From 1d84820a78698accd60ab1807be5c57f2710588c Mon Sep 17 00:00:00 2001
From: Ali Gholami Rudi <ali@rudi.ir>
Date: Wed, 17 Oct 2012 20:47:04 +0330
Subject: [PATCH] README: briefly introduce programs besides rangi

---
 README | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/README b/README
index e500b4b..ef493fe 100644
--- a/README
+++ b/README
@@ -61,3 +61,12 @@ complexes files) can be obtained from GraMoFoNe's website
 (http://igm.univ-mlv.fr/AlgoB/gramofone/).  I've already created RANGI
 input files for the networks in that page using blast2-2.2.24, which
 can be obtained from: http://ce.sharif.edu/~gholamirudi/rangi.dat.tar.gz
+
+OTHER PROGRAMS
+==============
+
+* meval: counts the number of complexes containing a motif
+* genrq: generate random queries from a network
+* fastafilt: create a new FASTA based on the given complexes (mkrangi.sh)
+* bl2exp: extract blast E-values (mkrangi.sh)
+* conv: create RANGI input files from bl2exp output and queries (mkrangi.sh)
-- 
2.11.4.GIT