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2012-10-17	Ali Gholami Rudi	README: briefly introduce programs besides rangi	commit \| commitdiff \| tree
2012-10-17	Ali Gholami Rudi	README: document the new file format and mkrangi.sh	commit \| commitdiff \| tree
2012-10-17	Ali Gholami Rudi	mkrangi.sh: create rangi inputs from biological files	commit \| commitdiff \| tree
2012-10-17	Ali Gholami Rudi	rangi: skip roots without nsub colors in their neighborhood	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	test: dot files are no longer supported	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	bl2exp: extract blast e-value from blastp output	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	fastafilt: filter fasta files based on its complexes	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	meval: count the complexes containing a motif	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	rangi: -m uses matching to identify infeasible subgraphs	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	proc: fix nsub_detect() for multiple threads	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	conv: use a hash table for storing protein names	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	conv: switching to gramofone-style interaction files	commit \| commitdiff \| tree
2012-10-16	Ali Gholami Rudi	conv: fix blast threshold checking	commit \| commitdiff \| tree
2012-10-10	Ali Gholami Rudi	rangi: ignore nsub_detect() with -1 option	commit \| commitdiff \| tree
2012-10-10	Ali Gholami Rudi	rangi: early motif detection heuristic	commit \| commitdiff \| tree
2012-10-07	Ali Gholami Rudi	rangi: make the -1 argument jump sizes with at least...	commit \| commitdiff \| tree
2012-10-03	Ali Gholami Rudi	rangi: add -e to perform exhaustive search	commit \| commitdiff \| tree
2012-10-03	Ali Gholami Rudi	rangi: perform the matching only on valid nodes	commit \| commitdiff \| tree
2012-09-30	Ali Gholami Rudi	rangi: use fanmod by default	commit \| commitdiff \| tree
2012-09-29	Ali Gholami Rudi	rangi: add -f to use fanmod instead of kavosh	commit \| commitdiff \| tree
2012-09-29	Ali Gholami Rudi	conv: the final arguments of conv are the query proteins	commit \| commitdiff \| tree
2012-09-29	Ali Gholami Rudi	adopt a new file format to report motif proteins	commit \| commitdiff \| tree
2012-09-29	Ali Gholami Rudi	Makefile: changing rangi.h should force a rebuild	commit \| commitdiff \| tree
2012-09-28	Ali Gholami Rudi	rangi-0.0	commit \| commitdiff \| tree

A list-colored graph motif finder

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