2 ;;; Copyright (c) 2005--2007, by A.J. Rossini <blindglobe@gmail.com>
3 ;;; See COPYRIGHT file for any additional restrictions (BSD license).
4 ;;; Since 1991, ANSI was finally finished. Edited for ANSI Common Lisp.
7 (:documentation
"Experimentation package for LispStat. Serious work
8 should be packaged up elsewhere for reproducibility.")
10 :lisp-stat-object-system
11 :lisp-stat-probability
16 :lisp-stat-compound-data
18 :lisp-stat-regression-linear
)
19 (:shadowing-import-from
:lisp-stat-object-system
20 slot-value call-method call-next-method
)
21 (:shadowing-import-from
:lisp-stat-math
22 expt
+ -
* / ** mod rem abs
1+ 1- log exp sqrt sin cos tan
23 asin acos atan sinh cosh tanh asinh acosh atanh float random
24 truncate floor ceiling round minusp zerop plusp evenp oddp
25 < <= = /= >= > complex conjugate realpart imagpart phase
26 min max logand logior logxor lognot ffloor fceiling
27 ftruncate fround signum cis
)
37 fixnump check-nonneg-fixnum check-one-fixnum
38 check-one-real check-one-number
46 compound-data-p
*compound-data-proto
* compound-object-p
47 compound-data-seq compound-data-length
48 element-list element-seq
50 recursive-map-elements map-elements
53 get-next-element make-next-element set-next-element
60 ^
** expt
+ -
* / mod rem pmin pmax abs
1+ 1- log exp sqrt sin cos
61 tan asin acos atan sinh cosh tanh asinh acosh atanh float random
62 truncate floor ceiling round minusp zerop plusp evenp oddp
< <= =
63 /= >= > complex conjugate realpart imagpart phase min max
64 logand logior logxor lognot ffloor fceiling ftruncate fround
68 matrixp num-rows num-cols matmult identity-matrix diagonal row-list
69 column-list inner-product outer-product cross-product transpose
70 bind-columns bind-rows
73 chol-decomp lu-decomp lu-solve determinant inverse sv-decomp
74 qr-decomp rcondest make-rotation
75 fft make-sweep-matrix sweep-operator ax
+y numgrad numhess
78 ;; in linalg.lisp, possibly not supported by matlisp
79 spline kernel-dens kernel-smooth
85 make-rv-function make-rv-function-1
91 open-file-dialog read-data-file read-data-columns load-data
92 load-example
*variables
* *ask-on-redefine
* def variables savevar
93 undef standard-deviation quantile median interquartile-range
94 fivnum covariance-matrix difference rseq matrix print-matrix solve
95 backsolve eigenvalues eigenvectors accumulate cumsum combine
99 log-gamma uniform-rand normal-cdf normal-quant normal-dens
100 normal-rand bivnorm-cdf cauchy-cdf cauchy-quant cauchy-dens
101 cauchy-rand gamma-cdf gamma-quant gamma-dens gamma-rand
102 chisq-cdf chisq-quant chisq-dens chisq-rand beta-cdf beta-quant
103 beta-dens beta-rand t-cdf t-quant t-dens t-rand f-cdf f-quant
104 f-dens f-rand poisson-cdf poisson-quant poisson-pmf poisson-rand
105 binomial-cdf binomial-quant binomial-pmf binomial-rand
107 ;;; Here is where we have a problem -- lispstat core should be core
108 ;;; data management and config problems, with packages providing
109 ;;; specialized extensions to LispStat, i.e. regression, nonlin
110 ;;; regression, bayesian regression via laplace approximation, etc.
112 ;;; The following could be considered "recommended packages", similar
113 ;;; to the idea of the recommended packages in R.
116 regression-model regression-model-proto x y intercept sweep-matrix
117 basis weights included total-sum-of-squares residual-sum-of-squares
118 predictor-names response-name case-labels
121 nreg-model nreg-model-proto mean-function theta-hat epsilon
125 bayes-model bayes-model-proto bayes-internals
))
127 (defpackage :lisp-stat-user
128 (:documentation
"Experimentation package for LispStat.
129 Serious work should be placed in a similar package elsewhere for
130 reproducibility. But this should hint as to what needs to be
131 done for a user- or analysis-package.")
132 (:nicknames
:ls-user
)
135 (:shadowing-import-from
:lisp-stat
136 slot-value call-method call-next-method
138 expt
+ -
* / ** mod rem abs
1+ 1- log exp sqrt sin cos tan
139 asin acos atan sinh cosh tanh asinh acosh atanh float random
140 truncate floor ceiling round minusp zerop plusp evenp oddp
141 < <= = /= >= > complex conjugate realpart imagpart phase
142 min max logand logior logxor lognot ffloor fceiling
143 ftruncate fround signum cis