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silly typo
2011-12-17
Na
a
m
a Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
p
o
l
i
s
h
ing s
c
ri
p
t f
o
r inserting/updatin
g
p
otato loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
loader fo
r
the potato gen
o
me loci
commit
|
commitdiff
|
tree
2011-12-15
Naam
a
Menda
printin
g
to a la
r
ge s
e
qu
e
nce file
commit
|
commitdiff
|
tree
2011-12-14
Naama
Menda
fixed f
e
tching of
S
olyc mrna s
e
quences
commit
|
commitdiff
|
tree
2011-12-14
Naama Menda
adding itag mrna sequences to loci blast db
commit
|
commitdiff
|
tree
2011-11-23
Naa
m
a
Menda
f
ixed
c
vterm name for plo
t
and me
m
ber stock
rela
t
ionship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Na
a
ma
Menda
capitaliz
i
n
g
Quality
t
erm
commit
|
commitdiff
|
tree
2011-11-22
Naama
Menda
refining add_unigene meth
o
d
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
Merge branch '
m
a
s
ter' i
n
to topic
/
locus_c
o
ntroller
commit
|
commitdiff
|
tree
2011-11-16
Naama
Menda
mi
s
sing bind
v
alu
e
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
added locu
s
fie
l
d to the sea
r
ch
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
adding
disconnect
f
or dbh
w
ithout aut
o
commit
commit
|
commitdiff
|
tree
2011-11-08
Naam
a
Me
n
d
a
u
p
date DBIx::Class
phenome s
c
h
e
ma
c
l
asses
commit
|
commitdiff
|
tree
2011-11-07
Naama M
e
n
d
a
Merge branch 'ma
s
ter'
i
nto
t
o
p
ic/locus_controlle
r
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
resolved conflict
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
added acces
s
ors f
o
r
geno
m
e
_
l
ocus name fiel
d
commit
|
commitdiff
|
tree
2011-11-09
Na
a
ma Menda
d
i
sablin
g
a
utoco
m
mit
commit
|
commitdiff
|
tree
2011-11-07
N
aama Menda
patch fo
r
adding
a
l
ocus f
i
e
l
d to
the
locus ta
b
le
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naam
a
Menda
ad
d
ing phenotype props to sol
c
ap ph
e
n
o
types
commit
|
commitdiff
|
tree
2011-10-30
N
a
a
m
a Menda
u
sing dbc->dbh instead of CXG
M
::D
B
::Connec
t
ion
commit
|
commitdiff
|
tree
2011-10-15
N
aama
M
enda
o
bsolet
i
ng loc
u
s
a
lias if the ITAG id is ju
s
t the
a
lia
s
commit
|
commitdiff
|
tree
2011-10-15
Naama Me
n
da
script for
obsole
t
ing ITAG loci f
r
om pheno
m
e
.
l
o
c
u
s
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
remov
i
ng
trail
i
ng space
s
from
u
nit name
commit
|
commitdiff
|
tree
2011-10-15
N
a
ama M
e
nda
re
m
oving trailin
g
spacesfromunit na
m
e
commit
|
commitdiff
|
tree
2011-10-14
Naama
Me
n
da
fixing bu
g
in merge_locus function whe
n
merg
e
d locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama M
e
n
d
a
making su
r
e plant
h
ait t
e
rm
s
are
f
ound
commit
|
commitdiff
|
tree
2011-10-12
Naama Men
d
a
looking at direct child te
r
ms fo
r
qu
a
litative terms
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma Menda
loadin
g
qualitative t
e
rms
c
orrectly
commit
|
commitdiff
|
tree
2011-10-11
N
aama Menda
adding unit ontology cv
t
e
rms to
t
he pheno
t
y
e
ps
commit
|
commitdiff
|
tree
2011-10-03
Naama Men
d
a
just warning i
f
paren
t
sto
c
k is not found
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
parsi
n
g
more options
f
or
sol
c
ap image
f
i
les
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
f
ind the year of t
h
e proect
fro
m
the m
e
tadat
a
f
i
le
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
year should be a property of the project
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
searc
g
is bet
t
e
r than fin
d
he
r
e
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naam
a
Menda
skippin
g
for
n
on-e
x
isting plots
commit
|
commitdiff
|
tree
2011-09-27
Naama Me
n
da
checkin
g
correctl
y
i
f
a
n
i
mage is loaded an
d
if wa
s
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naa
m
a Menda
t
ypo
commit
|
commitdiff
|
tree
2011-09-27
N
a
ama M
e
nda
bett
e
r printing of
er
r
or me
s
sag
e
s
commit
|
commitdiff
|
tree
2011-09-27
Na
a
m
a
Menda
add
e
d a check
for exist
i
n
g
s
tock-im
a
ge l
i
n
ks
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
last typo?
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
N
aama M
e
nd
a
t
y
p
o
commit
|
commitdiff
|
tree
2011-09-23
Naam
a
Menda
added exception for planting date
p
r
o
p
e
rty
commit
|
commitdiff
|
tree
2011-09-23
Naama
M
enda
a
dde
d
year option for fin
d
in
g
unique plot name
s
commit
|
commitdiff
|
tree
2011-09-18
Na
a
ma Menda
setting
the transactio
n
prop
e
rly
commit
|
commitdiff
|
tree
2011-09-18
Naama Menda
checking i
f
a synonym v
a
lue was already loaded
commit
|
commitdiff
|
tree
2011-09-17
Naama Menda
loader for
s
olc
a
p
images
commit
|
commitdiff
|
tree
2011-09-17
N
a
ama Me
n
da
using txn
_
d
o
f
or t
h
e
t
r
an
s
a
c
tion
commit
|
commitdiff
|
tree
2011-09-16
Naama Mend
a
m
o
di
f
ied options
for
loading
s
olcap TA data
commit
|
commitdiff
|
tree
2011-09-16
Naa
m
a Menda
ad
d
ed parsing of
q
ualitat
i
ve tr
a
its i
n
to the toma
t
o
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
f
i
xed lo
a
din
g
stock ow
n
er int
o
the
right place
commit
|
commitdiff
|
tree
2011-09-14
Naama Me
n
da
n
o need to clone the
d
b
h
commit
|
commitdiff
|
tree
2011-09-14
Na
a
ma Menda
a
d
ded mis
s
ing
p
henome
D
BIC classes
commit
|
commitdiff
|
tree
2011-09-14
Naa
m
a Men
d
a
using CXGN::P
h
enom
e
::Schema for ch
e
cking
/
ins
e
rting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Na
a
ma Men
d
a
removed out
d
ated
l
oading script
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
up
d
ated
script for loa
d
i
n
g
s
olcap acce
s
sions
commit
|
commitdiff
|
tree
2011-09-14
Na
a
ma
M
enda
updated CXGN::Phenome::Sche
m
a c
l
asses
commit
|
commitdiff
|
tree
2011-09-13
N
aam
a
Menda
typo
commit
|
commitdiff
|
tree
2011-09-04
Naama M
e
nda
load
i
ng script for SolCAP potato images
commit
|
commitdiff
|
tree
2011-09-02
N
a
ama Menda
loder for ima
g
es
f
rom Sandy Knapp
commit
|
commitdiff
|
tree
2011-08-31
Naama Menda
adding date prop
to experiments
commit
|
commitdiff
|
tree
2011-08-28
Naama Menda
l
o
ading script for potato solcap data
.
Hopefully n
e
xt
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
N
a
ama Mend
a
loade
r
for TAIR loci
commit
|
commitdiff
|
tree
2011-06-19
Na
a
ma Me
n
d
a
upda
t
ed
s
o
lca
p
s
t
uff for reloading
the potato 20
0
9
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
Naama Menda
patch for changes
i
n Chad
o
ND sc
h
ema
commit
|
commitdiff
|
tree
2011-04-22
N
a
ama Menda
d
b patch
f
or granting delete on
m
etadata
t
o w
e
b_
u
sr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama Menda
u
pdated DBI
x
classes , n
o
m
o
re phenome
.
ph
e
noty
p
e
ta
b
le
commit
|
commitdiff
|
tree
2011-04-18
Naa
m
a Me
n
da
skipp
i
ng
m
e
tadata insert if one of the FK
s
is null
commit
|
commitdiff
|
tree
2011-04-17
Naa
m
a Me
n
d
a
adding web
_
usr permissio
n
s to met
a
data table
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
typo
in query
commit
|
commitdiff
|
tree
2011-04-17
N
aama Menda
forgot to add web_usr permissio
n
s
commit
|
commitdiff
|
tree
2011-04-17
Naama
Mend
a
u
sing stock
_
a
l
l
ele and
s
tock_im
a
ge i
n
stead of stockprop
commit
|
commitdiff
|
tree
2011-04-16
Naama Menda
db patc
h
for migrating stock image,
a
llele, and
o
wn
e
r
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama Menda
refactoring
f
unctio
n
s tha
t
use i
n
d
i
v
iduals
.
Now
we
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
typos
commit
|
commitdiff
|
tree
2011-04-01
N
aama Menda
deleting firs
t
existing allele
l
i
n
ks
commit
|
commitdiff
|
tree
2011-04-01
N
aa
m
a
M
en
d
a
db patc
h
for c
o
rre
c
tl
y
storin
g
a
l
l al
l
eles linked with
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
select
i
ng all
alleles, including d
e
fault
s
ones
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
remove
d
s
ear
c
h
i
ng
l
oci by stock phenot
y
pes
.
To
do this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama M
e
nda
a
dded an option to
p
ass the image
_
pa
t
h
.
this lets
r
un
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
N
aama Menda
forgot to allow
d
u
plicate
values
.
W
it
h
out th
i
s multiple
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Mend
a
p
o
lish
e
d loading script
f
or l
y
coti
l
l images
commit
|
commitdiff
|
tree
2011-03-28
Naam
a
Me
n
da
loading script fo
r
lycotill
accessio
n
s
commit
|
commitdiff
|
tree
2011-03-23
Naama
Menda
dbpatch for fixing locus_
m
arker FK
commit
|
commitdiff
|
tree
2011-03-22
Naa
m
a Menda
added an i
n
terim
fu
n
ction f
o
r
g
etting popu
l
ation object
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
N
aama Menda
d
b patch
f
o
r moving
s
to
c
k annotat
i
o
ns
f
r
o
m stock_dbxre
f
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama Menda
a
d
ded missing de
p
endency t
o
db
p
athc
commit
|
commitdiff
|
tree
2011-03-09
Naama Menda
silly typo in dbpa
t
ch
commit
|
commitdiff
|
tree
2011-03-09
Naama M
e
nda
db pa
t
ch f
o
r the m
i
s
s
ing link
to stock_id f
r
om the
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
Naama
M
enda
s
illy typo
commit
|
commitdiff
|
tree
2011-03-03
Naama
M
enda
fixed loa
d
ing e
x
perim
e
nt ids for each
st
o
c
k phenotyped
commit
|
commitdiff
|
tree
2011-02-07
Naa
m
a Menda
db path
for adding undef o
p
ti
o
n to alle
l
e mode_
o
f_i
n
heritanc
.
.
.
commit
|
commitdiff
|
tree
2010-12-08
Naama Me
n
da
filtering ob
s
o
l
ete loci and non-cur
r
ent un
i
genes
commit
|
commitdiff
|
tree
2010-12-01
Naama Men
d
a
p
a
t
ch
f
or u
p
d
ati
n
g th
e
u
n
ique const
r
aint on nd_exper
i
m
e
nt_ph
.
.
.
commit
|
commitdiff
|
tree
2010-11-24
N
aa
m
a
Menda
upda
t
ing ch
r
omosome
n
u
mber for loc
i
wi
t
h
i
tag matches
commit
|
commitdiff
|
tree
2010-11-24
N
a
ama Menda
fix
e
d typos in db pa
t
ch
commit
|
commitdiff
|
tree
2010-11-24
Naama
M
enda
setting i
t
ag synonym preferre
d
=f
commit
|
commitdiff
|
tree
next