tag fourth (and hopefully last) alpha
[bioperl-live.git] / branch-1-6 / t / data / map_hem / HEM1-HEM4.fa
blobf544187d01a530b44f8fb070964439da28614588
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 ACTGAAAAAAAAACCTAAGTACTGTTATGATTATTGAGGGACAACAACTAGCTCTATTAG
3 TTTTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTGGG
4 ATAAAAAAAAAAGAAACGCGAGCTGAGAAGGGAAGGCGTGTAAAGGAAGAACGGTTGAGA
5 GACAGCAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGAATGGAGAAG
6 TTTGGTATGATGCAAACGTTGTATTTCTAACAACGCATGGATCAGAACAATGGGCAAGGC
7 AAGATGAAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCC
8 CGCGGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGCGGTAGGGTAAGCCGTGC
9 AGGCAAGCTTATTATAGCACCGTCGGGGGTACCACCACTATATCAAACTCCACTGCTCGG
10 TAAAGCATTGTAGTGAAG
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 ACTGAAAAAAAACCAAGTACTGTTGTGATTATTGAGGGACAACGGCTAGCTCTATTTGTT
13 TTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTAGGAT
14 AAAAAAAGAAACGCGAGCTGAGAAGAGAAGGCGTGTAAAGGAAGAACGGTTGAGAGAGAG
15 CAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGGATGGAGGAGTTTGG
16 TACGATGCAAACGCTATATTTGTAGCAACGCATGGGTCAGAACAATGGGCAAGGCAAGAT
17 GAAAAATTTCTGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGCGG
18 CCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGTGGTAGGGTAAGCCGTGCAGGCA
19 AGCTTATTATAGCACCGTCGGGGGGACCACTATATCAAGTTCCACAGCACGGTGAAGCAT
20 TGCAGTATAGTTCACAGC
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 ACCGAGAGAAAAACTAAGTAGTGATATGATTATTGAGGACTAATGACCAGCTTTGTTTGT
23 TTTTTCTTCCAACCTAACTTATATGGGAAATATATAGGACAGAAAAAAGAAAAGAGCACG
24 AAAAAAAAGAAATGCGACCTGAGAAGGGAGGACGTGTGAAGCCAGAACGGTTGAATGACA
25 GTAGAGGAGGGTGCAACACAACCGAGTAGAGTACCAGCTGACGGAATGGAGGAGTTTGGT
26 ATGATGCAAAAGTGATGCTTTTAGCAACGCAACATTGAATTAGAACAATGGGCAAGGCAA
27 GATGAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGC
28 AAGCGCAGACCAATGAGCGACGAAAGCGGCCTTTTGAAGGGTAGGGTAATCCATGCAGGC
29 AAGTTTATTATAGCACCGTCGGGGGGAAGCATTATATCAAACTCCACAGTACAGCGTAAC
30 ATTGCTGTATAGGCTACA
31 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
32 ACTGAAAATAATCCGAGTCGTGCTACTGTGAATATTGAGAATAGGGACTAGCTCTATTTG
33 ATTTTTCTTCCAACCAAACTTATATGGAAAATATAAAGGAAAGAAAAAAGAAAAGAATAG
34 GAAAAAAAAAAAGAAACGCGAGAGAAGAGAACCGTGTGGAGGGAAGAACGGTTGAGAGAC
35 AGCAGAGCACAGCGCAACACAACCGAGTAGAGTACCAGCAGACGGAGTGGGTAGTTTGGT
36 ACAGTGTAAAAGCTATATTTCCACCAACGCAACACTGGATCGGAACAATGGGCAAGGCAA
37 TGTGAAAAATTTCCGTTCCTGCTCTTGCTTCATATATGACAATGACCAAAAAGCGTCCGC
38 GGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCGTAGCAGCAGGGTAAGCCGCGCAAG
39 CAAGTCCGTCATAACACCGTCGAAGGGGCACCACTATATCAGCTCTTCAGCATGGTAGGC
40 CATTACAGCACAGTCTTG
41 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
42 ACTAAAAAGTCCAAGTGGTGCTGTTATTATTGAGGATAGCAACTAGCTTTATTTGTTTTT
43 TCTTCCAACCAAACTTATATGGAAATCAAAGGAAGGAAAAAAAGAAAAGAACAGGAAGAA
44 AAAAAAGAAACGTGAGCTGCCGAAAGGAGAGCGTGTGGAGGGAAGAACCGTTGAGAGACA
45 ACAGAGCAGGGTGCAAACCGATTAGAGTACCAGCAGACGAGATGGGCGATGTGGTACGGT
46 GCAGAAGGTGTGGTTCCAACAGCGCAGCACCGGGACAGAACAATGGGCAAGGCAAGATGA
47 AAAATCTCCGTTCCTGCTCTTGCTTGATATATTAACAATGACCAAAAAAACGCCGGCGGG
48 CGCAGACCAATGAGCGACGAAGACGGCTTTTGGGCGGGGCAGGGTAAGATGGGACAGGCA
49 AGGTCCGCTATAGCACCGTCGAGGGGGACCGCTATATCAGCTCCCAGTACATTGCAGCAC
50 ACTCTATAGCTAGTCAAA
51 >SGD_Scer_YOR278W HEM4 "Uroporphyrinogen III synthase, catalyzes the conversion of hydroxymethylbilane to uroporphyrinogen III, the fourth step in the heme biosynthetic pathway"
52 CTCTCGAGCAAGGTCTATTTTACCTTTCTGTTTCCTTATCCTTTGACACTAAAATTCAAA
53 AAACTCACTAGAAAGTTCACTAAAGCGCCTTAGCTGACTACAGCACAACCCAACCCCAAA
54 AACTAGTGAACTACACACTAAGAGAATTTATGGTATTTCCATAATTGAAGTATATGTACG
55 ATGTATACAATGTAAACAAGAGAGTAATGAAGTGAAGATATGTACACCTAGAGCGAACCA
56 ATGATAATTTGTTTTCTTAATTAAGAAAAACCATTAAAACTGGATTAGATTTCAATAATG
57 AAAAGCTAGGAACAAAAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGACATA
58 TGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGTTTT
59 CTTATCCTGAAGGATCCTGCAAATGAAGTAAGTTCAAAGAATTGAAATGAAATCGCCTTT
60 TATACCCTCGCCGCACCAAGGAGCGCGCTGTGAAAATTTTTCGCTTTATCTCTTAGGGCT
61 CCTACTGTCGGTAGAGAAAAGTTGAGTATATTTAAAGCATGAGGTAACTTTTCTGCCCAT
62 TTTTACTTCTATTTCCATTTGAATTCAGAAAAGTG
63 >MIT_Spar_c261_21317 YOR278W 5' untranslated region, Contig c261 32269 - 34268, 2000 bp (revcom)
64 CGTTCCAAGCAGGGTTTATTCTATTTCTCGGCTCCTTTACCCTGTAACTTCGAGATTCAA
65 AAACTCGCTATAACTTCACTAAAGCGCTTTAGTTGACTACAACACAACCCAACCCCAAAA
66 TAAACTGTCCAACTACACAATACCGAGGATAATCCACGATATTTCGGTGATTGAAGTATA
67 TGTATTACGTATGCAATGTAAGCAAGAAACTAACAAAATGAATATGTACACCTAGAGCGA
68 ACCAATGATAATTTGTTTTCTTAATAAAGAAAAACTATTAAAACTGGATTAGATTTCAAT
69 AATGAAAAGCTAGGAACAGAAAAATTGGTCTACTTCCAGCCATTTGCGCTTTATATAGAC
70 ATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGGT
71 TCTTTTATCCTGAAGGATAAACGGAAAGCTCCCGATTAAAAACAAGTATAGAGTACTGGA
72 ATAGAATCGCCTTTTATACCCTCCCTCGCCGCATCAAGAAGCGCGCTGTGAAAATTTTTC
73 GTTTTTCTCTTAGGGCTCCCATCCAACTGTCGGCGAGGAAAAGTTGTATATATTTAAAGC
74 ATGAGGTAACTTTGTTGCCCATTATCTTTTTTGTT
75 >MIT_Smik_c492_20940 YOR278W 5' untranslated region, Contig c492 3260 - 5259(revcom), 2000 bp (revcom)
76 ACTTTCAAACACACTCTGGTGTACTCCTCGGTCCCTTCATCTCATTTCTTCAAGATGCAG
77 AACTTCGCCGGAAGTAAACTAAAGTGCTTTAATTAATCAAAAGACAACTTAATTCCCAAA
78 CGGAAATGCAGGCTAGACAAACCGAAGATAATCCCCGATATTTCTGAGTTTAACAAATGT
79 ATGTATAATATGTATGCAATGTAGGCAAGAAAATAACGAAGTGAAGATATGTACACCTAG
80 AGCGAACCAATAATAATTTGTTTTCTTACTAAAGAAAAACTATTAAAACTGGATTAGATT
81 TCAATAATGAAAAGCTAGGAACAAAAGAAATTTGTCTACTTCCAGCCATTTGCGCTTTAT
82 ATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAAT
83 GATGGTTCTTTTAAACCAAAATTTAAAGAAAAATCTTAACGGTAATATGAGTAGGAGGTT
84 GGAATGGGATCGCTTTTTATACCCTCATTGTGATAAGAGACGCGCAGTGAAAAATTTTCG
85 CTTTTTCTTAGGGCTCCTATCTAACTCTCGGGCGAATAAATATCATGAATGTATTTAAAC
86 GTCAAGTTAGTTAAATGTTTGAGTCTGTTTCTTTT
87 >WashU_Skud_Contig1682.4 YOR278W 5' untranslated region, Contig c1682 3379 - 5378, 2000 bp (revcom)
88 CTCTTCAAACAGACTCCAATTCACTACTGAGCTCTTACCTTGTGACTTCAAGACTCACTA
89 CTCAGTTGAAAGACACGCTCAGTACCAAATTCGGCTGCGAGGCAACTAACGCCTTTAAAC
90 AGGTAGGTAAGGAACAATACCGAAAGGCCATCTCCGATGTTTCGAAGATTGGCAAATGTA
91 TATATTATGTATGCAATATAGGCAAGATGATAACGAAGTAGAGATATGTACACCTAGAGC
92 GAACCAATGATAATTTGTTTTCTTAATGAAGAAAGTATTAAAACTGGATTAGATTTCAAT
93 AATGAAAAGCTAGGAATAAAAGAGATTGGTCTACTTCCAGCCATTTGCGCTTTACATAGA
94 CATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGAATGATGG
95 TTCTATTTAAAATGAAATCTAAAGATAAACCCTAGTCATAATCAAGTGGGTTGTGTTAAA
96 ATACAAGCACCTTTTATACTCTCGCAGCGTCAGTGGCGCGTTGTGAAAAATTTTCACTTT
97 TTCTCAGGGCTTTTACCCAACTGCCGACAAATAAAAGCCGTATTTAAGGAATGTGATTAG
98 TTTACTTTCCAATGCTTTCTCTTTTTTGTAGGGTA
99 >WashU_Sbay_Contig635.57 YOR278W 5' untranslated region, Contig c635 91073 - 93072, 2000 bp (revcom)
100 ACGTACAGATGGCGTCTCCTCCTTTCGCGAGCCCCTTGCCTTGTGACTTCAGCCTAACTT
101 CTTGACTAGAAGATACAACAAGAAATACTCAAATCGGTTATTGTGCAACTCATCCCTCAG
102 ACAGTTTGGTAAGAAACACCGAAGACTATTTCCGATATCTCAAAGAATGACAAAAGTATA
103 CATTATATATGCAAGAGAGGCAAGAAAAGAGTAAAAAAGAGTAAAAAAAACATGTACACC
104 TAGAGCGAACCAGTGATAATTTGCTTCTCAATGAAGAAAAAGCGATTAAAACTGGATTAG
105 ATTTCATTAAAGAAAAGCTAGGAACAAAGAAATTGGTCTACTTCCAGCCATTTGCGCTTG
106 ACATAGACATATGGAGGCGTGATGTCTTAAGCATGGTAATCCGGAAGATCAGTTTATTGA
107 ATGATGGCTCTTTTAAATTGAGATCTAAAAGAAATATCCTGGAAAAGAGTAGAGAAGAGT
108 CCAAACTGTAGGAATTCAATCGCTTTTTATACTCTCATCGCGGAAAAGACGCGCTGTGAA
109 AAATTTTCTCTTTTTCTTAGGGCTCCTATCCAGCTGCCTGCGAACAAAAGCCGTATTTAA
110 AGCATGATTTTCACTACTATGTATGTTCTTTCTGC