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typo
2012-04-18
Naa
m
a M
e
nd
a
typ
o
commit
|
commitdiff
|
tree
2012-04-18
Naama Menda
a
d
ded
a
check
for stock_owner row
commit
|
commitdiff
|
tree
2012-04-17
Naa
m
a Menda
corrected loader for ca
s
sava phenot
y
pi
n
g
p
r
oject
s
commit
|
commitdiff
|
tree
2012-04-17
Naama Menda
corrected loader for ca
s
s
a
v
a
p
h
e
notyping projects
commit
|
commitdiff
|
tree
2012-03-15
Naama Me
n
d
a
error in fetching dbxref accession for a
pub obj
e
ct
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
modified ontology
a
ssociation s
c
r
i
p
t
to work wit
h
s
t
ocks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Na
a
ma Menda
updated dump script
.
Make this a cron job
.
.
commit
|
commitdiff
|
tree
2012-01-11
Na
a
m
a
Menda
r
emoving version num
b
ers fro
m
Solyc gene i
d
s
commit
|
commitdiff
|
tree
2012-01-09
Naama Menda
moved
t
h
e gen
o
type json to
genotyep
p
r
op
commit
|
commitdiff
|
tree
2012-01-06
Naa
m
a Menda
script f
o
r re
l
oading the solcap snp positions as designated
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Naama Mend
a
loade
r
for solcap Infinium
arr
a
y
snp ge
n
ot
y
pes
commit
|
commitdiff
|
tree
2011-12-20
Naama
M
end
a
fix
e
d typos
commit
|
commitdiff
|
tree
2011-12-18
Naama Menda
load
e
r fo
r
the cassava phe
n
otypes
commit
|
commitdiff
|
tree
2011-12-17
Naama Men
d
a
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
p
o
l
i
s
hing
scri
p
t for in
s
e
rting/
u
pdating potato loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama Mend
a
loader f
o
r t
h
e
p
otato ge
n
ome loci
commit
|
commitdiff
|
tree
2011-12-15
Naama
M
enda
p
r
i
nti
n
g
to a large sequence file
commit
|
commitdiff
|
tree
2011-12-14
N
a
ama
M
enda
fi
x
ed fetching of S
o
lyc
m
rna sequences
commit
|
commitdiff
|
tree
2011-12-14
Naama Me
n
da
addi
n
g itag mrna
seque
n
ces to loci
blast db
commit
|
commitdiff
|
tree
2011-11-23
Naama Menda
fixed cv
t
erm nam
e
for plot and member st
o
ck rel
a
tionship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Naama Menda
capitalizing Quali
t
y term
commit
|
commitdiff
|
tree
2011-11-22
N
a
ama Menda
refining
add_unigene method
commit
|
commitdiff
|
tree
2011-11-16
Naam
a
Menda
M
e
rge
branch 'master' into
t
o
pic/
l
oc
u
s_con
t
roller
commit
|
commitdiff
|
tree
2011-11-16
Naama
M
enda
missing bind value
commit
|
commitdiff
|
tree
2011-11-15
Naam
a
M
end
a
a
d
ded locus field to the search
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
ad
d
in
g
discon
n
ect for
dbh without autocommit
commit
|
commitdiff
|
tree
2011-11-08
Naama Menda
u
p
date DBIx::Cla
s
s p
h
e
nome
s
c
hem
a
clas
s
e
s
commit
|
commitdiff
|
tree
2011-11-07
Naama Mend
a
M
e
rge bran
c
h 'master'
into topic/locus
_
c
o
ntrol
l
er
commit
|
commitdiff
|
tree
2011-11-07
Naama
M
en
d
a
re
s
olved conflict
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
added a
c
ces
s
ors
for
g
enome_locus name fi
e
ld
commit
|
commitdiff
|
tree
2011-11-09
Naama Mend
a
d
i
sabling autocom
m
i
t
commit
|
commitdiff
|
tree
2011-11-07
N
aama Menda
pa
t
c
h
for addin
g
a locus
f
i
eld to the locus tabl
e
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Menda
adding
phenotype prop
s
to s
o
lcap phenoty
p
es
commit
|
commitdiff
|
tree
2011-10-30
N
a
ama
Menda
using dbc->dbh ins
t
ead of CXGM
:
:DB::Connec
t
ion
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obsole
t
ing
locus alias if the ITAG id is just
t
h
e
alias
commit
|
commitdiff
|
tree
2011-10-15
Naama
M
e
n
da
script for obsoleting ITAG l
o
ci f
r
om phenome
.
locus
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
removin
g
trailing space
s
fr
o
m uni
t
n
ame
commit
|
commitdiff
|
tree
2011-10-15
Naama Men
d
a
r
e
moving tra
i
l
ing
s
pace
s
fromunit na
m
e
commit
|
commitdiff
|
tree
2011-10-14
Naama Me
n
da
fixing bu
g
in merge_locus function when merged locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
N
aama Menda
m
a
king sure plant hait t
e
rm
s
are found
commit
|
commitdiff
|
tree
2011-10-12
Naam
a
M
e
nd
a
looking
a
t direct child terms for qualitativ
e
t
erms
commit
|
commitdiff
|
tree
2011-10-11
Naama Menda
loading qualitati
v
e
terms correc
t
ly
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma Mend
a
a
d
ding unit onto
l
og
y
c
vterms to the
phen
o
ty
e
ps
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
just w
a
rning if parent s
t
o
ck
i
s not foun
d
commit
|
commitdiff
|
tree
2011-10-03
Naama Me
n
da
typo
commit
|
commitdiff
|
tree
2011-10-03
N
aa
m
a Menda
parsing
more o
p
t
i
o
n
s for s
o
lcap image files
commit
|
commitdiff
|
tree
2011-10-02
Naam
a
Menda
find the year of th
e
proect
from the metadata
file
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
year should be a property o
f
t
h
e
proje
c
t
commit
|
commitdiff
|
tree
2011-10-02
N
a
ama Men
d
a
searcg is better than find here
commit
|
commitdiff
|
tree
2011-09-27
Na
a
ma
M
enda
ty
p
o
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
skip
p
ing for
n
on
-
existing plots
commit
|
commitdiff
|
tree
2011-09-27
N
aama Mend
a
c
hecking correctly if an image
is
l
oaded and
if w
a
s
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Mend
a
typ
o
commit
|
commitdiff
|
tree
2011-09-27
N
aama Menda
better printing of error messages
commit
|
commitdiff
|
tree
2011-09-27
Naama
Menda
added a
check for existing
stock-image l
i
n
ks
commit
|
commitdiff
|
tree
2011-09-23
N
aa
m
a Menda
last typo?
commit
|
commitdiff
|
tree
2011-09-23
N
a
ama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
Na
a
ma
Menda
ty
p
o
commit
|
commitdiff
|
tree
2011-09-23
Naama M
e
n
da
add
e
d
exception for p
l
anting date property
commit
|
commitdiff
|
tree
2011-09-23
Na
a
ma Men
d
a
a
d
ded year o
p
tion for
f
inding u
n
ique plot names
commit
|
commitdiff
|
tree
2011-09-18
Naama
M
e
n
da
sett
i
ng the transaction
properly
commit
|
commitdiff
|
tree
2011-09-18
Naama Menda
checking
if a sy
n
ony
m
v
alue was alread
y
l
oaded
commit
|
commitdiff
|
tree
2011-09-17
N
a
ama M
e
nda
lo
a
der fo
r
s
o
lcap
image
s
commit
|
commitdiff
|
tree
2011-09-17
Na
a
ma Men
d
a
u
sing txn_do for t
h
e transactio
n
commit
|
commitdiff
|
tree
2011-09-16
Naama Me
n
da
modified options f
o
r
l
oading solca
p
TA data
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
added parsing of
qualit
a
ti
v
e traits
into
t
he tomato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama
M
enda
fixe
d
l
o
ading sto
c
k owner into the right
p
lac
e
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
n
o
need to clone th
e
dbh
commit
|
commitdiff
|
tree
2011-09-14
Naam
a
M
enda
added
m
issin
g
phenome D
B
IC classes
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
u
sing CX
G
N
::Phenome::Schema for
checking/inserting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
removed outdated loading script
commit
|
commitdiff
|
tree
2011-09-14
Naama Mend
a
updated
s
cript for loading
solc
a
p accessi
o
n
s
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
update
d
CX
G
N::Phen
o
me::Schema
c
lasses
commit
|
commitdiff
|
tree
2011-09-13
Naama Men
d
a
typo
commit
|
commitdiff
|
tree
2011-09-04
Na
a
ma Me
n
da
loadi
n
g script for SolC
A
P potato im
a
ges
commit
|
commitdiff
|
tree
2011-09-02
N
aam
a
Men
d
a
loder for
i
mages from
Sandy Kn
a
pp
commit
|
commitdiff
|
tree
2011-08-31
Na
a
ma
Menda
a
d
din
g
date prop to experi
m
ents
commit
|
commitdiff
|
tree
2011-08-28
N
a
am
a
M
enda
loading sc
r
ipt for potato sol
c
ap dat
a
.
H
o
pefully ne
x
t
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
Naama Menda
load
e
r
for TAIR l
o
ci
commit
|
commitdiff
|
tree
2011-06-19
Naama Menda
updated solcap stuff for reloadi
n
g the potato 2009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
N
aama Menda
patch for change
s
in Chado ND schema
commit
|
commitdiff
|
tree
2011-04-22
Naama Menda
d
b patch for g
r
anting dele
t
e on metadata to web_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama Menda
updated DBIx
classes , no more phenom
e
.
phenotype table
commit
|
commitdiff
|
tree
2011-04-18
N
aam
a
Men
d
a
skipping metadata insert if one of
the FKs is null
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
adding web_usr permissions to metadata ta
b
le
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
typo in query
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
forgot to add web_usr permissions
commit
|
commitdiff
|
tree
2011-04-17
Naam
a
Menda
using s
t
ock_allele an
d
stock
_
image instead o
f
stockprop
commit
|
commitdiff
|
tree
2011-04-16
Naam
a
Menda
db patch for migrating stoc
k
image, al
l
ele
,
a
n
d
owner
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
N
a
ama Me
n
da
refac
t
o
r
i
n
g
functi
o
ns
t
hat use
in
d
i
v
iduals
.
Now we
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Me
n
d
a
typos
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
d
elet
i
n
g
firs
t
existing allele
l
inks
commit
|
commitdiff
|
tree
2011-04-01
Naam
a
Menda
db
patch
f
or correctly stor
i
ng all
allel
e
s linked
w
ith
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
s
e
lect
i
ng a
l
l al
l
eles, incl
u
d
ing
d
efa
u
lts ones
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
r
em
o
ve
d
sea
r
ching lo
c
i by stoc
k
phe
n
otypes
.
To
d
o this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama Menda
a
dded
an option to
p
ass the image_path
.
thi
s
lets run
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
Naam
a
Menda
forgot to allow
d
uplic
a
te values
.
Without this
mult
i
pl
e
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama
M
e
n
d
a
p
ol
i
s
hed loadi
n
g script for lycotill
images
commit
|
commitdiff
|
tree
2011-03-28
Naama Menda
loading script fo
r
l
y
cotill
acc
e
ssions
commit
|
commitdiff
|
tree
2011-03-23
Naama Me
n
da
dbpatch for
fixing locus_mark
e
r
FK
commit
|
commitdiff
|
tree
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