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added a check for stock_owner row
2012-04-18
N
aama Menda
adde
d
a
chec
k
for s
t
ock_owner
r
ow
commit
|
commitdiff
|
tree
2012-04-17
Naa
m
a
Menda
corrected loader
f
o
r cassava
phenotyping projec
t
s
commit
|
commitdiff
|
tree
2012-04-17
Naa
m
a Men
d
a
corrected loader for cass
a
va
p
henotyp
i
ng proj
e
cts
commit
|
commitdiff
|
tree
2012-03-15
Naama Mend
a
e
rro
r
in
fetching
dbxref
acces
s
ion for
a pub object
commit
|
commitdiff
|
tree
2012-03-15
Naama Mend
a
modifi
e
d o
n
tology assoc
i
ation
script to work wit
h
sto
c
ks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Naama Menda
updated dump script
.
Make
this a
c
ro
n
job
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naama Menda
r
e
moving version numbers from
S
ol
y
c gene ids
commit
|
commitdiff
|
tree
2012-01-09
Naama Menda
mov
e
d the genotype js
o
n to genot
y
e
p
prop
commit
|
commitdiff
|
tree
2012-01-06
Naam
a
M
enda
scrip
t
for
r
e
loadin
g
the
s
olcap
snp
p
o
siti
o
n
s
as
d
esignated
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
N
a
a
m
a
M
enda
loader fo
r
s
o
lcap
I
nfinium array snp ge
n
otyp
e
s
commit
|
commitdiff
|
tree
2011-12-20
Naama Menda
fix
e
d typos
commit
|
commitdiff
|
tree
2011-12-18
N
aama
M
enda
loa
d
er for th
e
ca
s
sava phenotyp
e
s
commit
|
commitdiff
|
tree
2011-12-17
Naama
M
enda
s
illy typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
p
o
lis
h
ing
script for insert
i
ng/updating potato loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama Mend
a
loader for the pot
a
t
o
g
enom
e
loci
commit
|
commitdiff
|
tree
2011-12-15
Naama M
e
nda
printing
t
o a large
seque
n
c
e
fil
e
commit
|
commitdiff
|
tree
2011-12-14
Naama Menda
fixe
d
fe
t
c
hing of Solyc mrna sequ
e
nces
commit
|
commitdiff
|
tree
2011-12-14
Na
a
m
a Men
d
a
adding ita
g
mrna seq
u
en
c
es t
o
l
oci b
l
a
s
t db
commit
|
commitdiff
|
tree
2011-11-23
Naama Menda
fixed cvterm
n
ame for plot and member st
o
ck rela
t
ions
h
ip
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Naama Men
d
a
cap
i
t
al
i
z
ing Qu
a
l
i
ty term
commit
|
commitdiff
|
tree
2011-11-22
N
a
a
ma
M
enda
refining add_unigene me
t
hod
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
Merge br
a
nch 'master' into topic/locus_
c
o
n
troller
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
missing bind value
commit
|
commitdiff
|
tree
2011-11-15
Naa
m
a Me
n
da
a
dded
l
o
c
u
s field to t
h
e search
commit
|
commitdiff
|
tree
2011-11-15
N
aama
Menda
adding disconnect
for dbh wi
t
hout autocommit
commit
|
commitdiff
|
tree
2011-11-08
Na
a
ma Menda
update
D
B
Ix::Class phenome
s
chema class
e
s
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
Mer
g
e branch 'master' into topi
c
/lo
c
us_c
o
ntroller
commit
|
commitdiff
|
tree
2011-11-07
Naama M
e
n
d
a
resolved confl
i
ct
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
add
e
d
a
ccessors for genome_locus
name fiel
d
commit
|
commitdiff
|
tree
2011-11-09
N
aama Menda
d
i
s
a
blin
g
au
t
o
c
ommit
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
p
a
tch for
a
ddin
g
a locus field to the locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama
Menda
ad
d
ing phenotype props to solcap phenot
y
pes
commit
|
commitdiff
|
tree
2011-10-30
Naama Menda
using dbc->
d
bh instea
d
of CXGM::DB::Connection
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obs
o
leting locus alias if the ITAG
i
d
is just the al
i
as
commit
|
commitdiff
|
tree
2011-10-15
Naama Me
n
da
script for o
b
soleting ITAG l
o
ci
from
p
henom
e
.
l
ocus
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
remov
i
ng trailing s
p
a
c
es from unit
name
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
re
m
o
vi
n
g trailing spacesfromunit name
commit
|
commitdiff
|
tree
2011-10-14
Naama M
e
nda
f
i
xing
b
ug in m
e
rge_locus function when
merged
locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama Mend
a
maki
n
g su
r
e
p
lant
h
a
it
t
erms are found
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
looking
at
d
ir
e
ct ch
i
l
d t
e
rms for qualitative ter
m
s
commit
|
commitdiff
|
tree
2011-10-11
Naama Men
d
a
loading qualitative terms corr
e
ctly
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma
Menda
a
d
ding unit ontology cvterms to the phenotyeps
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
j
ust
warn
i
ng if pare
n
t stock is
not found
commit
|
commitdiff
|
tree
2011-10-03
N
aama Menda
typo
commit
|
commitdiff
|
tree
2011-10-03
N
a
a
ma Me
n
d
a
parsi
n
g more opt
i
ons for solcap im
a
ge files
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
f
i
nd the year of th
e
proect from the met
a
d
a
t
a
file
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
year should be a
property of the project
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
searcg is better t
h
an find here
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
t
y
po
commit
|
commitdiff
|
tree
2011-09-27
Naa
m
a Menda
skipping
for non-existing plots
commit
|
commitdiff
|
tree
2011-09-27
N
a
a
ma Menda
checking
c
orrectly
i
f an image is l
o
aded and if was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama
M
enda
b
e
tter print
i
ng of e
r
ror me
s
sages
commit
|
commitdiff
|
tree
2011-09-27
Naama
Menda
added a
c
h
ec
k
for exi
s
tin
g
stock
-
image links
commit
|
commitdiff
|
tree
2011-09-23
Naama Mend
a
last
t
y
p
o
?
commit
|
commitdiff
|
tree
2011-09-23
Naama
Menda
typ
o
commit
|
commitdiff
|
tree
2011-09-23
Naama Mend
a
t
y
p
o
commit
|
commitdiff
|
tree
2011-09-23
N
a
a
m
a Menda
a
d
ded e
x
c
ep
t
i
on for planting date pr
o
perty
commit
|
commitdiff
|
tree
2011-09-23
Naama
Menda
a
dded year option for finding unique pl
o
t
n
ames
commit
|
commitdiff
|
tree
2011-09-18
Naama Menda
setti
n
g
the transaction properly
commit
|
commitdiff
|
tree
2011-09-18
Naama Mend
a
c
he
c
king if
a
synonym valu
e
was already lo
a
ded
commit
|
commitdiff
|
tree
2011-09-17
Naama Menda
loader for solcap images
commit
|
commitdiff
|
tree
2011-09-17
Naam
a
Menda
using txn_do for the tr
a
nsaction
commit
|
commitdiff
|
tree
2011-09-16
Naama Men
d
a
m
o
dified
o
p
ti
o
ns for loading solcap
T
A
d
ata
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
a
dded parsing
o
f qu
a
lita
t
ive traits into the tomato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naam
a
Menda
fix
e
d loading stock
owner into the r
i
ght place
commit
|
commitdiff
|
tree
2011-09-14
N
a
ama Menda
no need to cl
o
ne t
h
e
db
h
commit
|
commitdiff
|
tree
2011-09-14
N
aama Menda
added miss
i
n
g phenome DBIC classes
commit
|
commitdiff
|
tree
2011-09-14
N
a
ama
Mend
a
using CXGN
:
:
P
henome::Schema
f
or c
h
ecking/inserting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
removed o
u
tdated l
o
ading sc
r
ipt
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
updated s
c
ript for
l
oa
d
ing solcap accessio
n
s
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
upda
t
ed CXGN::
P
henome::
S
che
m
a
c
lass
e
s
commit
|
commitdiff
|
tree
2011-09-13
Naam
a
M
e
nda
t
y
p
o
commit
|
commitdiff
|
tree
2011-09-04
N
aama Men
d
a
loading script
f
or SolCAP potat
o
images
commit
|
commitdiff
|
tree
2011-09-02
Naama
M
enda
lode
r
for i
m
a
g
es from Sandy Knapp
commit
|
commitdiff
|
tree
2011-08-31
Naama Menda
ad
d
in
g
date
prop to experiments
commit
|
commitdiff
|
tree
2011-08-28
Naama
M
e
nda
load
i
ng script for pot
a
to
s
olcap dat
a
.
Hopefull
y
next
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
Naama Menda
l
o
ader f
o
r T
A
I
R
loci
commit
|
commitdiff
|
tree
2011-06-19
Naama Me
n
da
updated sol
c
a
p
stuff for reloadi
n
g
t
h
e
pota
t
o
2
009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
Naama Menda
patch
f
or
c
hanges in Chado
ND schem
a
commit
|
commitdiff
|
tree
2011-04-22
N
aam
a
Menda
db patch for granti
n
g delete on metad
a
ta to web
_
usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama
M
e
n
da
upd
a
te
d
DBIx classes ,
no more phenome
.
p
h
en
o
type tab
l
e
commit
|
commitdiff
|
tree
2011-04-18
Naama Mend
a
s
kipping
m
et
a
da
t
a insert i
f
one of
t
h
e
FKs is null
commit
|
commitdiff
|
tree
2011-04-17
Naama
Menda
add
i
ng web_usr permissions to m
e
tadata table
commit
|
commitdiff
|
tree
2011-04-17
N
aama Mend
a
typo in q
u
ery
commit
|
commitdiff
|
tree
2011-04-17
Naama Me
n
da
forgo
t
t
o
add w
e
b_usr
p
er
m
issions
commit
|
commitdiff
|
tree
2011-04-17
N
aama
M
enda
using
stock_allele and stock_image inst
e
a
d of sto
c
k
prop
commit
|
commitdiff
|
tree
2011-04-16
N
a
a
ma Me
n
d
a
db pa
t
ch for migrating
stock i
m
age, allele,
a
nd o
w
ner
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
N
aama Me
n
da
refactoring
functions that
use individ
u
a
l
s
.
Now we
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama
Menda
t
ypos
commit
|
commitdiff
|
tree
2011-04-01
Naama M
e
nda
de
l
eting fir
s
t e
x
isti
n
g al
l
el
e
links
commit
|
commitdiff
|
tree
2011-04-01
Naama M
e
nda
db patch f
o
r corre
c
t
ly stor
i
ng all alleles linked with
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
N
aama Menda
selecting all alleles,
i
nclu
d
ing defaults ones
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
rem
o
v
e
d
s
earch
i
ng loc
i
by stock phenotypes
.
To do this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naa
m
a Menda
added an
o
ption t
o
pass the image_path
.
th
i
s
l
ets
r
un
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
Naama Menda
forg
o
t to allow d
u
plicate
v
a
l
u
es
.
Withou
t
this mul
t
iple
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama
M
en
d
a
poli
s
hed loadi
n
g scrip
t
for lycoti
l
l images
commit
|
commitdiff
|
tree
2011-03-28
Naama Menda
loading script for
l
y
c
oti
l
l
accessions
commit
|
commitdiff
|
tree
2011-03-23
Naama M
e
n
d
a
dbpatch for fixi
n
g locus_marker FK
commit
|
commitdiff
|
tree
2011-03-22
Na
a
ma
Menda
a
d
ded an interim function
f
or getti
n
g
popula
t
ion
ob
j
ect
.
.
.
commit
|
commitdiff
|
tree
next