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Merge commit 'remotes/ctb/tutorial' into tryme
2009-09-10
C
h
ristopher Le
e
Merge c
o
mmit 'remotes/ctb/tutor
i
al' i
n
to tryme
commit
|
commitdiff
|
tree
2009-09-10
Christopher Lee
Merge commi
t
'remotes/ctb/xmlr
p
c_pa
t
c
h
es' i
n
to tryme
commit
|
commitdiff
|
tree
2009-09-10
Christo
p
her Lee
added
order-by picklin
g
test
commit
|
commitdiff
|
tree
2009-09-10
Ch
r
isto
p
her Lee
added
S
Q
LTable pickle t
e
st
commit
|
commitdiff
|
tree
2009-09-10
C
hristoph
e
r
L
ee
ad
d
ed t
e
sts w/o serverSideCursors or
b
lockIterato
r
s
commit
|
commitdiff
|
tree
2009-09-10
Christopher Lee
add
e
d serve
r
Si
d
eCursors and blockIterators o
p
tions
commit
|
commitdiff
|
tree
2009-09-10
Christoph
e
r Le
e
expa
n
ded
r
andom value o
r
d
er by test
commit
|
commitdiff
|
tree
2009-09-09
Christophe
r
Lee
Merge commit 'remotes/mkszuba/sqltable
_
orderby' i
n
to
.
.
.
commit
|
commitdiff
|
tree
2009-09-09
Christopher Le
e
added SQ
L
Table_Test
.
t
e
st_orderBy(
)
commit
|
commitdiff
|
tree
2009-09-09
C
h
r
i
stoph
e
r
L
ee
update
d
Blo
c
kGenerator to work with generalized order
B
y
.
.
.
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
generalize BlockGenerator to work with s
t
ring keys
commit
|
commitdiff
|
tree
2009-09-09
C
hristop
h
er Lee
fixed small syntax error
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
adde
d
CursorClos
e
r() mechan
i
s
m
commit
|
commitdiff
|
tree
2009-09-09
Christopher Lee
Block
G
en
e
rator now working
commit
|
commitdiff
|
tree
2009-09-09
Ch
r
i
s
topher Lee
fixes to prevent unnecessa
r
y
invocation
of cmp()
commit
|
commitdiff
|
tree
2009-09-09
Christopher
L
ee
fixes
t
o preven
t
unnecessary
inv
o
cation of it
e
r
()
commit
|
commitdiff
|
tree
2009-09-09
Chris
t
ophe
r
L
ee
more tests for u
n
wanted iteration
commit
|
commitdiff
|
tree
2009-09-09
Christop
h
er Lee
basic
cal
l
fo
r
b
l
ock
gener
a
tor bas
e
d ite
r
commit
|
commitdiff
|
tree
2009-09-09
Christopher
L
ee
a
dded te
s
t for unwanted itera
t
ion
commit
|
commitdiff
|
tree
2009-09-09
Christ
o
pher Lee
f
irst implementatio
n
of Bloc
k
G
enerator ite
r
ati
o
n me
c
hanism
commit
|
commitdiff
|
tree
2009-09-09
Chr
i
s
topher Le
e
make itervalue
s
/ ite
r
items use same
order
B
y rules
commit
|
commitdiff
|
tree
2009-09-09
Christophe
r
Lee
gen
e
ralized ite
r
_k
e
ys(
)
,
ad
d
ed or
d
erBy suppo
r
t
commit
|
commitdiff
|
tree
2009-09-08
Chri
s
topher Lee
c
r
eated MySQLServer
I
nfo class th
a
t
u
ses
S
SCu
r
sor
for
.
.
.
commit
|
commitdiff
|
tree
2009-09-08
Christopher Le
e
a
dded useS
t
reaming op
t
i
o
n
to
mysql_connect()
commit
|
commitdiff
|
tree
2009-09-08
Chris
t
opher
L
e
e
fixed ne
w
_cu
r
s
o
r() to propagate
a
rraysize setting properly
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
istopher
L
ee
added te
s
t f
o
r bug
84
commit
|
commitdiff
|
tree
2009-09-05
Christopher L
e
e
fix
e
d bug 8
4
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
ist
o
pher L
e
e
adde
d
test for GraphV
i
ew
k
eys / len only refl
e
cting
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christopher
L
ee
added inverse s
u
pport
f
or
GraphVie
w
commit
|
commitdiff
|
tree
2009-09-05
Chr
i
s
t
opher
Lee
added test
f
o
r
GraphView inverse
a
nd improved MapView
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christ
o
pher Lee
ma
k
e GraphView raise KeyEr
r
o
r
if key has
no rows in
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christ
o
phe
r
Lee
added tests for M
a
p
V
iew iterato
r
s and l
e
n
commit
|
commitdiff
|
tree
2009-09-05
C
h
r
istophe
r
Le
e
avoid p
o
ssible ite
r
/
k
ey
s
infi
n
i
te loop
commit
|
commitdiff
|
tree
2009-09-05
Christopher Lee
added
l
o
ts
of te
s
ts for graphs with nod
e
s
i
nstead
of
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Christoph
e
r Lee
c
o
rrected the S
Q
LGraph iterator meth
o
d
s and
impr
o
ved
.
.
.
commit
|
commitdiff
|
tree
2009-09-05
Chris
t
opher Lee
testut
i
l needed
new n
a
me o
f
get_name_curso
r
()
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
i
s
top
h
er
L
e
e
ma
d
e g
e
t
_
name_curs
o
r() use DBServerInfo
commit
|
commitdiff
|
tree
2009-09-05
C
hristo
p
her Lee
ad
d
ed itera
t
ion
t
e
s
t to graph_test
.
py
commit
|
commitdiff
|
tree
2009-09-05
Ch
r
istopher Lee
us
e
new it
e
r
_
k
e
y
s
() me
t
ho
d
commit
|
commitdiff
|
tree
2009-09-05
Chri
s
top
h
er L
e
e
a
d
d
e
d bet
t
e
r iter method
commit
|
commitdiff
|
tree
2009-09-04
Christo
p
her
L
ee
Merge commit 'rem
o
t
es/ctb/xmlrpc_patches'
commit
|
commitdiff
|
tree
2009-09-04
C
h
rist
o
pher Lee
Merge
co
m
mit 'remote
s
/mkszuba/fi
n
k'
commit
|
commitdiff
|
tree
2009-09-04
Christophe
r
Lee
removed
t
ests/oldtests/nlmsa_dm2_megatest
.
py
commit
|
commitdiff
|
tree
2009-09-04
Christop
h
er Lee
Merge commit '
r
e
m
o
tes/mkszuba/d
o
cfixes'
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
Merge com
m
it '
r
em
o
t
e
s/mkszuba
/
cle
a
n
up'
commit
|
commitdiff
|
tree
2009-09-04
Christo
p
h
e
r
Lee
Merge c
o
mmit 'remot
e
s
/
mkszuba/bsddb
_
b
s
d
db3'
commit
|
commitdiff
|
tree
2009-09-04
C
h
ristopher Lee
c
orrec
t
ed ClassicUnpickler
refer
e
nce to point to classuti
l
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Chr
i
s
t
ophe
r
Lee
removed unused shelve import
commit
|
commitdiff
|
tree
2009-09-04
C
hr
i
stopher
L
ee
r
e
mo
v
ed unus
e
d impor
t
item
commit
|
commitdiff
|
tree
2009-09-04
Chris
t
opher Lee
Merge br
a
nch 'tutorial'
commit
|
commitdiff
|
tree
2009-09-04
Christop
h
er Lee
adde
d
argum
e
nt t
o
m
a
ke M
a
pVie
w
inverse a
b
le to
reconst
i
tute
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christopher Le
e
added
t
es
t
o
f
len()
met
h
od f
o
r
SQLTable
commit
|
commitdiff
|
tree
2009-09-04
C
h
ristopher
L
ee
a
d
ded d
b
tut
o
rial (mapping) b
a
ck to guidelis
t
table
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Christophe
r
Lee
mapp
i
ng tutoria
l
just covers
m
appin
g
s, so removed
r
e
f
e
r
ence
.
.
.
commit
|
commitdiff
|
tree
2009-09-04
Chris
t
opher Le
e
a
d
ded MapView inv
e
rse example
t
o tutor
i
al
commit
|
commitdiff
|
tree
2009-09-04
C
hris
t
o
pher Lee
added Map
V
iew docs
commit
|
commitdiff
|
tree
2009-09-04
C
hristoph
e
r
Lee
adde
d
test
f
or trapping no
n
-inve
r
tible MapView
commit
|
commitdiff
|
tree
2009-09-04
Chri
s
t
o
pher
Lee
added test for __invert__ me
t
ho
d
to
M
apView
commit
|
commitdiff
|
tree
2009-09-04
Christopher Lee
a
d
ded __invert
_
_
method t
o
Map
V
iew
commit
|
commitdiff
|
tree
2009-09-04
Chr
i
s
topher L
e
e
added ma
t
erial on SQL MapVi
e
w
commit
|
commitdiff
|
tree
2009-09-04
Christop
h
er Le
e
a
d
ded
sections on mapping to disk / worldbase
commit
|
commitdiff
|
tree
2009-09-04
Ch
r
isto
p
h
er Lee
c
h
anged title o
f
xmlrpc tutor
i
al
commit
|
commitdiff
|
tree
2009-09-04
Christophe
r
Lee
minor
f
i
x
e
s to gene tutor
i
al
commit
|
commitdiff
|
tree
2009-09-04
C
h
rist
o
pher Lee
m
oved material out o
f
wor
l
dbase
.
rst
t
o worldbase2
.
r
s
t
commit
|
commitdiff
|
tree
2009-09-04
Christ
o
pher Lee
separate tutorial
on saving data
t
o worldbase
commit
|
commitdiff
|
tree
2009-09-04
Ch
r
istoph
e
r Lee
moved sche
m
a materi
a
l to worldbase2
.
rst t
u
tori
a
l
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher Lee
added world
b
ase security warning
commit
|
commitdiff
|
tree
2009-09-03
Christopher Lee
m
o
re rev
i
s
ions about
downloading tutorial
commit
|
commitdiff
|
tree
2009-09-03
C
h
ristop
h
e
r Le
e
re
v
isions to
down
l
oad=Tr
u
e sectio
n
commit
|
commitdiff
|
tree
2009-09-03
Ch
r
istopher Lee
a
dded depend
e
ncy se
c
ti
o
n in worldbase
.
rst tutorial
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
toph
e
r Lee
a
d
ded wo
r
ldbase
.
dir
(
)
tutori
a
l
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
stopher Lee
a
d
ded intro
sectio
n
to world
b
ase
.
rs
t
tu
t
orial
commit
|
commitdiff
|
tree
2009-09-03
Ch
r
istopher Lee
added Purpose to alignment
.
r
s
t
commit
|
commitdiff
|
tree
2009-09-03
C
hristophe
r
Lee
more little cha
n
g
e
s
to an
n
otation2
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher Lee
added Purpose and intr
o
t
o
annotations2
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
topher L
e
e
mo
v
ed new basic
tutorials
t
o top of guide l
i
st
commit
|
commitdiff
|
tree
2009-09-03
Christopher L
e
e
minor
f
ix
t
o db_basic
.
rst
commit
|
commitdiff
|
tree
2009-09-03
Chr
i
stopher Lee
updates to reference/sqlgra
p
h
.
rst docs
commit
|
commitdiff
|
tree
2009-09-03
Christopher Lee
added SQL savi
n
g sec
t
io
n
t
o
d
b tutorial
commit
|
commitdiff
|
tree
2009-09-03
Ch
r
ist
o
phe
r
Lee
b
a
sic datab
a
se tutori
a
l
commit
|
commitdiff
|
tree
2009-09-03
Ch
r
isto
p
her Lee
added back _
_
len__
(
) to SQLTabl
e
Base
.
How in heck
.
.
.
commit
|
commitdiff
|
tree
2009-09-03
Chri
s
t
o
pher Lee
added sec
t
i
o
n o
n
Pre
f
ix
U
nionDict
commit
|
commitdiff
|
tree
2009-09-02
C
hrist
o
pher
L
ee
added
sec
t
ion o
n
p
l
ugging
i
n yo
u
r own sequenc
e
parser
commit
|
commitdiff
|
tree
2009-09-02
C
hristopher Lee
mo
v
ed old material
o
u
t to co
m
pgenomi
c
s
.
rst
commit
|
commitdiff
|
tree
2009-09-02
Christopher
L
ee
s
ome m
i
nor
sequen
c
e tutorial
re
v
isi
o
ns
commit
|
commitdiff
|
tree
2009-09-02
Christoph
e
r
L
ee
added tutor
i
al section
on a
c
c
e
ssi
n
g sequence d
a
tabase
.
.
.
commit
|
commitdiff
|
tree
2009-09-02
Christopher Lee
sp
l
it up
b
ulle
t
points to integrat
e
i
nto
the
code examp
l
e
commit
|
commitdiff
|
tree
2009-09-02
Christopher
L
e
e
revised sequence tutorial intro (first part)
commit
|
commitdiff
|
tree
2009-09-02
C
h
r
i
st
o
pher L
e
e
Merge co
m
mit 'remotes/ct
b
/xmlrpc_tutorial' in
t
o tutorial
commit
|
commitdiff
|
tree
2009-09-02
C
h
ristopher
Lee
M
e
rg
e
commit 'remotes/ctb/do
c
_a
l
i
g
nment' into
t
utorial
commit
|
commitdiff
|
tree
2009-09-02
Ch
r
istopher Lee
revised gff
3
co
d
e
commit
|
commitdiff
|
tree
2009-09-02
Christ
o
pher Lee
add
e
d
G
FF3 exam
p
le of gene building
commit
|
commitdiff
|
tree
2009-09-01
Chris
t
opher
L
ee
Mer
g
e commit 'remotes/mkszuba/xmlrpc
_
tutorial' into
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
Chri
s
to
p
her
L
ee
Merge commit
'remotes/ctb/doc
_
annotations'
i
nto tutor
i
al
commit
|
commitdiff
|
tree
2009-09-01
Christop
h
er Le
e
ex
t
r
acted mater
i
al for separate databas
e
t
utorial
commit
|
commitdiff
|
tree
2009-08-29
Christopher Lee
removed u
n
n
e
ces
s
ary stat a
n
d shutil import from setup
.
py
commit
|
commitdiff
|
tree
2009-08-14
Chris
t
o
p
her Lee
fi
x
ed easy_instal
l
b
u
g by prot
e
c
tin
g
coordinator
.
ResourceFil
.
.
.
commit
|
commitdiff
|
tree
2009-08-04
C
hris
t
opher L
e
e
fixed b
l
ast_test: renamed test_se
q
_
w
ithout_db
(
) to
.
.
.
commit
|
commitdiff
|
tree
2009-08-04
Christop
h
er
Lee
Me
r
g
e
commit 're
m
otes/ctb/minor_fixes' i
n
to mi
n
o
r_fixes
commit
|
commitdiff
|
tree
2009-08-04
Christopher Lee
fix port passing in
te
s
tutil
.
T
estXML
R
PC
S
er
v
er
commit
|
commitdiff
|
tree
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