From e88be59e1245c9bde264c21044984f11d2655bb1 Mon Sep 17 00:00:00 2001 From: Stephan Saalfeld Date: Tue, 9 Feb 2010 23:18:27 +0100 Subject: [PATCH] minor cleanup in lenscorrection --- lenscorrection/DistortionCorrectionTask.java | 1 - lenscorrection/Distortion_Correction.java | 9 ++++----- lenscorrection/NonLinearTransform.java | 2 -- 3 files changed, 4 insertions(+), 8 deletions(-) diff --git a/lenscorrection/DistortionCorrectionTask.java b/lenscorrection/DistortionCorrectionTask.java index ae402c23..216f4f2a 100644 --- a/lenscorrection/DistortionCorrectionTask.java +++ b/lenscorrection/DistortionCorrectionTask.java @@ -20,7 +20,6 @@ import mpicbg.models.Tile; import mpicbg.trakem2.align.AbstractAffineTile2D; import mpicbg.trakem2.align.Align; import mpicbg.trakem2.transform.CoordinateTransform; -import mpicbg.trakem2.transform.CoordinateTransformList; import ij.IJ; import ij.gui.GenericDialog; diff --git a/lenscorrection/Distortion_Correction.java b/lenscorrection/Distortion_Correction.java index 9c72d7be..4d7c4328 100644 --- a/lenscorrection/Distortion_Correction.java +++ b/lenscorrection/Distortion_Correction.java @@ -58,9 +58,7 @@ import java.util.ArrayList; import java.util.Arrays; import java.util.Collection; import java.util.Collections; -import java.util.HashMap; import java.util.List; -import java.util.Map; import java.util.concurrent.atomic.AtomicInteger; import java.awt.Color; import java.awt.geom.AffineTransform; @@ -821,9 +819,10 @@ public class Distortion_Correction implements PlugIn{ newImg.setProcessor( newImg.getTitle(), newImg.getProcessor().convertToShort( false ) ); newImg.setProcessor( sp.names[ i + sp.firstImageIndex ], applyTransformToImageInverse( models[ index * ( sp.numberOfImages - 1 ) + count ], newImg.getProcessor() ) ); - ImageProcessor testIp = im1.getProcessor().duplicate(); - + // If you want to see the stitching improvement run this + // ImageProcessor testIp = im1.getProcessor().duplicate(); + // for ( int x=0; x < testIp.getWidth(); x++){ // for (int y=0; y < testIp.getHeight(); y++){ // testIp.set(x, y, Math.abs(im1.getProcessor().get(x,y) - @@ -846,7 +845,7 @@ public class Distortion_Correction implements PlugIn{ Collections.sort( xcorrVals ); Collections.sort( xcorrValsGrad ); - double[] medians = { xcorrVals.get( xcorrVals.size() / 2 ), xcorrValsGrad.get( xcorrValsGrad.size() / 2 ) }; +// double[] medians = { xcorrVals.get( xcorrVals.size() / 2 ), xcorrValsGrad.get( xcorrValsGrad.size() / 2 ) }; double m1 = 0.0, m2 = 0.0; for ( int i = 0; i < xcorrVals.size(); i++ ) diff --git a/lenscorrection/NonLinearTransform.java b/lenscorrection/NonLinearTransform.java index 34f48e25..2272e115 100644 --- a/lenscorrection/NonLinearTransform.java +++ b/lenscorrection/NonLinearTransform.java @@ -51,8 +51,6 @@ import Jama.Matrix; import java.io.*; -import mpicbg.trakem2.transform.TranslationModel2D; - public class NonLinearTransform implements mpicbg.trakem2.transform.CoordinateTransform{ -- 2.11.4.GIT