| 2010-12-01 |
Naama Menda | patch for updating the unique constraint on nd_experiment_ph...
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| 2010-11-24 |
Naama Menda | updating chromosome number for loci with itag matches
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| 2010-11-24 |
Naama Menda | fixed typos in db patch
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| 2010-11-24 |
Naama Menda | setting itag synonym preferred=f
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| 2010-11-24 |
Naama Menda | loading script for ITAG2 - loci matches
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| 2010-11-24 |
Naama Menda | got rid of more last_insert_id calling
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| 2010-11-24 |
Naama Menda | getting rid of silly last_insert_id
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| 2010-11-05 |
Naama Menda | another fix for query returning database id
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| 2010-11-05 |
Naama Menda | fixed insert queries to return the database id, since...
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| 2010-11-05 |
Naama Menda | fixed a bug in getting database id after an insert
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| 2010-11-03 |
Naama Menda | updated version for BCS required for Phenome
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| 2010-11-01 |
Naama Menda | replaced find with create_with for accession cvterm
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| 2010-10-29 |
Naama Menda | added stock_dbxrefprop table to db patch.
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| 2010-10-29 |
Naama Menda | forgot to use Try::Tiny
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| 2010-10-29 |
Naama Menda | typo
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| 2010-10-29 |
Naama Menda | fixed population update function.
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| 2010-10-28 |
Naama Menda | db patches should work right now, with loading stock_id...
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| 2010-10-28 |
Naama Menda | forgeot to get rid of STDERR printing
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| 2010-10-28 |
Naama Menda | added db_pathces required to Build.PL
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| 2010-10-28 |
Naama Menda | applies changes to ND schema
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| 2010-10-28 |
Naama Menda | db patch moved from sgn/topic/solcap_marker
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| 2010-10-28 |
Naama Menda | solcap TA loading script also needs to store 1 experiment...
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| 2010-10-28 |
Naama Menda | added genotype experiments ,and linking the stock ...
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| 2010-10-28 |
Naama Menda | added accessors for stock_id . Need to run AddStockLInks...
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| 2010-10-28 |
Naama Menda | added function for finding genotype regions per genotype
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| 2010-10-28 |
Naama Menda | db patch for adding stock_id rows to individual, phenotype...
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| 2010-10-28 |
Naama Menda | db patch for adding a stock_id field for tables about...
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| 2010-10-28 |
Naama Menda | removed emacs backup file
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| 2010-10-26 |
Naama Menda | solcap loading script should load one experiment per run
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commit | commitdiff | tree |
| 2010-10-26 |
Naama Menda | solcap data should load with one nd_experiment per run
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| 2010-10-26 |
Naama Menda | added txn_rollback when 'try' fails. Doesn't see to...
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| 2010-10-26 |
Naama Menda | added the allele_phenotype field to the locus/allele...
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| 2010-10-26 |
Naama Menda | found a bug with storing phenotypes. Need to update...
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| 2010-10-25 |
Naama Menda | fixed db patch for phenome data migration into chado...
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| 2010-10-23 |
Naama Menda | patch for migrating phenome individual and population...
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| 2010-10-23 |
Naama Menda | got rid of dbh checking in constructor
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| 2010-10-23 |
Naama Menda | fixed POD
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| 2010-10-23 |
Naama Menda | got rid of checking dbh in constructor, and added a...
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| 2010-10-23 |
Naama Menda | cv_name for sgn_person_id should be local
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| 2010-10-23 |
Naama Menda | changed cv_name for sgn image ids to local
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| 2010-10-20 |
Naama Menda | person_id should be a local prop and not stockprop
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| 2010-10-20 |
Naama Menda | added more verbose user output in solcap phenonotyping...
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| 2010-10-19 |
Naama Menda | rename plots loading script to a more generic name...
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commit | commitdiff | tree |
| 2010-10-15 |
Naama Menda | fixed option passed to get)_unigenes function
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commit | commitdiff | tree |
| 2010-10-12 |
Naama Menda | fixed options in image loading script
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commit | commitdiff | tree |
| 2010-10-12 |
Naama Menda | loading script for solcap images
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commit | commitdiff | tree |
| 2010-10-05 |
Naama Menda | db patch for stock module web_usr permissions
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| 2010-10-03 |
Naama Menda | added prerequisite patches. Need to test Dbversion...
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| 2010-10-01 |
Naama Menda | updated to print genus name in file, if taxon is not...
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| 2010-09-26 |
Naama Menda | db patch for Chado project module
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commit | commitdiff | tree |
| 2010-09-26 |
Naama Menda | fixed typo in solcap loading script
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commit | commitdiff | tree |
| 2010-09-23 |
Naama Menda | db patches fro chado stuff
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commit | commitdiff | tree |
| 2010-09-23 |
Naama Menda | removed printing to STDERR
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commit | commitdiff | tree |
| 2010-09-17 |
Naama Menda | using INSERT... RETURNING table_id in the query instead...
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| 2010-09-10 |
Naama Menda | wrong count of rows to ignore
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commit | commitdiff | tree |
| 2010-09-09 |
Naama Menda | tweaked solcap TA loading script
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commit | commitdiff | tree |
| 2010-09-08 |
Naama Menda | fixed solcap plots loading script . Row labels have...
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| 2010-09-08 |
Naama Menda | loading script for phenotypes scored by Tomato Analyzer...
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commit | commitdiff | tree |
| 2010-09-08 |
Naama Menda | messed up parent-child relationhips between stocks...
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commit | commitdiff | tree |
| 2010-09-05 |
Naama Menda | got rid of annoying DBIC warning
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commit | commitdiff | tree |
| 2010-09-05 |
Naama Menda | loading script for solcap phenotyping data
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commit | commitdiff | tree |
| 2010-09-01 |
Naama Menda | changed loading script to work with a data file , removed...
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commit | commitdiff | tree |
| 2010-08-30 |
Naama Menda | loading script for solcap project and geolocation metadata...
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commit | commitdiff | tree |
| 2010-08-27 |
Naama Menda | removed unnecessary call for base classes
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commit | commitdiff | tree |
| 2010-08-26 |
Naama Menda | deleted unnecessary file
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commit | commitdiff | tree |
| 2010-08-26 |
Naama Menda | loading script for storing 2009 solcap plots in the...
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commit | commitdiff | tree |
| 2010-08-26 |
Naama Menda | applied corrections from Sandy Knapp
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commit | commitdiff | tree |
| 2010-08-25 |
Naama Menda | db patch for loading the sol100 organisms
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commit | commitdiff | tree |
| 2010-08-24 |
Naama Menda | some tweaks to loading script, like resetting all sequences...
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commit | commitdiff | tree |
| 2010-08-20 |
Naama Menda | loading script for solcap accessions
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commit | commitdiff | tree |
| 2010-07-27 |
Naama Menda | removed unnecessary commented out code
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commit | commitdiff | tree |
| 2010-07-27 |
Naama Menda | removed unnecessary module. All code has been moved...
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commit | commitdiff | tree |
| 2010-07-27 |
Naama Menda | added a function for finding distinct dbxrefs linked...
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commit | commitdiff | tree |
| 2010-07-25 |
Naama Menda | moved functions from LocusPage to mason components
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commit | commitdiff | tree |
| 2010-07-19 |
Naama Menda | added an option to return list of objects to get_owners
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commit | commitdiff | tree |
| 2010-07-13 |
Naama Menda | removed init_locus_form function. Should be called...
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commit | commitdiff | tree |
| 2010-07-13 |
Naama Menda | db patch for granting web_usr with insert permissions...
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commit | commitdiff | tree |
| 2010-07-13 |
Naama Menda | db patch for removing unnecessary column from chado...
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commit | commitdiff | tree |
| 2010-06-17 |
Naama Menda | typo in db patch
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commit | commitdiff | tree |
| 2010-06-13 |
Naama Menda | renamed sgn.organismprop to common_nameprop, since...
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| 2010-06-11 |
Naama Menda | removed the -g option . This was a bad idea. image_file...
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| 2010-06-11 |
Naama Menda | Merge branch 'master' of github.com:solgenomics/Phenome
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commit | commitdiff | tree |
| 2010-06-11 |
Naama Menda | changed ls to globe
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commit | commitdiff | tree |
| 2010-06-11 |
Naama Menda | Merge branch 'master' of github.com:solgenomics/Phenome
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commit | commitdiff | tree |
| 2010-06-11 |
Naama Menda | added an option to pass image dir to the loading script...
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commit | commitdiff | tree |
| 2010-06-09 |
Naama Menda | Merge branch 'master' of github.com:solgenomics/Phenome
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commit | commitdiff | tree |
| 2010-06-09 |
Naama Menda | added some options, including handling images in subdirs
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commit | commitdiff | tree |
| 2010-06-08 |
Naama Menda | changed the way phenotypes objects are returned per...
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commit | commitdiff | tree |
| 2010-06-08 |
Naama Menda | Merge branch 'master' of github.com:solgenomics/Phenome
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commit | commitdiff | tree |
| 2010-06-08 |
Naama Menda | some more tweaks to potato data files and script
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commit | commitdiff | tree |
| 2010-05-30 |
Naama Menda | updated format for storing all phenptyping repetitions
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commit | commitdiff | tree |
| 2010-05-29 |
Naama Menda | make sure all phenotypes are stored for multiple replications
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commit | commitdiff | tree |
| 2010-05-29 |
Naama Menda | Merge branch 'master' of github.com:solgenomics/Phenome
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commit | commitdiff | tree |
| 2010-05-29 |
Naama Menda | added more missing terms from the potato cvterm scale
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commit | commitdiff | tree |
| 2010-05-28 |
Naama Menda | tweaked code for uploading potato data, and printing
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commit | commitdiff | tree |
| 2010-05-28 |
Naama Menda | updated data files for potato phenotyped accessions
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commit | commitdiff | tree |
| 2010-05-27 |
Naama Menda | Population object should return an empty object if...
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commit | commitdiff | tree |
| 2010-05-27 |
Naama Menda | re-created DBIC objects for phenome
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commit | commitdiff | tree |
| 2010-05-27 |
Naama Menda | files for loading solCap potato data
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commit | commitdiff | tree |
| 2010-05-24 |
Naama Menda | updated loading script for cvterm scales. These are...
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