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remove version number from locus id for creating links to the locus page using the...
2014-06-13
N
aa
m
a Menda
remove version number
from
locus i
d
for
creati
n
g li
n
ks
.
.
.
commit
|
commitdiff
|
tree
2014-03-14
Naama Menda
cor
r
ect documentation f
o
r sto
r
ing
terms
w
ith a months
.
.
.
commit
|
commitdiff
|
tree
2014-01-21
Naama Men
d
a
fix documenta
t
ion for loading snp files
commit
|
commitdiff
|
tree
2013-07-18
n
menda
e
x
clude
o
b
s
o
l
ete ann
o
tations by looking at locus
_
dbxref_ev
i
d
ence
commit
|
commitdiff
|
tree
2013-07-17
nmenda
refine error
m
essag
e
s
commit
|
commitdiff
|
tree
2013-06-25
Naama Menda
root term for
p
lant
_
anatom
y
has changed since we last
.
.
.
commit
|
commitdiff
|
tree
2013-06-24
N
a
a
ma Menda
not a good ide
a
t
o au
t
omat
i
cally update obs
o
lete terms
.
.
.
commit
|
commitdiff
|
tree
2013-06-24
N
a
ama
Menda
updated c
o
de
for f
l
ag
g
i
ng obso
l
ete an
n
otat
i
ons, since
.
.
.
commit
|
commitdiff
|
tree
2013-06-16
Naam
a
Menda
p
r
int
debugging i
n
fo when pa
r
ents are stored
commit
|
commitdiff
|
tree
2013-06-16
N
a
a
ma Menda
cleaning c
l
one
na
m
e
s in the
loading
scr
i
pt
commit
|
commitdiff
|
tree
2013-06-14
nmenda
f
i
x for
s
tocks w
i
th a
bac
k
slash in
their name
commit
|
commitdiff
|
tree
2013-06-14
nmenda
change male/fem
a
l
e parents to be the
s
u
bj
e
cts , to
.
.
.
commit
|
commitdiff
|
tree
2013-06-09
N
a
ama Men
d
a
remov
e
leading and
trailing spaces fr
o
m all
locus searhc
.
.
.
commit
|
commitdiff
|
tree
2013-05-13
nmenda
add plot name to s
t
ock uniquename
commit
|
commitdiff
|
tree
2013-05-07
nmenda
typo
commit
|
commitdiff
|
tree
2013-05-07
nmenda
fixed
u
pdate q
u
er
y
for stock_relati
o
nship when merging
.
.
.
commit
|
commitdiff
|
tree
2013-04-25
nmenda
ad
d
y
ear project
p
ro
p
for mul
t
ilocatio
n
files
commit
|
commitdiff
|
tree
2013-04-13
Naama Menda
debug i
n
fo about loading of plo
t
st
o
cks
commit
|
commitdiff
|
tree
2013-04-13
Naama Menda
a
dd
projec
t
n
a
m
e
and year
optio
n
s
commit
|
commitdiff
|
tree
2013-04-13
Naama
M
end
a
s
n
p
loa
d
er creates
n
ow new stoc
k
s
if not
f
ound in d
b
commit
|
commitdiff
|
tree
2013-04-12
Naama Menda
add code fr
o
m
merge
commit
|
commitdiff
|
tree
2013-04-12
Naa
m
a Menda
res
o
l
v
ed
c
o
nfl
i
ct
commit
|
commitdiff
|
tree
2013-04-19
nmenda
add
m
ore props to phenotype d
a
t
a
commit
|
commitdiff
|
tree
2013-04-18
n
mend
a
f
i
x s
e
a
rch qu
e
r
y
commit
|
commitdiff
|
tree
2013-04-12
Naam
a
Mend
a
support
for mu
l
tilo
c
atio
n
file
s
commit
|
commitdiff
|
tree
2013-04-07
N
a
a
ma Menda
refin
i
ng c
l
one nam
e
search
commit
|
commitdiff
|
tree
2013-04-07
N
aama
Menda
skipping n
o
n
-
numeric values
commit
|
commitdiff
|
tree
2013-04-07
Naama M
e
nd
a
change surviving
p
lants co
l
umn
h
eader
commit
|
commitdiff
|
tree
2013-04-17
nmenda
fixed errors
commit
|
commitdiff
|
tree
2013-04-06
Naama Men
d
a
loader based on NRCRI d
a
ta
.
Should wo
r
k with other
.
.
.
commit
|
commitdiff
|
tree
2013-04-06
Naama M
e
nda
typo
commit
|
commitdiff
|
tree
2013-04-06
Naama Menda
merged changes
commit
|
commitdiff
|
tree
2013-04-06
N
a
ama Menda
l
o
ader for c
a
ssav
a
pro
j
ects
and their met
a
dat
a
commit
|
commitdiff
|
tree
2013-04-08
nmenda
cassa
v
a clo
n
e l
o
a
der finished
commit
|
commitdiff
|
tree
2013-04-08
n
menda
force u
s
ing provi
d
ed marker na
m
e without cleani
n
g
commit
|
commitdiff
|
tree
2013-03-30
N
aama Men
d
a
loader for cas
s
ava clones and s
y
n
ony
m
s
commit
|
commitdiff
|
tree
2013-03-28
Na
a
ma Menda
refi
n
ed options for
lo
a
ding solcap data
commit
|
commitdiff
|
tree
2012-11-29
Naama Mend
a
pri
n
t shorter
m
ini-ref
commit
|
commitdiff
|
tree
2012-11-29
N
aama
Menda
re
f
e
rence_id
i
n locus
g
roup
_
m
ember is a
d
bx
r
e
f
commit
|
commitdiff
|
tree
2012-11-28
Naama
Menda
cxgn members returns
a
data struc
t
ure with the
l
o
cus
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama Mend
a
function for return
i
ng the
se
c
ond lev
e
l
object
of locus
g
roup
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naa
m
a
Menda
optio
n
for passing locusgro
u
p_na
m
e
as an
arg for c
h
ecking
.
.
.
commit
|
commitdiff
|
tree
2012-11-08
nm
e
nda
fi
x
capit
a
lizat
i
on
commit
|
commitdiff
|
tree
2012-11-05
N
aama
M
enda
tgrc wil
d
accession
s
commit
|
commitdiff
|
tree
2012-11-05
Naama Menda
loa
d
e
r
for tgrc wi
l
d a
c
cessions
commit
|
commitdiff
|
tree
2012-11-06
nmenda
correct numeric chrom
o
some number
commit
|
commitdiff
|
tree
2012-11-06
nm
e
n
d
a
loader for
u
p
d
ating unig
e
nes linke
d
t
o
loci based on
.
.
.
commit
|
commitdiff
|
tree
2012-11-06
nme
n
da
option to read
f
i
le names from
s
pread
s
heet
commit
|
commitdiff
|
tree
2012-11-06
nmenda
f
ilter
obso
l
ete
l
oci when fetchi
n
g by g
e
nome_lo
c
us i
d
commit
|
commitdiff
|
tree
2012-11-04
Naama Menda
cassava and barley loaders
commit
|
commitdiff
|
tree
2012-11-03
Naama Menda
Merge b
r
anch 'master
'
o
f
gi
t
hub
.
com:
s
olgen
o
m
i
cs/Phenom
e
commit
|
commitdiff
|
tree
2012-11-03
Naama Mend
a
corr
e
ct tab-deli
m
ite
d
format
commit
|
commitdiff
|
tree
2012-11-01
nmen
d
a
corre
c
t usern
a
me for Tom
a
toma db
commit
|
commitdiff
|
tree
2012-10-31
Naama Menda
populatio
n
should
be for muta
t
n
s
commit
|
commitdiff
|
tree
2012-10-31
N
aama M
e
nda
l
o
ader for the
T
s
u
kuba m
u
t
ants
commit
|
commitdiff
|
tree
2012-10-04
Naama Men
d
a
tweak scale cvtermprop loading script
commit
|
commitdiff
|
tree
2012-07-19
nmenda
typo
commit
|
commitdiff
|
tree
2012-07-19
nmenda
loader for cass
a
va SNP d
a
ta
commit
|
commitdiff
|
tree
2012-05-02
Na
a
ma
Men
d
a
add updating of gen
o
m
e locus identifier, description
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
N
a
ama
M
end
a
a
dd
a
us
e
r name
o
p
tion
commit
|
commitdiff
|
tree
2012-04-18
Naa
m
a
M
en
d
a
typo
commit
|
commitdiff
|
tree
2012-04-18
Naama Menda
added
a
check
f
or stock_owner
r
ow
commit
|
commitdiff
|
tree
2012-04-17
N
a
a
m
a
M
e
nda
correcte
d
loader for
cassava phe
n
otyping projects
commit
|
commitdiff
|
tree
2012-04-17
Naama Menda
corrected
loader for cass
a
va phenotyping projects
commit
|
commitdiff
|
tree
2012-03-15
N
aama Menda
error i
n
fetching dbxref acce
s
sion
for a
p
u
b obje
c
t
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
modi
f
ied on
t
olo
g
y asso
c
i
ation script
t
o work
with s
t
ocks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Naama Men
d
a
updated
dum
p
script
.
Make thi
s
a
c
r
o
n
j
ob
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naama M
e
nda
remov
i
ng version numbers
f
rom Solyc gene ids
commit
|
commitdiff
|
tree
2012-01-09
N
a
ama Menda
moved the
g
enotype jso
n
to genotyeppr
o
p
commit
|
commitdiff
|
tree
2012-01-06
Naama Mend
a
script for reload
i
n
g th
e
solcap
s
np
positions as desi
g
nate
d
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Na
a
m
a Menda
lo
a
der for solcap Infin
i
um array snp geno
t
ype
s
commit
|
commitdiff
|
tree
2011-12-20
Naama Mend
a
fixed t
y
po
s
commit
|
commitdiff
|
tree
2011-12-18
Naa
m
a M
e
nda
lo
a
der f
o
r the
c
a
ssava phenoty
p
es
commit
|
commitdiff
|
tree
2011-12-17
Naama Menda
silly
typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Men
d
a
p
ol
i
shing script for
in
s
erting/updating potato lo
c
i
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naam
a
Menda
loa
d
er for the potato g
e
nome loci
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
printing to a
l
arge sequence file
commit
|
commitdiff
|
tree
2011-12-14
Naama Menda
fixed fetching of Solyc m
r
na se
q
uences
commit
|
commitdiff
|
tree
2011-12-14
N
aama Menda
ad
d
ing ita
g
m
r
na
s
equenc
e
s to
l
oci bl
a
st db
commit
|
commitdiff
|
tree
2011-11-23
Naama
M
e
nda
fixed cv
t
erm
name for pl
o
t and
m
ember stock relati
o
n
s
hip
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Naa
m
a Men
d
a
capit
a
lizing
Q
ual
i
ty term
commit
|
commitdiff
|
tree
2011-11-22
Naama Men
d
a
refining a
d
d_unigene method
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
M
e
rge branch 'ma
s
ter' into topic/locus_con
t
roller
commit
|
commitdiff
|
tree
2011-11-16
Naama Men
d
a
mi
s
sing
b
in
d
value
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
added locus field to the s
e
a
rch
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
adding disc
o
n
n
e
ct for
dbh wi
t
hout autocommi
t
commit
|
commitdiff
|
tree
2011-11-08
Naama
Menda
update D
B
Ix::
C
l
a
ss phen
o
m
e
schema classes
commit
|
commitdiff
|
tree
2011-11-07
Naama
M
enda
M
e
rge branch
'
m
a
st
e
r
'
int
o
t
o
p
ic
/
locus_
c
ontroller
commit
|
commitdiff
|
tree
2011-11-07
Naama Men
d
a
resolved con
f
lic
t
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
added ac
c
essors f
o
r genome_lo
c
us name field
commit
|
commitdiff
|
tree
2011-11-09
Naam
a
M
e
nda
di
s
abling
autoco
m
mit
commit
|
commitdiff
|
tree
2011-11-07
Naama
Menda
p
at
c
h for adding a
locus field to the lo
c
us t
a
ble
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama
M
end
a
a
d
din
g
phenotype props to s
o
lcap phenotype
s
commit
|
commitdiff
|
tree
2011-10-30
Naam
a
M
enda
u
sing
dbc->d
b
h instea
d
of CXGM::D
B
::Conne
c
tion
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obsoletin
g
l
ocus alias if the ITAG id is just the alias
commit
|
commitdiff
|
tree
2011-10-15
Naama
M
e
n
d
a
script fo
r
obsol
e
ting ITAG loci from phenom
e
.
locus
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
removing trailing spa
c
es fr
o
m unit name
commit
|
commitdiff
|
tree
2011-10-15
Naama
M
end
a
removing trailing s
p
acesfromunit n
a
me
commit
|
commitdiff
|
tree
2011-10-14
Naama Menda
fixi
n
g
b
ug in merge_locus fu
n
ction when merged locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
making sure
pla
n
t hait
t
erms are
f
ound
commit
|
commitdiff
|
tree
next