Public Git Hosting - phenome.git/search

2011-10-02	Naama Menda	year should be a property of the project	commit \| commitdiff \| tree
2011-10-02	Naama Menda	searcg is better than find here	commit \| commitdiff \| tree
2011-09-27	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-27	Naama Menda	skipping for non-existing plots	commit \| commitdiff \| tree
2011-09-27	Naama Menda	checking correctly if an image is loaded and if was...	commit \| commitdiff \| tree
2011-09-27	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-27	Naama Menda	better printing of error messages	commit \| commitdiff \| tree
2011-09-27	Naama Menda	added a check for existing stock-image links	commit \| commitdiff \| tree
2011-09-23	Naama Menda	last typo?	commit \| commitdiff \| tree
2011-09-23	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-23	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-23	Naama Menda	added exception for planting date property	commit \| commitdiff \| tree
2011-09-23	Naama Menda	added year option for finding unique plot names	commit \| commitdiff \| tree
2011-09-18	Naama Menda	setting the transaction properly	commit \| commitdiff \| tree
2011-09-18	Naama Menda	checking if a synonym value was already loaded	commit \| commitdiff \| tree
2011-09-17	Naama Menda	loader for solcap images	commit \| commitdiff \| tree
2011-09-17	Naama Menda	using txn_do for the transaction	commit \| commitdiff \| tree
2011-09-16	Naama Menda	modified options for loading solcap TA data	commit \| commitdiff \| tree
2011-09-16	Naama Menda	added parsing of qualitative traits into the tomato...	commit \| commitdiff \| tree
2011-09-14	Naama Menda	fixed loading stock owner into the right place	commit \| commitdiff \| tree
2011-09-14	Naama Menda	no need to clone the dbh	commit \| commitdiff \| tree
2011-09-14	Naama Menda	added missing phenome DBIC classes	commit \| commitdiff \| tree
2011-09-14	Naama Menda	using CXGN::Phenome::Schema for checking/inserting...	commit \| commitdiff \| tree
2011-09-14	Naama Menda	removed outdated loading script	commit \| commitdiff \| tree
2011-09-14	Naama Menda	updated script for loading solcap accessions	commit \| commitdiff \| tree
2011-09-14	Naama Menda	updated CXGN::Phenome::Schema classes	commit \| commitdiff \| tree
2011-09-13	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-04	Naama Menda	loading script for SolCAP potato images	commit \| commitdiff \| tree
2011-09-02	Naama Menda	loder for images from Sandy Knapp	commit \| commitdiff \| tree
2011-08-31	Naama Menda	adding date prop to experiments	commit \| commitdiff \| tree
2011-08-28	Naama Menda	loading script for potato solcap data. Hopefully next...	commit \| commitdiff \| tree
2011-08-25	Naama Menda	loader for TAIR loci	commit \| commitdiff \| tree
2011-06-19	Naama Menda	updated solcap stuff for reloading the potato 2009...	commit \| commitdiff \| tree
2011-05-09	Naama Menda	patch for changes in Chado ND schema	commit \| commitdiff \| tree
2011-04-22	Naama Menda	db patch for granting delete on metadata to web_usr...	commit \| commitdiff \| tree
2011-04-21	Naama Menda	updated DBIx classes , no more phenome.phenotype table	commit \| commitdiff \| tree
2011-04-18	Naama Menda	skipping metadata insert if one of the FKs is null	commit \| commitdiff \| tree
2011-04-17	Naama Menda	adding web_usr permissions to metadata table	commit \| commitdiff \| tree
2011-04-17	Naama Menda	typo in query	commit \| commitdiff \| tree
2011-04-17	Naama Menda	forgot to add web_usr permissions	commit \| commitdiff \| tree
2011-04-17	Naama Menda	using stock_allele and stock_image instead of stockprop	commit \| commitdiff \| tree
2011-04-16	Naama Menda	db patch for migrating stock image, allele, and owner...	commit \| commitdiff \| tree
2011-04-02	Naama Menda	refactoring functions that use individuals. Now we...	commit \| commitdiff \| tree
2011-04-01	Naama Menda	typos	commit \| commitdiff \| tree
2011-04-01	Naama Menda	deleting first existing allele links	commit \| commitdiff \| tree
2011-04-01	Naama Menda	db patch for correctly storing all alleles linked with...	commit \| commitdiff \| tree
2011-04-01	Naama Menda	selecting all alleles, including defaults ones	commit \| commitdiff \| tree
2011-04-01	Naama Menda	removed searching loci by stock phenotypes. To do this...	commit \| commitdiff \| tree
2011-04-02	Naama Menda	added an option to pass the image_path. this lets run...	commit \| commitdiff \| tree
2011-03-29	Naama Menda	forgot to allow duplicate values. Without this multiple...	commit \| commitdiff \| tree
2011-04-01	Naama Menda	polished loading script for lycotill images	commit \| commitdiff \| tree
2011-03-28	Naama Menda	loading script for lycotill accessions	commit \| commitdiff \| tree
2011-03-23	Naama Menda	dbpatch for fixing locus_marker FK	commit \| commitdiff \| tree
2011-03-22	Naama Menda	added an interim function for getting population object...	commit \| commitdiff \| tree
2011-03-17	Naama Menda	db patch for moving stock annotations from stock_dbxref...	commit \| commitdiff \| tree
2011-03-10	Naama Menda	added missing dependency to db pathc	commit \| commitdiff \| tree
2011-03-09	Naama Menda	silly typo in dbpatch	commit \| commitdiff \| tree
2011-03-09	Naama Menda	db patch for the missing link to stock_id from the...	commit \| commitdiff \| tree
2011-03-04	Naama Menda	silly typo	commit \| commitdiff \| tree
2011-03-03	Naama Menda	fixed loading experiment ids for each stock phenotyped	commit \| commitdiff \| tree
2011-02-07	Naama Menda	db path for adding undef option to allele mode_of_inheritanc...	commit \| commitdiff \| tree
2010-12-08	Naama Menda	filtering obsolete loci and non-current unigenes	commit \| commitdiff \| tree
2010-12-01	Naama Menda	patch for updating the unique constraint on nd_experiment_ph...	commit \| commitdiff \| tree
2010-11-24	Naama Menda	updating chromosome number for loci with itag matches	commit \| commitdiff \| tree
2010-11-24	Naama Menda	fixed typos in db patch	commit \| commitdiff \| tree
2010-11-24	Naama Menda	setting itag synonym preferred=f	commit \| commitdiff \| tree
2010-11-24	Naama Menda	loading script for ITAG2 - loci matches	commit \| commitdiff \| tree
2010-11-24	Naama Menda	got rid of more last_insert_id calling	commit \| commitdiff \| tree
2010-11-24	Naama Menda	getting rid of silly last_insert_id	commit \| commitdiff \| tree
2010-11-05	Naama Menda	another fix for query returning database id	commit \| commitdiff \| tree
2010-11-05	Naama Menda	fixed insert queries to return the database id, since...	commit \| commitdiff \| tree
2010-11-05	Naama Menda	fixed a bug in getting database id after an insert	commit \| commitdiff \| tree
2010-11-03	Naama Menda	updated version for BCS required for Phenome	commit \| commitdiff \| tree
2010-11-01	Naama Menda	replaced find with create_with for accession cvterm	commit \| commitdiff \| tree
2010-10-29	Naama Menda	added stock_dbxrefprop table to db patch.	commit \| commitdiff \| tree
2010-10-29	Naama Menda	forgot to use Try::Tiny	commit \| commitdiff \| tree
2010-10-29	Naama Menda	typo	commit \| commitdiff \| tree
2010-10-29	Naama Menda	fixed population update function.	commit \| commitdiff \| tree
2010-10-28	Naama Menda	db patches should work right now, with loading stock_id...	commit \| commitdiff \| tree
2010-10-28	Naama Menda	forgeot to get rid of STDERR printing	commit \| commitdiff \| tree
2010-10-28	Naama Menda	added db_pathces required to Build.PL	commit \| commitdiff \| tree
2010-10-28	Naama Menda	applies changes to ND schema	commit \| commitdiff \| tree
2010-10-28	Naama Menda	db patch moved from sgn/topic/solcap_marker	commit \| commitdiff \| tree
2010-10-28	Naama Menda	solcap TA loading script also needs to store 1 experiment...	commit \| commitdiff \| tree
2010-10-28	Naama Menda	added genotype experiments ,and linking the stock ...	commit \| commitdiff \| tree
2010-10-28	Naama Menda	added accessors for stock_id . Need to run AddStockLInks...	commit \| commitdiff \| tree
2010-10-28	Naama Menda	added function for finding genotype regions per genotype	commit \| commitdiff \| tree
2010-10-28	Naama Menda	db patch for adding stock_id rows to individual, phenotype...	commit \| commitdiff \| tree
2010-10-28	Naama Menda	db patch for adding a stock_id field for tables about...	commit \| commitdiff \| tree
2010-10-28	Naama Menda	removed emacs backup file	commit \| commitdiff \| tree
2010-10-26	Naama Menda	solcap loading script should load one experiment per run	commit \| commitdiff \| tree
2010-10-26	Naama Menda	solcap data should load with one nd_experiment per run	commit \| commitdiff \| tree
2010-10-26	Naama Menda	added txn_rollback when 'try' fails. Doesn't see to...	commit \| commitdiff \| tree
2010-10-26	Naama Menda	added the allele_phenotype field to the locus/allele...	commit \| commitdiff \| tree
2010-10-26	Naama Menda	found a bug with storing phenotypes. Need to update...	commit \| commitdiff \| tree
2010-10-25	Naama Menda	fixed db patch for phenome data migration into chado...	commit \| commitdiff \| tree
2010-10-23	Naama Menda	patch for migrating phenome individual and population...	commit \| commitdiff \| tree
2010-10-23	Naama Menda	got rid of dbh checking in constructor	commit \| commitdiff \| tree
2010-10-23	Naama Menda	fixed POD	commit \| commitdiff \| tree
2010-10-23	Naama Menda	got rid of checking dbh in constructor, and added a...	commit \| commitdiff \| tree
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Scripts and libraries for managing the SGN Phenome database

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