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remove version number from locus id for creating links to the locus page using the...
2014-06-13
Naama Menda
remove ve
r
sio
n
number from locus id
for creating l
i
nks
.
.
.
commit
|
commitdiff
|
tree
2014-03-14
Naama Mend
a
co
r
rec
t
documentat
i
on fo
r
storing terms with a
m
o
nth
s
.
.
.
commit
|
commitdiff
|
tree
2014-01-21
Naama Menda
fix
d
o
cument
a
tion for
l
oadi
n
g snp fi
l
es
commit
|
commitdiff
|
tree
2013-06-25
Naama Menda
root te
r
m
for p
l
a
n
t_anatomy has
changed since we l
a
s
t
.
.
.
commit
|
commitdiff
|
tree
2013-06-24
Na
a
ma
M
enda
no
t
a good
i
dea to autom
a
tic
a
lly update obsolete
t
erms
.
.
.
commit
|
commitdiff
|
tree
2013-06-24
N
a
a
ma Menda
updated c
o
de for flagging obsolete annotatio
n
s, since
.
.
.
commit
|
commitdiff
|
tree
2013-06-16
Na
a
ma
Menda
p
rint
d
eb
u
ggin
g
inf
o
when parents are st
o
red
commit
|
commitdiff
|
tree
2013-06-16
N
aama Menda
cleaning cl
o
ne
n
a
mes
i
n
t
he loading script
commit
|
commitdiff
|
tree
2013-06-09
Naama
M
enda
remove leading and trailing spa
c
es
from all locu
s
se
a
rhc
.
.
.
commit
|
commitdiff
|
tree
2013-04-13
Naama Menda
d
e
bug inf
o
a
bout
loading
o
f plot stoc
k
s
commit
|
commitdiff
|
tree
2013-04-13
Naama Me
n
da
add
project name and
y
ear options
commit
|
commitdiff
|
tree
2013-04-13
Naa
m
a
Menda
snp loader create
s
now new stock
s
i
f
not fo
u
nd
in db
commit
|
commitdiff
|
tree
2013-04-12
Naama
M
enda
a
dd
c
o
de from me
r
ge
commit
|
commitdiff
|
tree
2013-04-12
Naam
a
Menda
resol
v
ed
c
onflict
commit
|
commitdiff
|
tree
2013-04-12
N
a
ama M
e
nda
support
f
or mu
l
til
o
cation files
commit
|
commitdiff
|
tree
2013-04-07
N
a
ama Men
d
a
refining clone
n
a
me search
commit
|
commitdiff
|
tree
2013-04-07
N
a
ama Menda
skipping non-
n
umer
i
c v
a
lues
commit
|
commitdiff
|
tree
2013-04-07
N
aam
a
Menda
c
hange survi
v
i
n
g plants column header
commit
|
commitdiff
|
tree
2013-04-06
Naama Menda
lo
a
der based on NRCRI da
t
a
.
Should work with other
.
.
.
commit
|
commitdiff
|
tree
2013-04-06
Naam
a
M
e
nda
t
y
po
commit
|
commitdiff
|
tree
2013-04-06
Naam
a
Menda
merged changes
commit
|
commitdiff
|
tree
2013-04-06
Naama Menda
loader for
c
assava pro
j
ects a
n
d their met
a
d
a
ta
commit
|
commitdiff
|
tree
2013-03-30
Naama Menda
l
o
ader for cassava
clones
a
n
d
synonyms
commit
|
commitdiff
|
tree
2013-03-28
Naama Menda
r
ef
i
ned opti
o
ns for loading sol
c
ap d
a
t
a
commit
|
commitdiff
|
tree
2012-11-29
N
a
ama Me
n
da
p
rint sh
o
r
t
er mini-ref
commit
|
commitdiff
|
tree
2012-11-29
Naama
M
e
n
da
reference_id
i
n
l
ocusgroup_m
e
mber is
a dbxref
commit
|
commitdiff
|
tree
2012-11-28
Naama Mend
a
cxgn member
s
r
e
tu
r
ns a
d
ata
s
tructure wi
t
h
the locus
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama Menda
funct
i
on for re
t
urni
n
g
the secon
d
level object of locusgroup
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama Menda
option for p
a
ssing lo
c
usgroup_
n
ame as an arg
f
o
r checking
.
.
.
commit
|
commitdiff
|
tree
2012-11-05
Naam
a
Menda
t
g
rc wild accessi
o
ns
commit
|
commitdiff
|
tree
2012-11-05
Naama M
e
nda
loader fo
r
t
g
rc wild access
i
o
n
s
commit
|
commitdiff
|
tree
2012-11-04
Naama Menda
cassava and
b
arley loade
r
s
commit
|
commitdiff
|
tree
2012-11-03
Naam
a
Menda
Merge
b
ranch 'master' of g
i
thub
.
com:
s
o
lg
e
no
m
ics/Ph
e
nome
commit
|
commitdiff
|
tree
2012-11-03
Naama Menda
c
orrec
t
tab-delimited format
commit
|
commitdiff
|
tree
2012-10-31
Naama Men
d
a
population sh
o
uld be for mutatns
commit
|
commitdiff
|
tree
2012-10-31
Naama Menda
loader for the Tsu
k
uba mu
t
an
t
s
commit
|
commitdiff
|
tree
2012-10-04
Naama Menda
tweak s
c
ale cvtermprop loadi
n
g s
c
r
i
pt
commit
|
commitdiff
|
tree
2012-05-02
Na
a
ma Me
n
da
add upda
t
ing of geno
m
e lo
c
us identifie
r
, descrip
t
ion
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
Naama Menda
a
d
d a user
n
ame optio
n
commit
|
commitdiff
|
tree
2012-04-18
Naama Menda
typo
commit
|
commitdiff
|
tree
2012-04-18
Naa
m
a M
e
n
da
added a check for stock_owner row
commit
|
commitdiff
|
tree
2012-04-17
Naama Menda
corrected loader
for
cass
a
va phenotypi
n
g pr
o
j
ects
commit
|
commitdiff
|
tree
2012-04-17
Naama Men
d
a
c
orre
c
t
e
d
loader for cassava
p
hen
o
ty
p
i
n
g projects
commit
|
commitdiff
|
tree
2012-03-15
Na
a
ma
M
enda
error i
n
f
etching d
b
xref
a
cce
s
s
ion
for a pub
o
bje
c
t
commit
|
commitdiff
|
tree
2012-03-15
N
a
a
ma
M
en
d
a
modified ontology
a
ss
o
ciation sc
r
ipt
t
o work with stock
s
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
N
a
ama Men
d
a
updated dump script
.
M
ak
e
t
h
is
a
cron job
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naam
a
Me
n
da
removing version nu
m
bers from S
o
l
y
c gene ids
commit
|
commitdiff
|
tree
2012-01-09
Naama Menda
moved the genotype
j
son to genotyepp
r
op
commit
|
commitdiff
|
tree
2012-01-06
Naama Men
d
a
s
c
r
i
pt for reloa
d
ing t
h
e solcap snp
pos
i
tions a
s
d
esignated
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Naa
m
a Menda
loader for
solca
p
Infi
n
ium array
s
np genot
y
p
e
s
commit
|
commitdiff
|
tree
2011-12-20
Naama Menda
fixed typos
commit
|
commitdiff
|
tree
2011-12-18
N
aama
Menda
l
o
a
der for the c
a
ssava phenotypes
commit
|
commitdiff
|
tree
2011-12-17
N
a
ama Men
d
a
si
l
ly typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
polish
i
n
g
script for inserting/upda
t
ing potato loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Na
a
ma M
e
nda
l
oader for
t
he potato genome loci
commit
|
commitdiff
|
tree
2011-12-15
N
aama Menda
printing to a large sequence file
commit
|
commitdiff
|
tree
2011-12-14
Naama Menda
fixed fetc
h
i
ng of Solyc mrna sequences
commit
|
commitdiff
|
tree
2011-12-14
Naama
M
en
d
a
a
dding i
t
ag mrn
a
sequences to loci blast db
commit
|
commitdiff
|
tree
2011-11-23
Na
a
ma M
e
nda
f
ixed cvterm
n
a
me for plot and member stock relationship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
N
a
ama Men
d
a
c
a
pitalizing Quality term
commit
|
commitdiff
|
tree
2011-11-22
N
a
am
a
Menda
r
e
f
ining add_unigen
e
method
commit
|
commitdiff
|
tree
2011-11-16
Na
a
m
a
Menda
Me
r
ge
branc
h
'master' i
n
to topic/locus_c
o
nt
r
oller
commit
|
commitdiff
|
tree
2011-11-16
N
a
ama M
e
nda
missing b
i
nd
value
commit
|
commitdiff
|
tree
2011-11-15
Naama
Menda
a
d
ded locus field t
o
t
he search
commit
|
commitdiff
|
tree
2011-11-15
Naa
m
a Menda
a
d
d
i
n
g
d
i
s
c
onnect for dbh
witho
u
t autoco
m
m
it
commit
|
commitdiff
|
tree
2011-11-08
N
a
ama Menda
u
pda
t
e DBIx::Cl
a
ss pheno
m
e schema cl
a
sses
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
M
e
rg
e
branc
h
'm
a
st
e
r
' i
n
to topic/l
o
cus
_
con
t
rol
l
er
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
r
e
solved conflic
t
commit
|
commitdiff
|
tree
2011-11-07
N
aama
M
en
d
a
added access
o
rs
f
or
g
enome_locus name
f
iel
d
commit
|
commitdiff
|
tree
2011-11-09
Naama Men
d
a
disabling
autocommit
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
patch for adding a locus field to the locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Men
d
a
adding
p
henotype props to
s
olcap
ph
e
noty
p
es
commit
|
commitdiff
|
tree
2011-10-30
Naama
M
enda
using dbc
-
>db
h
inst
e
ad of CX
G
M::DB::Connectio
n
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obsoleting locus alias if the ITAG
i
d
i
s
j
u
st the ali
a
s
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
script for
o
b
solet
i
ng I
T
AG loci from phen
o
me
.
locus
commit
|
commitdiff
|
tree
2011-10-15
Naama Men
d
a
remo
v
ing traili
n
g s
p
aces from
unit name
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
re
m
o
ving tra
i
ling spa
c
esf
r
omunit
n
ame
commit
|
commitdiff
|
tree
2011-10-14
Naama Mend
a
fixing bug in merge_locus function when merged loc
u
s
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
m
a
king sure plant hai
t
te
r
ms are fo
u
nd
commit
|
commitdiff
|
tree
2011-10-12
Naam
a
M
enda
l
ooking at direct child ter
m
s for qualitative
t
erms
commit
|
commitdiff
|
tree
2011-10-11
Naama Me
n
da
loading qualitative terms
correctly
commit
|
commitdiff
|
tree
2011-10-11
Naama
Menda
a
d
d
ing unit ontology cvterms to the ph
e
notyeps
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
j
u
s
t w
a
rning if parent stock is not
found
commit
|
commitdiff
|
tree
2011-10-03
Naam
a
Menda
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama
M
e
nda
parsing mor
e
options for sol
c
ap image files
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
f
i
nd
t
he year o
f
t
he proect from
t
he metadata file
commit
|
commitdiff
|
tree
2011-10-02
N
a
ama Menda
y
ea
r
should be a p
r
operty of the pr
o
je
c
t
commit
|
commitdiff
|
tree
2011-10-02
Naama Mend
a
searcg is better
t
h
a
n find here
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
ty
p
o
commit
|
commitdiff
|
tree
2011-09-27
Naama
Menda
s
k
ipping
f
or non
-
existing p
l
ot
s
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
chec
k
in
g
correc
t
ly if an image is l
o
a
ded an
d
if wa
s
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
better printing of error messages
commit
|
commitdiff
|
tree
2011-09-27
Naama M
e
nda
a
d
ded a check for exist
i
ng stock-image links
commit
|
commitdiff
|
tree
2011-09-23
Naama
Menda
las
t
typ
o
?
commit
|
commitdiff
|
tree
2011-09-23
Na
a
ma Mend
a
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
N
a
ama Men
d
a
added exception for planting date prope
r
ty
commit
|
commitdiff
|
tree
2011-09-23
Naa
m
a Menda
a
d
d
e
d
y
e
ar option for
finding unique p
l
ot
n
ames
commit
|
commitdiff
|
tree
2011-09-18
Na
a
ma Menda
setting the tr
a
nsaction properly
commit
|
commitdiff
|
tree
next