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added SQLTable_Test.test_orderBy()
2009-09-09
C
h
risto
p
her Lee
added
S
Q
LTable_Test
.
t
e
st_ord
e
rBy()
commit
|
commitdiff
|
tree
2009-09-09
Christ
o
p
her Lee
updated BlockGenerator to work with
gen
e
r
alized
o
r
derBy
.
.
.
commit
|
commitdiff
|
tree
2009-09-09
Ch
r
istopher Lee
generalize BlockGen
e
rator t
o
work with string keys
commit
|
commitdiff
|
tree
2009-09-09
Christopher L
e
e
f
ixed small syn
t
ax error
commit
|
commitdiff
|
tree
2009-09-09
Chr
i
st
o
pher Le
e
adde
d
CursorCloser() mechanism
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
B
l
ockGen
e
rator now w
o
rki
n
g
commit
|
commitdiff
|
tree
2009-09-09
C
h
ristoph
e
r Le
e
fixes to prevent unnecessary in
v
oc
a
tion of cmp()
commit
|
commitdiff
|
tree
2009-09-09
Chri
s
tophe
r
Lee
fixes t
o
preve
n
t unn
e
cessary invocation o
f
iter()
commit
|
commitdiff
|
tree
2009-09-09
Christopher
Lee
more tests
for
unwanted iteration
commit
|
commitdiff
|
tree
2009-09-09
Christopher L
e
e
basic ca
l
l for block generator ba
s
ed iter
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
added test fo
r
unwanted iteration
commit
|
commitdiff
|
tree
2009-09-09
C
h
ri
s
to
p
h
er Lee
first implementati
o
n o
f
B
l
ock
G
e
n
erator iteration mechanism
commit
|
commitdiff
|
tree
2009-09-09
Chri
s
tophe
r
Lee
mak
e
itervalue
s
/
i
teritems us
e
same orderBy rules
commit
|
commitdiff
|
tree
2009-09-09
Ch
r
is
t
opher Lee
ge
n
e
r
alized iter_keys(), added orderBy su
p
port
commit
|
commitdiff
|
tree
2009-09-08
Christopher Lee
c
reated MySQL
S
erver
I
nfo class
that uses SSCursor fo
r
.
.
.
commit
|
commitdiff
|
tree
2009-09-08
Christoph
e
r Le
e
added useStreaming opti
o
n to mysql_conn
e
ct()
commit
|
commitdiff
|
tree
2009-09-08
Chris
t
opher L
e
e
f
i
xed new_cur
s
or(
)
t
o
propag
a
te arraysize settin
g
properly
commit
|
commitdiff
|
tree
2009-09-05
Christoph
e
r Lee
added test for bug 8
4
commit
|
commitdiff
|
tree
2009-09-05
Christoph
e
r Lee
fixed bug 84
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
is
t
o
p
h
e
r Lee
added
t
est for Grap
h
V
i
ew keys / len
o
nly refl
e
ctin
g
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
ad
d
ed inverse suppo
r
t f
o
r GraphView
commit
|
commitdiff
|
tree
2009-09-05
Chris
t
oph
e
r Lee
added test for Gr
a
p
h
View inverse and imp
r
o
v
ed
M
apVi
e
w
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
make
GraphView
raise Key
E
rr
o
r i
f
key has no rows
i
n
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christoph
e
r Lee
added
t
es
t
s for M
a
pView iterators
an
d
len
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
avoid possible iter / key
s
infin
i
te
l
oop
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
istoph
e
r Lee
added
l
o
t
s
of t
e
sts for graphs with nodes
i
nstead
of
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
C
h
ristopher Lee
corrected the SQLGraph iterator methods a
n
d
improved
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Chri
s
topher
L
ee
testut
i
l
n
eeded new name of get_name_cursor()
commit
|
commitdiff
|
tree
2009-09-05
Christopher
Lee
m
ade g
e
t_name_c
u
rsor
(
)
u
s
e
D
B
ServerInfo
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
added i
t
eration test t
o
graph_tes
t
.
py
commit
|
commitdiff
|
tree
2009-09-05
Chri
s
topher Lee
use new iter_keys
(
) method
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
i
s
toph
e
r Lee
added better iter
method
commit
|
commitdiff
|
tree
2009-09-04
Chris
t
opher Le
e
Merge commit 'remot
e
s/
c
tb/x
m
lrpc_pa
t
ches'
commit
|
commitdiff
|
tree
2009-09-04
Christ
o
pher Lee
Merge
c
omm
i
t
'
remo
t
es/
m
ksz
u
ba/fink'
commit
|
commitdiff
|
tree
2009-09-04
Christoph
e
r L
e
e
r
e
moved tests/
o
ldtests/nlmsa_dm2_me
g
ate
s
t
.
py
commit
|
commitdiff
|
tree
2009-09-04
Chris
t
opher Lee
Merge commit
'
re
m
otes/mk
s
z
u
ba/docfixes'
commit
|
commitdiff
|
tree
2009-09-04
C
hristopher
Le
e
Merge c
o
mmit 'rem
o
tes/mksz
u
ba/cleanup'
commit
|
commitdiff
|
tree
2009-09-04
Christo
p
her Lee
Merge commit 'remotes/mkszu
b
a
/
bsd
d
b_bs
d
db3'
commit
|
commitdiff
|
tree
2009-09-04
C
h
ris
t
opher Lee
corrected
ClassicUnpickler refere
n
ce to
p
oint to classutil
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
removed unused shelv
e
import
commit
|
commitdiff
|
tree
2009-09-04
C
h
ristopher Lee
removed unused import it
e
m
commit
|
commitdiff
|
tree
2009-09-04
Christophe
r
Lee
Merge b
r
anch 'tu
t
orial'
commit
|
commitdiff
|
tree
2009-09-04
Christo
p
h
e
r
Lee
a
d
ded argum
e
nt to make MapView inverse able to
r
econstitute
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christophe
r
Lee
adde
d
test of len(
)
m
ethod for S
Q
LTa
b
le
commit
|
commitdiff
|
tree
2009-09-04
Christ
o
pher Le
e
a
d
de
d
db tutorial (m
a
pp
i
ng) back to
g
u
idel
i
st t
a
b
l
e
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christ
o
pher
L
e
e
m
apping tu
t
ori
a
l
just covers
mappings
,
s
o
remove
d
r
e
ference
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
C
h
r
ist
o
pher
Lee
added
M
apV
i
ew i
n
verse example
t
o tutorial
commit
|
commitdiff
|
tree
2009-09-04
Christopher
Le
e
added MapView
d
o
cs
commit
|
commitdiff
|
tree
2009-09-04
Christoph
e
r Lee
added test for trapping non-i
n
verti
b
le MapV
i
ew
commit
|
commitdiff
|
tree
2009-09-04
C
hri
s
t
oph
e
r Lee
added
test for __invert__
method
t
o M
a
pView
commit
|
commitdiff
|
tree
2009-09-04
Christopher Le
e
added __inve
r
t__ met
h
od to MapView
commit
|
commitdiff
|
tree
2009-09-04
Ch
r
istopher Lee
ad
d
ed material
on
S
QL MapVi
e
w
commit
|
commitdiff
|
tree
2009-09-04
Christopher Le
e
added s
e
ctions on mappi
n
g to
disk /
w
o
rldbase
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
changed title of xmlrpc tu
t
orial
commit
|
commitdiff
|
tree
2009-09-04
Christopher
L
ee
minor fixes t
o
gen
e
tutorial
commit
|
commitdiff
|
tree
2009-09-04
Christoph
e
r Lee
moved mat
e
r
i
al
o
ut of wor
l
dbase
.
rst t
o
worldbase2
.
rst
commit
|
commitdiff
|
tree
2009-09-04
Christo
p
he
r
Lee
s
e
p
arate t
u
tori
a
l o
n
s
a
v
i
n
g data to
w
orldbase
commit
|
commitdiff
|
tree
2009-09-04
Chr
i
stop
h
er Le
e
m
o
ved schema material
t
o worldbase2
.
rst tutorial
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
toph
e
r Lee
adde
d
w
o
r
ldbase
secu
r
ity warnin
g
commit
|
commitdiff
|
tree
2009-09-03
Christop
h
e
r Lee
more revisions abo
u
t downloading
t
utorial
commit
|
commitdiff
|
tree
2009-09-03
Chris
t
opher Le
e
revisions
to download=Tr
u
e
s
ect
i
o
n
commit
|
commitdiff
|
tree
2009-09-03
Christoph
e
r
Lee
ad
d
e
d
dep
e
ndency
s
e
c
tion
i
n wor
l
dbase
.
rst tutorial
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher
L
ee
added worldbas
e
.
d
i
r
() tutorial
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher Lee
added intro section to worldb
a
se
.
r
s
t tutorial
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
stopher L
e
e
added Purpose to alignment
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Christo
p
her Lee
mo
r
e lit
t
le changes to ann
o
tation2
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Chris
t
opher Lee
added Purpose and in
t
ro
t
o annotations2
.
rst
commit
|
commitdiff
|
tree
2009-09-03
C
hrist
o
p
her Lee
moved new basic tuto
r
ials to
t
op of guide list
commit
|
commitdiff
|
tree
2009-09-03
Christo
p
her Lee
mi
n
or
f
ix
t
o db
_
basic
.
rst
commit
|
commitdiff
|
tree
2009-09-03
C
h
ristopher Lee
u
pdates
to referenc
e
/sqlgraph
.
r
s
t
d
oc
s
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
stopher Lee
ad
d
ed SQL saving s
e
c
tion to db tutorial
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher
Lee
b
asi
c
database
t
utorial
commit
|
commitdiff
|
tree
2009-09-03
Christopher Lee
added back __
l
en__() to
S
Q
LTa
b
leBa
s
e
.
How in h
e
c
k
.
.
.
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
s
t
o
phe
r
Le
e
added
s
e
c
tion
o
n PrefixUnionDict
commit
|
commitdiff
|
tree
2009-09-02
Ch
r
istopher Le
e
ad
d
ed se
c
tion
o
n plugging in you
r
own
s
e
quen
c
e parser
commit
|
commitdiff
|
tree
2009-09-02
Chr
i
s
topher Lee
m
o
ved old ma
t
erial o
u
t
t
o compgenomics
.
rst
commit
|
commitdiff
|
tree
2009-09-02
C
hristopher Le
e
som
e
minor seq
u
ence tutorial revisions
commit
|
commitdiff
|
tree
2009-09-02
Christo
p
her Lee
added
t
utorial section on accessing sequenc
e
database
.
.
.
commit
|
commitdiff
|
tree
2009-09-02
Christopher Lee
s
plit up bullet points to
i
nteg
r
a
t
e
into the cod
e
example
commit
|
commitdiff
|
tree
2009-09-02
Christop
h
e
r L
e
e
r
e
v
i
sed se
q
u
e
nce tutorial
i
n
t
r
o
(first part)
commit
|
commitdiff
|
tree
2009-09-02
Chri
s
top
h
er Lee
M
erge commi
t
'r
e
motes/ctb/xm
l
rpc_tut
o
ri
a
l' into
tutorial
commit
|
commitdiff
|
tree
2009-09-02
Chri
s
t
op
h
er Le
e
Merg
e
commit
'
remotes/ctb
/
doc_alignm
e
nt' int
o
tu
t
oria
l
commit
|
commitdiff
|
tree
2009-09-02
Christopher Lee
revised gff3 code
commit
|
commitdiff
|
tree
2009-09-02
Christoph
e
r Le
e
added
G
FF
3
example of ge
n
e
buil
d
ing
commit
|
commitdiff
|
tree
2009-09-01
Chris
t
opher Lee
Merg
e
c
o
m
m
i
t
'remotes/mkszuba/xmlrpc_tutorial'
i
n
t
o
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
Christopher Lee
Merge comm
i
t 'remotes/ct
b
/doc
_
annotations' i
n
to tutorial
commit
|
commitdiff
|
tree
2009-09-01
C
h
r
istopher Lee
extracted mat
e
rial
f
or separ
a
te
d
atabase tutorial
commit
|
commitdiff
|
tree
2009-08-29
Christ
o
ph
e
r Lee
removed un
n
ece
s
sary stat and shutil import from
s
etup
.
p
y
commit
|
commitdiff
|
tree
2009-08-14
Christop
h
er Lee
fixed easy_install bug
by protectin
g
coord
i
nator
.
ResourceFil
.
.
.
commit
|
commitdiff
|
tree
2009-08-04
Christopher
L
ee
fix
e
d blast
_
t
e
s
t: ren
a
med
t
est_seq_without_db() to
.
.
.
commit
|
commitdiff
|
tree
2009-08-04
Chr
i
stopher
L
ee
M
erge comm
i
t 'remotes/ctb/minor_
f
ixes'
in
t
o minor_fixes
commit
|
commitdiff
|
tree
2009-08-04
Christopher Lee
fix port
passing in tes
t
util
.
TestXMLRPC
S
erv
e
r
commit
|
commitdiff
|
tree
2009-08-04
Christopher
L
e
e
use pair_identity_tuple() for bl
a
st_test formatti
n
g
.
.
.
commit
|
commitdiff
|
tree
2009-08-04
Christoph
e
r Lee
added BlastBase
.
t
earDown() to
close seqd
b
s as t
h
e
y
.
.
.
commit
|
commitdiff
|
tree
2009-08-04
Christopher Lee
Merge commit 'r
e
motes/mkszub
a
/d
o
c_make'
commit
|
commitdiff
|
tree
2009-08-04
Christ
o
p
her Le
e
Merge commit
'
r
e
mo
t
es/mkszuba
/
rpm'
commit
|
commitdiff
|
tree
2009-07-29
Christ
o
p
h
er
L
ee
got rid of
B
lastMa
p
ping
.
warn_about_self_ma
t
che
s
(
)
commit
|
commitdiff
|
tree
2009-07-29
C
hristophe
r
L
e
e
changed
NLMSA pairwiseMode to allow reporting of self
.
.
.
commit
|
commitdiff
|
tree
2009-07-29
Christophe
r
L
e
e
M
erg
e
commit 'r
e
m
o
tes
/
mkszuba/debian'
commit
|
commitdiff
|
tree
2009-07-29
Christopher Lee
retr
y
r
e
ading port_file
i
n
Te
s
tXMLR
P
CServer several
.
.
.
commit
|
commitdiff
|
tree
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