| 2011-09-14 |
Naama Menda | updated script for loading solcap accessions
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| 2011-09-14 |
Naama Menda | updated CXGN::Phenome::Schema classes
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| 2011-09-13 |
Naama Menda | typo
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| 2011-09-04 |
Naama Menda | loading script for SolCAP potato images
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| 2011-09-02 |
Naama Menda | loder for images from Sandy Knapp
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| 2011-08-31 |
Naama Menda | adding date prop to experiments
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| 2011-08-28 |
Naama Menda | loading script for potato solcap data. Hopefully next...
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| 2011-08-25 |
Naama Menda | loader for TAIR loci
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| 2011-06-19 |
Naama Menda | updated solcap stuff for reloading the potato 2009...
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| 2011-05-09 |
Naama Menda | patch for changes in Chado ND schema
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| 2011-04-22 |
Naama Menda | db patch for granting delete on metadata to web_usr...
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| 2011-04-21 |
Naama Menda | updated DBIx classes , no more phenome.phenotype table
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| 2011-04-18 |
Naama Menda | skipping metadata insert if one of the FKs is null
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| 2011-04-17 |
Naama Menda | adding web_usr permissions to metadata table
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| 2011-04-17 |
Naama Menda | typo in query
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| 2011-04-17 |
Naama Menda | forgot to add web_usr permissions
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| 2011-04-17 |
Naama Menda | using stock_allele and stock_image instead of stockprop
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| 2011-04-16 |
Naama Menda | db patch for migrating stock image, allele, and owner...
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| 2011-04-02 |
Naama Menda | refactoring functions that use individuals. Now we...
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| 2011-04-01 |
Naama Menda | typos
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| 2011-04-01 |
Naama Menda | deleting first existing allele links
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| 2011-04-01 |
Naama Menda | db patch for correctly storing all alleles linked with...
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| 2011-04-01 |
Naama Menda | selecting all alleles, including defaults ones
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| 2011-04-01 |
Naama Menda | removed searching loci by stock phenotypes. To do this...
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| 2011-04-02 |
Naama Menda | added an option to pass the image_path. this lets run...
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| 2011-03-29 |
Naama Menda | forgot to allow duplicate values. Without this multiple...
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| 2011-04-01 |
Naama Menda | polished loading script for lycotill images
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| 2011-03-28 |
Naama Menda | loading script for lycotill accessions
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| 2011-03-23 |
Naama Menda | dbpatch for fixing locus_marker FK
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| 2011-03-22 |
Naama Menda | added an interim function for getting population object...
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| 2011-03-17 |
Naama Menda | db patch for moving stock annotations from stock_dbxref...
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| 2011-03-10 |
Naama Menda | added missing dependency to db pathc
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commit | commitdiff | tree |
| 2011-03-09 |
Naama Menda | silly typo in dbpatch
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| 2011-03-09 |
Naama Menda | db patch for the missing link to stock_id from the...
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| 2011-03-04 |
Naama Menda | silly typo
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| 2011-03-03 |
Naama Menda | fixed loading experiment ids for each stock phenotyped
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| 2011-02-07 |
Naama Menda | db path for adding undef option to allele mode_of_inheritanc...
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| 2010-12-08 |
Naama Menda | filtering obsolete loci and non-current unigenes
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| 2010-12-01 |
Naama Menda | patch for updating the unique constraint on nd_experiment_ph...
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| 2010-11-24 |
Naama Menda | updating chromosome number for loci with itag matches
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| 2010-11-24 |
Naama Menda | fixed typos in db patch
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| 2010-11-24 |
Naama Menda | setting itag synonym preferred=f
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| 2010-11-24 |
Naama Menda | loading script for ITAG2 - loci matches
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| 2010-11-24 |
Naama Menda | got rid of more last_insert_id calling
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| 2010-11-24 |
Naama Menda | getting rid of silly last_insert_id
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| 2010-11-05 |
Naama Menda | another fix for query returning database id
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| 2010-11-05 |
Naama Menda | fixed insert queries to return the database id, since...
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| 2010-11-05 |
Naama Menda | fixed a bug in getting database id after an insert
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| 2010-11-03 |
Naama Menda | updated version for BCS required for Phenome
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| 2010-11-01 |
Naama Menda | replaced find with create_with for accession cvterm
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| 2010-10-29 |
Naama Menda | added stock_dbxrefprop table to db patch.
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| 2010-10-29 |
Naama Menda | forgot to use Try::Tiny
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| 2010-10-29 |
Naama Menda | typo
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| 2010-10-29 |
Naama Menda | fixed population update function.
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| 2010-10-28 |
Naama Menda | db patches should work right now, with loading stock_id...
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| 2010-10-28 |
Naama Menda | forgeot to get rid of STDERR printing
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| 2010-10-28 |
Naama Menda | added db_pathces required to Build.PL
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| 2010-10-28 |
Naama Menda | applies changes to ND schema
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| 2010-10-28 |
Naama Menda | db patch moved from sgn/topic/solcap_marker
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| 2010-10-28 |
Naama Menda | solcap TA loading script also needs to store 1 experiment...
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| 2010-10-28 |
Naama Menda | added genotype experiments ,and linking the stock ...
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| 2010-10-28 |
Naama Menda | added accessors for stock_id . Need to run AddStockLInks...
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| 2010-10-28 |
Naama Menda | added function for finding genotype regions per genotype
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commit | commitdiff | tree |
| 2010-10-28 |
Naama Menda | db patch for adding stock_id rows to individual, phenotype...
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| 2010-10-28 |
Naama Menda | db patch for adding a stock_id field for tables about...
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| 2010-10-28 |
Naama Menda | removed emacs backup file
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commit | commitdiff | tree |
| 2010-10-26 |
Naama Menda | solcap loading script should load one experiment per run
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commit | commitdiff | tree |
| 2010-10-26 |
Naama Menda | solcap data should load with one nd_experiment per run
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commit | commitdiff | tree |
| 2010-10-26 |
Naama Menda | added txn_rollback when 'try' fails. Doesn't see to...
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| 2010-10-26 |
Naama Menda | added the allele_phenotype field to the locus/allele...
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| 2010-10-26 |
Naama Menda | found a bug with storing phenotypes. Need to update...
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| 2010-10-25 |
Naama Menda | fixed db patch for phenome data migration into chado...
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commit | commitdiff | tree |
| 2010-10-23 |
Naama Menda | patch for migrating phenome individual and population...
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commit | commitdiff | tree |
| 2010-10-23 |
Naama Menda | got rid of dbh checking in constructor
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commit | commitdiff | tree |
| 2010-10-23 |
Naama Menda | fixed POD
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commit | commitdiff | tree |
| 2010-10-23 |
Naama Menda | got rid of checking dbh in constructor, and added a...
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| 2010-10-23 |
Naama Menda | cv_name for sgn_person_id should be local
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| 2010-10-23 |
Naama Menda | changed cv_name for sgn image ids to local
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| 2010-10-20 |
Naama Menda | person_id should be a local prop and not stockprop
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| 2010-10-20 |
Naama Menda | added more verbose user output in solcap phenonotyping...
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| 2010-10-19 |
Naama Menda | rename plots loading script to a more generic name...
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commit | commitdiff | tree |
| 2010-10-15 |
Naama Menda | fixed option passed to get)_unigenes function
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commit | commitdiff | tree |
| 2010-10-12 |
Naama Menda | fixed options in image loading script
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commit | commitdiff | tree |
| 2010-10-12 |
Naama Menda | loading script for solcap images
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commit | commitdiff | tree |
| 2010-10-05 |
Naama Menda | db patch for stock module web_usr permissions
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commit | commitdiff | tree |
| 2010-10-03 |
Naama Menda | added prerequisite patches. Need to test Dbversion...
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commit | commitdiff | tree |
| 2010-10-01 |
Naama Menda | updated to print genus name in file, if taxon is not...
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commit | commitdiff | tree |
| 2010-09-26 |
Naama Menda | db patch for Chado project module
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commit | commitdiff | tree |
| 2010-09-26 |
Naama Menda | fixed typo in solcap loading script
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commit | commitdiff | tree |
| 2010-09-23 |
Naama Menda | db patches fro chado stuff
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commit | commitdiff | tree |
| 2010-09-23 |
Naama Menda | removed printing to STDERR
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commit | commitdiff | tree |
| 2010-09-17 |
Naama Menda | using INSERT... RETURNING table_id in the query instead...
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commit | commitdiff | tree |
| 2010-09-10 |
Naama Menda | wrong count of rows to ignore
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commit | commitdiff | tree |
| 2010-09-09 |
Naama Menda | tweaked solcap TA loading script
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commit | commitdiff | tree |
| 2010-09-08 |
Naama Menda | fixed solcap plots loading script . Row labels have...
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commit | commitdiff | tree |
| 2010-09-08 |
Naama Menda | loading script for phenotypes scored by Tomato Analyzer...
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commit | commitdiff | tree |
| 2010-09-08 |
Naama Menda | messed up parent-child relationhips between stocks...
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commit | commitdiff | tree |
| 2010-09-05 |
Naama Menda | got rid of annoying DBIC warning
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commit | commitdiff | tree |
| 2010-09-05 |
Naama Menda | loading script for solcap phenotyping data
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commit | commitdiff | tree |
| 2010-09-01 |
Naama Menda | changed loading script to work with a data file , removed...
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