branch-1-6/t/data/roa1_v2.dat

   1 ID   X79536; SV 1; linear; mRNA; STD; HUM; 1198 BP.
   2 XX
   3 AC   X79536;
   4 XX
   5 DT   03-JUN-1994 (Rel. 39, Created)
   6 DT   18-APR-2005 (Rel. 83, Last updated, Version 2)
   7 XX
   8 DE   H.sapiens mRNA for hnRNPcore protein A1
   9 XX
  10 KW   core protein.
  11 XX
  12 OS   Homo sapiens (human)
  13 OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
  14 OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
  15 OC   Homo.
  16 XX
  17 RN   [2]
  18 RP   1-1198
  19 RA   Leffers H.;
  20 RT   ;
  21 RL   Submitted (01-JUN-1994) to the EMBL/GenBank/DDBJ databases.
  22 RL   H. Leffers, Inst. of Medical Research Biochemistry & Danish Centre for
  23 RL   Human Genome Research, Ole Worms Alle 170, Aarhus Univ., 8000 Aarhus C,
  24 RL   DENMARK
  25 XX
  26 RN   [3]
  27 RA   Knudsen S.M., Leffers H.;
  28 RT   "Cloning and sequencing of a splice variant of human hnRNP core protein
  29 RT   A1";
  30 RL   Unpublished.
  31 XX
  32 DR   H-InvDB; HIT000323756.
  33 XX
  34 FH   Key             Location/Qualifiers
  35 FH
  36 FT   source          1..1198
  37 FT                   /organism="Homo sapiens"
  38 FT                   /mol_type="mRNA"
  39 FT                   /clone_lib="lambda ZapII"
  40 FT                   /clone="HDP1"
  41 FT                   /cell_line="MRC5"
  42 FT                   /cell_type="fibroblast"
  43 FT                   /tissue_type="lung"
  44 FT                   /db_xref="taxon:9606"
  45 FT   CDS             27..989
  46 FT                   /product="hnRNPcore protein A1"
  47 FT                   /db_xref="GDB:127388"
  48 FT                   /db_xref="GOA:P09651"
  49 FT                   /db_xref="HGNC:5031"
  50 FT                   /db_xref="InterPro:IPR000504"
  51 FT                   /db_xref="InterPro:IPR012677"
  52 FT                   /db_xref="PDB:1HA1"
  53 FT                   /db_xref="PDB:1L3K"
  54 FT                   /db_xref="PDB:1PGZ"
  55 FT                   /db_xref="PDB:1PO6"
  56 FT                   /db_xref="PDB:1U1K"
  57 FT                   /db_xref="PDB:1U1L"
  58 FT                   /db_xref="PDB:1U1M"
  59 FT                   /db_xref="PDB:1U1N"
  60 FT                   /db_xref="PDB:1U1O"
  61 FT                   /db_xref="PDB:1U1P"
  62 FT                   /db_xref="PDB:1U1Q"
  63 FT                   /db_xref="PDB:1U1R"
  64 FT                   /db_xref="PDB:1UP1"
  65 FT                   /db_xref="PDB:2UP1"
  66 FT                   /db_xref="UniProtKB/Swiss-Prot:P09651"
  67 FT                   /protein_id="CAA56072.1"
  68 FT                   /translation="MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV
  69 FT                   MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV
  70 FT                   KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV
  71 FT                   IQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNF
  72 FT                   SGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNF
  73 FT                   GGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF"
  74 FT   misc_feature    995
  75 FT                   /note="alternative splice site"
  76 FT   polyA_signal    1180..1185
  77 XX
  78 SQ   Sequence 1198 BP; 334 A; 216 C; 336 G; 312 T; 0 other;
  79      ttaaagtctc tcttcaccct gccgtcatgt ctaagtcaga gtctcctaaa gagcccgaac        60
  80      agctgaggaa gctcttcatt ggagggttga gctttgaaac aactgatgag agcctgagga       120
  81      gccattttga gcaatgggga acgctcacgg actgtgtggt aatgagagat ccaaacacca       180
  82      agcgctctag gggctttggg tttgtcacat atgccactgt ggaggaggtg gatgcagcta       240
  83      tgaatgcaag gccacacaag gtggatggaa gagttgtgga accaaagaga gctgtctcca       300
  84      gagaagattc tcaaagacca ggtgcccact taactgtgaa aaagatattt gttggtggca       360
  85      ttaaagaaga cactgaagaa catcacctaa gagattattt tgaacagtat ggaaaaattg       420
  86      aagtgattga aatcatgact gaccgaggca gtggcaagaa aaggggcttt gcctttgtaa       480
  87      cctttgacga ccatgactcc gtggataaga ttgtcattca gaaataccat actgtgaatg       540
  88      gccacaactg tgaagttaga aaagccctgt caaagcaaga gatggctagt gcttcatcca       600
  89      gccaaagagg tcgaagtggt tctggaaact ttggtggtgg tcgtggaggt ggtttcggtg       660
  90      ggaatgacaa cttcggtcgt ggaggaaact tcagtggtcg tggtggcttt ggtggcagcc       720
  91      gtggtggtgg tggatatggt ggcagtgggg atggctataa tggatttggc aatgatggaa       780
  92      gcaattttgg aggtggtgga agctacaatg attttgggaa ttacaacaat cagtcttcaa       840
  93      attttggacc catgaaggga ggaaattttg gaggcagaag ctctggcccc tatggcggtg       900
  94      gaggccaata ctttgcaaaa ccacgaaacc aaggtggcta tggcggttcc agcagcagca       960
  95      gtagctatgg cagtggcaga agattttaat tagggaggag tctgctacta gtcttatcag      1020
  96      ctcttaaaaa cagaaactca tctgtccaag ttcgtggcag aaaggaacgt ccttgtgaag      1080
  97      acctttatct gagccactgt acttcgttat cacgccatgc agtttacatg agctgttctg      1140
  98      cagctcgaaa ttccattttg tgaatgggtt ttttttttta ataaactgta tttaactt        1198
  99 //