repo.or.cz
/
pygr.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
made SQLTableClustered use standard iterator methods, orderBy. Added tests.
2009-09-10
Christop
h
er Lee
m
ade SQLTa
b
le
C
lust
e
r
ed use s
t
andard iterator metho
d
s
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
C
h
ristopher Lee
c
hange
d
BlockGen
e
rator to sel
e
ct multiple column
s
a
t
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Chr
i
stopher Lee
added s
u
pp
o
rt for new itera
t
ion approach to SQLTableMul
t
iNoCache
commit
|
commitdiff
|
tree
2009-09-10
Ch
r
istopher Lee
Merge commit 're
m
otes/
c
tb/tutorial' int
o
t
r
yme
commit
|
commitdiff
|
tree
2009-09-10
Christopher Lee
Merge c
o
mmit 'remotes/ctb
/
x
m
lrpc_pa
t
c
h
es' into tr
y
me
commit
|
commitdiff
|
tree
2009-09-10
Christopher
Lee
added order-b
y
pi
c
kli
n
g test
commit
|
commitdiff
|
tree
2009-09-10
Christopher
L
ee
added
SQLTable pickle test
commit
|
commitdiff
|
tree
2009-09-10
Christopher Lee
add
e
d tests w/o serverSideCurso
r
s
o
r
blo
c
kIterators
commit
|
commitdiff
|
tree
2009-09-10
C
h
ri
s
topher
Le
e
added se
r
ver
S
ideCursor
s
and blockIterator
s
options
commit
|
commitdiff
|
tree
2009-09-10
Chr
i
stopher Lee
expanded random value
o
rder by test
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
Merg
e
commit 'remotes/m
k
sz
u
b
a
/sqltable_o
r
de
r
b
y
' into
.
.
.
commit
|
commitdiff
|
tree
2009-09-09
Chr
i
s
t
opher Lee
adde
d
SQLTable_Test
.
t
est_o
r
derBy
(
)
commit
|
commitdiff
|
tree
2009-09-09
Chri
s
topher
Lee
up
d
ate
d
B
l
ockGenerato
r
t
o
w
ork with gen
e
ral
i
z
e
d orderBy
.
.
.
commit
|
commitdiff
|
tree
2009-09-09
Chr
i
stop
h
er Lee
generalize BlockGenerator to wo
r
k
w
ith string keys
commit
|
commitdiff
|
tree
2009-09-09
Ch
r
istopher Lee
fixed
s
ma
l
l
syntax
er
r
or
commit
|
commitdiff
|
tree
2009-09-09
Chri
s
tophe
r
Le
e
a
d
de
d
CursorCloser
(
) mechanism
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
BlockG
e
nerator now working
commit
|
commitdiff
|
tree
2009-09-09
Chri
s
to
p
her Lee
f
ixes to
p
reven
t
unnecessa
r
y inv
o
c
ation
o
f cmp()
commit
|
commitdiff
|
tree
2009-09-09
Chri
s
top
h
er L
e
e
fi
x
es to prevent un
n
ecessary invocation
of iter()
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
mor
e
test
s
f
o
r unwan
t
ed i
t
er
a
tion
commit
|
commitdiff
|
tree
2009-09-09
Christoph
e
r
Lee
b
a
s
ic
call for bl
o
ck generator bas
e
d
i
t
er
commit
|
commitdiff
|
tree
2009-09-09
Christopher Le
e
added test for
un
w
anted ite
r
a
tion
commit
|
commitdiff
|
tree
2009-09-09
Ch
r
i
s
t
o
pher Lee
first implemen
t
ation
of BlockGenerato
r
i
te
r
ation mechani
s
m
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
make iterval
u
es / iteritems use same orderBy r
u
les
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
generaliz
e
d
i
t
er_key
s
(), added orderBy su
p
port
commit
|
commitdiff
|
tree
2009-09-08
C
h
r
istopher Lee
creat
e
d MySQLServerInfo class tha
t
uses SSCurso
r
f
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-09-08
Christopher L
e
e
added useStr
e
aming option to mysql_connect()
commit
|
commitdiff
|
tree
2009-09-08
C
h
ristoph
e
r Lee
fixed new_cur
s
or(
)
to propagate arraysize setti
n
g
properly
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
i
s
topher Lee
adde
d
test for bug 84
commit
|
commitdiff
|
tree
2009-09-05
Chr
i
stoph
e
r Le
e
fixe
d
bug 84
commit
|
commitdiff
|
tree
2009-09-05
Christopher
Lee
ad
d
ed t
e
st for G
r
aphV
i
e
w
keys / len only reflecting
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
added inverse support for GraphView
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
istopher Lee
added
test for
Gra
p
hView in
v
erse and improved MapView
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Chris
t
opher Lee
m
a
ke GraphView raise KeyError
i
f key has
no
r
ows in
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Chri
s
toph
e
r
L
ee
add
e
d
tests
f
o
r
MapView
i
terators and l
e
n
commit
|
commitdiff
|
tree
2009-09-05
Chr
i
s
t
o
ph
e
r Lee
avoi
d
p
o
ss
i
b
l
e it
e
r / k
e
ys
i
n
f
inite loop
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
added lots
of tests fo
r
graphs with
n
odes in
s
tead o
f
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
C
h
ristopher Lee
correct
e
d the SQLG
r
aph iterator methods and improve
d
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Chris
t
oph
e
r L
e
e
tes
t
ut
i
l needed new name of ge
t
_n
a
me_
c
ursor(
)
commit
|
commitdiff
|
tree
2009-09-05
Christopher L
e
e
made get
_
n
a
me_curs
o
r(
)
use DBSer
v
er
I
nfo
commit
|
commitdiff
|
tree
2009-09-05
Christopher Le
e
added ite
r
ati
o
n test to gr
a
p
h
_
test
.
py
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
u
s
e new ite
r
_keys() method
commit
|
commitdiff
|
tree
2009-09-05
Christ
o
p
her Lee
a
dded
b
etter
iter m
e
thod
commit
|
commitdiff
|
tree
2009-09-04
C
hri
s
topher Lee
M
e
rge
commit
'remotes/
c
tb/x
m
lrpc_patches'
commit
|
commitdiff
|
tree
2009-09-04
C
hris
t
opher Lee
Merge commit 'rem
o
tes/
m
kszub
a
/f
i
n
k'
commit
|
commitdiff
|
tree
2009-09-04
C
hrist
o
pher Lee
remove
d
tes
t
s/oldtests/nlms
a
_dm
2
_megatest
.
py
commit
|
commitdiff
|
tree
2009-09-04
C
h
ris
t
opher
L
ee
Merge
c
ommit 'remot
e
s/mkszuba/
d
ocfixes'
commit
|
commitdiff
|
tree
2009-09-04
Ch
r
istopher Lee
Me
r
g
e
commit 'remotes/m
k
szuba/cleanup'
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
Merge commit 'rem
o
te
s
/mkszuba/bsddb
_
bsddb3'
commit
|
commitdiff
|
tree
2009-09-04
Christop
h
er
Lee
cor
r
ect
e
d
C
lassicUnpickl
e
r
refe
r
en
c
e to point to classutil
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
C
hristopher
L
ee
removed unused shelve i
m
po
r
t
commit
|
commitdiff
|
tree
2009-09-04
Chr
i
stopher Lee
removed unused import item
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
Merge branch '
t
utorial'
commit
|
commitdiff
|
tree
2009-09-04
Chris
t
opher Lee
added argument
to make MapView inverse able to re
c
o
n
stit
u
t
e
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christo
p
her L
e
e
a
d
ded test
o
f l
e
n
() me
t
h
o
d f
o
r
SQLTab
l
e
commit
|
commitdiff
|
tree
2009-09-04
Christoph
e
r
Lee
a
dded db
tuto
r
ial
(mapping) back to
g
u
idelist table
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
mapp
i
ng tutoria
l
just co
v
ers
m
app
i
n
g
s, so removed
refer
e
nc
e
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
C
h
ristophe
r
Lee
ad
d
ed MapVi
e
w
i
nverse examp
l
e to tutor
i
al
commit
|
commitdiff
|
tree
2009-09-04
Christophe
r
Lee
add
e
d
M
apView docs
commit
|
commitdiff
|
tree
2009-09-04
Chr
i
s
topher Lee
ad
d
ed t
e
st fo
r
tr
a
pping non-invertible MapView
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
added
test for __i
n
v
e
rt__ metho
d
t
o MapView
commit
|
commitdiff
|
tree
2009-09-04
C
hristopher
Le
e
added __invert
_
_
m
e
thod to MapVie
w
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
added m
a
teri
a
l on SQL MapView
commit
|
commitdiff
|
tree
2009-09-04
Christ
o
phe
r
Lee
added
s
ectio
n
s o
n
m
a
pp
i
ng t
o
d
i
sk / worldbase
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
changed title of xmlr
p
c
tutorial
commit
|
commitdiff
|
tree
2009-09-04
Christop
h
er L
e
e
min
o
r f
i
xes to
g
en
e
tu
t
orial
commit
|
commitdiff
|
tree
2009-09-04
Chr
i
stopher Lee
moved m
a
terial
o
ut of worl
d
ba
s
e
.
rst to worldbase2
.
rst
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
separate
t
u
tor
i
al on saving data t
o
worldb
a
s
e
commit
|
commitdiff
|
tree
2009-09-04
Chri
s
to
p
her
Le
e
moved s
c
hema material to worldbase2
.
rst tutorial
commit
|
commitdiff
|
tree
2009-09-03
Christophe
r
Lee
added wor
l
dbase se
c
urit
y
war
n
ing
commit
|
commitdiff
|
tree
2009-09-03
Christopher Lee
m
o
re
r
evisi
o
n
s about do
w
n
l
oading tu
t
orial
commit
|
commitdiff
|
tree
2009-09-03
C
hristo
p
h
e
r Lee
revisions to downlo
a
d=True section
commit
|
commitdiff
|
tree
2009-09-03
C
h
ri
s
t
o
p
he
r
Lee
adde
d
dependency
section in worldbase
.
rst tutorial
commit
|
commitdiff
|
tree
2009-09-03
Christopher L
e
e
added
worl
d
base
.
d
ir(
)
tutorial
commit
|
commitdiff
|
tree
2009-09-03
Christoph
e
r Lee
added intro s
e
ction
t
o
worldbase
.
rst tutori
a
l
commit
|
commitdiff
|
tree
2009-09-03
Chris
t
opher Lee
a
dded Pu
r
pos
e
to alig
n
m
ent
.
r
s
t
commit
|
commitdiff
|
tree
2009-09-03
Ch
r
istopher Lee
mor
e
lit
t
le changes t
o
annota
t
ion2
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher L
e
e
added Purpose and intr
o
to annotat
i
ons2
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Christ
o
phe
r
Lee
moved new
b
asic tutorials to to
p
of
g
u
ide lis
t
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
sto
p
her Lee
mi
n
or fix to db
_
b
asic
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Christopher Le
e
u
pdates to reference/sqlgraph
.
r
st d
o
cs
commit
|
commitdiff
|
tree
2009-09-03
Christopher Lee
a
dded SQL savi
n
g section
to db tutor
i
al
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
st
o
pher
L
e
e
basi
c
d
atabase tutor
i
al
commit
|
commitdiff
|
tree
2009-09-03
Christo
p
h
er
L
ee
a
d
ded back __le
n
__() to SQLTable
B
ase
.
How
i
n
h
eck
.
.
.
commit
|
commitdiff
|
tree
2009-09-03
Ch
r
istopher Lee
a
d
d
ed section on PrefixUnionDict
commit
|
commitdiff
|
tree
2009-09-02
Christ
o
p
h
er
Lee
added s
e
ction
on plug
g
ing in
y
o
u
r
own seque
n
ce parse
r
commit
|
commitdiff
|
tree
2009-09-02
Christopher Lee
moved
o
ld material out to compgenomic
s
.
r
st
commit
|
commitdiff
|
tree
2009-09-02
C
hristopher Lee
som
e
min
o
r
sequence
t
utorial r
e
visions
commit
|
commitdiff
|
tree
2009-09-02
Christophe
r
Lee
added tutor
i
al section on accessin
g
sequence database
.
.
.
commit
|
commitdiff
|
tree
2009-09-02
Christop
h
er Lee
split up b
u
llet points to integrate in
t
o the c
o
de exampl
e
commit
|
commitdiff
|
tree
2009-09-02
Christop
h
er Lee
revised sequence tut
o
rial i
n
t
r
o
(first part)
commit
|
commitdiff
|
tree
2009-09-02
Chr
i
stoph
e
r
L
ee
Merge commit
'
rem
o
tes/ctb
/
xmlrpc_tutorial' into
t
uto
r
ial
commit
|
commitdiff
|
tree
2009-09-02
Christopher Lee
Merge commit
'
remotes/
c
tb/doc_alignment'
into
tu
t
orial
commit
|
commitdiff
|
tree
2009-09-02
C
hristopher L
e
e
revi
s
ed g
f
f3 code
commit
|
commitdiff
|
tree
2009-09-02
Christopher
L
ee
added GFF
3
example of gene
build
i
ng
commit
|
commitdiff
|
tree
2009-09-01
Christopher Lee
Merge co
m
mit '
r
emotes/mk
s
zuba/xmlrpc_tu
t
orial' int
o
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
Ch
r
istopher
L
ee
M
e
rge c
o
m
m
it 'remotes
/
ctb/doc_annotations' into tutorial
commit
|
commitdiff
|
tree
2009-09-01
C
h
ristoph
e
r Lee
extracted m
a
terial for separate
d
atabase tut
o
rial
commit
|
commitdiff
|
tree
2009-08-29
Christop
h
er Lee
rem
o
ved
unnecessary stat
a
nd shuti
l
imp
o
rt from se
t
up
.
py
commit
|
commitdiff
|
tree
2009-08-14
Ch
r
istopher Lee
fixed easy_ins
t
al
l
bug by pro
t
ec
t
i
n
g coordinator
.
Re
s
our
c
eFil
.
.
.
commit
|
commitdiff
|
tree
next