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generalize BlockGenerator to work with string keys
2009-09-09 Christopher Leegeneralize BlockGenerator to work with string keys
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2009-09-09 Christopher Leefixed small syntax error
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2009-09-09 Christopher Leeadded CursorCloser() mechanism
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2009-09-09 Christopher LeeBlockGenerator now working
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2009-09-09 Christopher Leefixes to prevent unnecessary invocation of cmp()
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2009-09-09 Christopher Leefixes to prevent unnecessary invocation of iter()
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2009-09-09 Christopher Leemore tests for unwanted iteration
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2009-09-09 Christopher Leebasic call for block generator based iter
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2009-09-09 Christopher Leeadded test for unwanted iteration
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2009-09-09 Christopher Leefirst implementation of BlockGenerator iteration mechanism
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2009-09-09 Christopher Leemake itervalues / iteritems use same orderBy rules
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2009-09-09 Christopher Leegeneralized iter_keys(), added orderBy support
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2009-09-08 Christopher Leecreated MySQLServerInfo class that uses SSCursor for...
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2009-09-08 Christopher Leeadded useStreaming option to mysql_connect()
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2009-09-08 Christopher Leefixed new_cursor() to propagate arraysize setting properly
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2009-09-05 Christopher Leeadded test for bug 84
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2009-09-05 Christopher Leefixed bug 84
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2009-09-05 Christopher Leeadded test for GraphView keys / len only reflecting...
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2009-09-05 Christopher Leeadded inverse support for GraphView
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2009-09-05 Christopher Leeadded test for GraphView inverse and improved MapView...
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2009-09-05 Christopher Leemake GraphView raise KeyError if key has no rows in...
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2009-09-05 Christopher Leeadded tests for MapView iterators and len
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2009-09-05 Christopher Leeavoid possible iter / keys infinite loop
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2009-09-05 Christopher Leeadded lots of tests for graphs with nodes instead of...
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2009-09-05 Christopher Leecorrected the SQLGraph iterator methods and improved...
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2009-09-05 Christopher Leetestutil needed new name of get_name_cursor()
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2009-09-05 Christopher Leemade get_name_cursor() use DBServerInfo
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2009-09-05 Christopher Leeadded iteration test to graph_test.py
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2009-09-05 Christopher Leeuse new iter_keys() method
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2009-09-05 Christopher Leeadded better iter method
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2009-09-04 Christopher LeeMerge commit 'remotes/ctb/xmlrpc_patches'
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2009-09-04 Christopher LeeMerge commit 'remotes/mkszuba/fink'
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2009-09-04 Christopher Leeremoved tests/oldtests/nlmsa_dm2_megatest.py
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2009-09-04 Christopher LeeMerge commit 'remotes/mkszuba/docfixes'
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2009-09-04 Christopher LeeMerge commit 'remotes/mkszuba/cleanup'
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2009-09-04 Christopher LeeMerge commit 'remotes/mkszuba/bsddb_bsddb3'
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2009-09-04 Christopher Leecorrected ClassicUnpickler reference to point to classutil...
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2009-09-04 Christopher Leeremoved unused shelve import
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2009-09-04 Christopher Leeremoved unused import item
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2009-09-04 Christopher LeeMerge branch 'tutorial'
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2009-09-04 Christopher Leeadded argument to make MapView inverse able to reconstitute...
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2009-09-04 Christopher Leeadded test of len() method for SQLTable
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2009-09-04 Christopher Leeadded db tutorial (mapping) back to guidelist table...
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2009-09-04 Christopher Leemapping tutorial just covers mappings, so removed reference...
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2009-09-04 Christopher Leeadded MapView inverse example to tutorial
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2009-09-04 Christopher Leeadded MapView docs
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2009-09-04 Christopher Leeadded test for trapping non-invertible MapView
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2009-09-04 Christopher Leeadded test for __invert__ method to MapView
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2009-09-04 Christopher Leeadded __invert__ method to MapView
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2009-09-04 Christopher Leeadded material on SQL MapView
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2009-09-04 Christopher Leeadded sections on mapping to disk / worldbase
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2009-09-04 Christopher Leechanged title of xmlrpc tutorial
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2009-09-04 Christopher Leeminor fixes to gene tutorial
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2009-09-04 Christopher Leemoved material out of worldbase.rst to worldbase2.rst
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2009-09-04 Christopher Leeseparate tutorial on saving data to worldbase
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2009-09-04 Christopher Leemoved schema material to worldbase2.rst tutorial
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2009-09-03 Christopher Leeadded worldbase security warning
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2009-09-03 Christopher Leemore revisions about downloading tutorial
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2009-09-03 Christopher Leerevisions to download=True section
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2009-09-03 Christopher Leeadded dependency section in worldbase.rst tutorial
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2009-09-03 Christopher Leeadded worldbase.dir() tutorial
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2009-09-03 Christopher Leeadded intro section to worldbase.rst tutorial
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2009-09-03 Christopher Leeadded Purpose to alignment.rst
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2009-09-03 Christopher Leemore little changes to annotation2.rst
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2009-09-03 Christopher Leeadded Purpose and intro to annotations2.rst
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2009-09-03 Christopher Leemoved new basic tutorials to top of guide list
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2009-09-03 Christopher Leeminor fix to db_basic.rst
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2009-09-03 Christopher Leeupdates to reference/sqlgraph.rst docs
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2009-09-03 Christopher Leeadded SQL saving section to db tutorial
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2009-09-03 Christopher Leebasic database tutorial
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2009-09-03 Christopher Leeadded back __len__() to SQLTableBase. How in heck...
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2009-09-03 Christopher Leeadded section on PrefixUnionDict
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2009-09-02 Christopher Leeadded section on plugging in your own sequence parser
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2009-09-02 Christopher Leemoved old material out to compgenomics.rst
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2009-09-02 Christopher Leesome minor sequence tutorial revisions
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2009-09-02 Christopher Leeadded tutorial section on accessing sequence database...
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2009-09-02 Christopher Leesplit up bullet points to integrate into the code example
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2009-09-02 Christopher Leerevised sequence tutorial intro (first part)
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2009-09-02 Christopher LeeMerge commit 'remotes/ctb/xmlrpc_tutorial' into tutorial
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2009-09-02 Christopher LeeMerge commit 'remotes/ctb/doc_alignment' into tutorial
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2009-09-02 Christopher Leerevised gff3 code
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2009-09-02 Christopher Leeadded GFF3 example of gene building
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2009-09-01 Christopher LeeMerge commit 'remotes/mkszuba/xmlrpc_tutorial' into...
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2009-09-01 Christopher LeeMerge commit 'remotes/ctb/doc_annotations' into tutorial
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2009-09-01 Christopher Leeextracted material for separate database tutorial
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2009-08-29 Christopher Leeremoved unnecessary stat and shutil import from setup.py
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2009-08-14 Christopher Leefixed easy_install bug by protecting coordinator.ResourceFil...
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2009-08-04 Christopher Leefixed blast_test: renamed test_seq_without_db() to...
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2009-08-04 Christopher LeeMerge commit 'remotes/ctb/minor_fixes' into minor_fixes
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2009-08-04 Christopher Leefix port passing in testutil.TestXMLRPCServer
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2009-08-04 Christopher Leeuse pair_identity_tuple() for blast_test formatting...
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2009-08-04 Christopher Leeadded BlastBase.tearDown() to close seqdbs as they...
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2009-08-04 Christopher LeeMerge commit 'remotes/mkszuba/doc_make'
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2009-08-04 Christopher LeeMerge commit 'remotes/mkszuba/rpm'
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2009-07-29 Christopher Leegot rid of BlastMapping.warn_about_self_matches()
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2009-07-29 Christopher Leechanged NLMSA pairwiseMode to allow reporting of self...
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2009-07-29 Christopher LeeMerge commit 'remotes/mkszuba/debian'
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2009-07-29 Christopher Leeretry reading port_file in TestXMLRPCServer several...
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2009-07-29 Christopher Leeadded comments to process_blast()
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2009-07-29 Christopher Leefix problem introduced in process_blast() by commit...
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Graph database interfaces in Python