGTGACCTGATGGCCTTACGCAAT