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tweak scale cvtermprop loading script
2012-10-04
N
aama Menda
t
w
e
a
k s
c
ale cvtermprop
l
oading s
c
r
ipt
commit
|
commitdiff
|
tree
2012-05-02
Naama Menda
a
d
d up
d
ating of
genome locus
i
dentifi
e
r,
descrip
t
i
on
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
Naama Menda
add a user nam
e
option
commit
|
commitdiff
|
tree
2012-04-18
Naa
m
a Menda
typo
commit
|
commitdiff
|
tree
2012-04-18
N
aama
Me
n
da
a
d
ded a check
f
o
r
s
t
ock_ow
n
e
r
ro
w
commit
|
commitdiff
|
tree
2012-04-17
Naa
m
a
Me
n
da
corrected loade
r
for cass
a
v
a phenot
y
ping projects
commit
|
commitdiff
|
tree
2012-04-17
Naama Menda
c
orr
e
cted loa
d
er for cassava phenot
y
ping
projects
commit
|
commitdiff
|
tree
2012-03-15
Naama M
e
nda
error in fetching dbxref accessio
n
for a pub object
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
modified ontology association script to work with st
o
cks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Naa
m
a Menda
updated dump
s
cript
.
Make th
i
s a cron job
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naam
a
M
e
nda
rem
o
ving version n
u
mber
s
from Solyc
g
en
e
ids
commit
|
commitdiff
|
tree
2012-01-09
N
aama
M
enda
moved the
g
en
o
type json to
g
enotyepp
r
op
commit
|
commitdiff
|
tree
2012-01-06
N
a
a
m
a
M
e
nda
script for
reloading
t
h
e
s
olcap sn
p
positions as
d
esignated
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Naama
Menda
l
oader for sol
c
ap Inf
i
n
ium array snp ge
n
o
types
commit
|
commitdiff
|
tree
2011-12-20
Na
a
ma Menda
fixed typos
commit
|
commitdiff
|
tree
2011-12-18
N
aama Menda
l
o
ader for the cassava phenotypes
commit
|
commitdiff
|
tree
2011-12-17
Naam
a
Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
polishing script f
o
r inserting/updatin
g
potato loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
loader
f
or the po
t
a
to geno
m
e loci
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
prin
t
ing to a larg
e
s
e
quence fi
l
e
commit
|
commitdiff
|
tree
2011-12-14
Naama
M
enda
fixed fetc
h
ing
o
f Solyc mrn
a
s
equences
commit
|
commitdiff
|
tree
2011-12-14
N
a
ama Menda
a
d
ding itag mrna sequ
e
n
ces to loci blast db
commit
|
commitdiff
|
tree
2011-11-23
Na
a
ma Menda
fixed cvterm
n
a
me f
o
r plot and
member s
t
ock relationship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
N
a
ama Menda
capita
l
izing Quality term
commit
|
commitdiff
|
tree
2011-11-22
Naama Men
d
a
refining add_unigene method
commit
|
commitdiff
|
tree
2011-11-16
Naama
Me
n
da
M
erge bra
n
c
h 'maste
r
' into topic
/
locus_contro
l
ler
commit
|
commitdiff
|
tree
2011-11-16
N
aama
M
e
n
da
mis
s
ing bind va
l
ue
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
adde
d
locus f
i
el
d
to th
e
sea
r
ch
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
adding
d
isco
n
nect for dbh w
i
thout a
u
tocommit
commit
|
commitdiff
|
tree
2011-11-08
Naama Menda
update DB
I
x::Class phenome schema classe
s
commit
|
commitdiff
|
tree
2011-11-07
Naama
Menda
Merge b
r
a
n
ch 'mas
t
er' in
t
o topic/locus_controller
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
r
esolved conf
l
i
c
t
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
adde
d
acces
s
o
r
s for genome_locus name fie
l
d
commit
|
commitdiff
|
tree
2011-11-09
Naama Menda
disablin
g
autocommit
commit
|
commitdiff
|
tree
2011-11-07
Naam
a
Menda
pat
c
h for adding a locus field to th
e
locus tab
l
e
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Me
n
da
adding phenotype props to solcap p
h
enotypes
commit
|
commitdiff
|
tree
2011-10-30
Naama Menda
using dbc->
d
bh
inst
e
ad o
f
C
XGM
:
:DB::Connection
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obsoleting locus ali
a
s if the ITAG id is
just the alia
s
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
s
cript fo
r
obsoleting ITAG loci from pheno
m
e
.
locus
commit
|
commitdiff
|
tree
2011-10-15
Naama
Menda
removing trail
i
n
g space
s
from unit
n
ame
commit
|
commitdiff
|
tree
2011-10-15
Naam
a
Menda
removing trailing spaces
f
romunit na
m
e
commit
|
commitdiff
|
tree
2011-10-14
Naam
a
Menda
fixing
b
ug
i
n merge_locus function when merged lo
c
us
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
m
aking sure plant
hait terms are found
commit
|
commitdiff
|
tree
2011-10-12
Na
a
ma Menda
looking at
di
r
ec
t
child terms
f
or qualitativ
e
terms
commit
|
commitdiff
|
tree
2011-10-11
Naama Mend
a
loading qualitativ
e
t
e
rms correc
t
ly
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma Menda
adding unit ontology cvterms
t
o the phenotyeps
commit
|
commitdiff
|
tree
2011-10-03
Naama
M
enda
ju
s
t
w
arning if parent sto
c
k
is not fou
n
d
commit
|
commitdiff
|
tree
2011-10-03
Naama
M
en
d
a
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
parsing more options for
s
olca
p
i
mage files
commit
|
commitdiff
|
tree
2011-10-02
N
aama
M
enda
find the year of the
p
r
o
ect fr
o
m the
metadata
f
ile
commit
|
commitdiff
|
tree
2011-10-02
Naama
M
enda
yea
r
should be a property of t
h
e
projec
t
commit
|
commitdiff
|
tree
2011-10-02
N
a
ama Me
n
da
searcg is better than
f
ind here
commit
|
commitdiff
|
tree
2011-09-27
Naa
m
a
M
enda
t
ypo
commit
|
commitdiff
|
tree
2011-09-27
Naama Mend
a
sk
i
ppi
n
g for non-
e
xis
t
ing plot
s
commit
|
commitdiff
|
tree
2011-09-27
Naa
m
a Menda
checking correctly if an im
a
g
e is loaded and if was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Me
n
da
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama M
e
nda
bette
r
printing of error messages
commit
|
commitdiff
|
tree
2011-09-27
Naama Mend
a
added a check for existin
g
stock
-
ima
g
e links
commit
|
commitdiff
|
tree
2011-09-23
Naam
a
Menda
l
a
st ty
p
o?
commit
|
commitdiff
|
tree
2011-09-23
Naam
a
M
e
n
da
t
y
p
o
commit
|
commitdiff
|
tree
2011-09-23
N
a
ama Men
d
a
ty
p
o
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
added exception
for
plantin
g
date property
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
added year option
for finding unique
p
lot names
commit
|
commitdiff
|
tree
2011-09-18
Na
a
ma
Menda
setting
the
t
ransact
i
on pr
o
pe
r
ly
commit
|
commitdiff
|
tree
2011-09-18
Naama M
e
nda
chec
k
ing if a sy
n
o
nym va
l
u
e
wa
s
alre
a
d
y
loaded
commit
|
commitdiff
|
tree
2011-09-17
N
a
ama Menda
loader
f
or solcap
i
mages
commit
|
commitdiff
|
tree
2011-09-17
Naama Menda
usin
g
txn_do f
o
r th
e
transa
c
tion
commit
|
commitdiff
|
tree
2011-09-16
N
a
ama Menda
modified
o
pti
o
ns for
l
oadi
n
g
so
l
cap TA
data
commit
|
commitdiff
|
tree
2011-09-16
Naam
a
Menda
adde
d
parsing of qual
i
tative trait
s
into the t
o
mato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama
Mend
a
fixed loading stock ow
n
er in
t
o
the right place
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
n
o need t
o
cl
o
ne the dbh
commit
|
commitdiff
|
tree
2011-09-14
N
a
a
ma Menda
added missing phenome DBIC class
e
s
commit
|
commitdiff
|
tree
2011-09-14
Naama Mend
a
usin
g
CXGN::Ph
e
nom
e
:
:
Sch
e
ma for
c
hecking/inserting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama
M
enda
re
m
ov
e
d outdat
e
d loading script
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
updated script for l
o
a
d
i
n
g
s
olcap accession
s
commit
|
commitdiff
|
tree
2011-09-14
Naam
a
Me
n
da
update
d
CXGN::Phen
o
me::
S
c
h
ema cl
a
s
s
es
commit
|
commitdiff
|
tree
2011-09-13
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-04
Naama Menda
loading scrip
t
for SolCAP p
o
t
a
to images
commit
|
commitdiff
|
tree
2011-09-02
Naama Me
n
da
loder for ima
g
es from Sandy
K
n
a
pp
commit
|
commitdiff
|
tree
2011-08-31
Naama
M
e
n
da
adding date prop to
e
xperi
m
e
n
t
s
commit
|
commitdiff
|
tree
2011-08-28
Na
a
ma Menda
l
o
adi
n
g scr
i
p
t for p
o
t
a
to solcap data
.
Hopefully next
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
Naama Menda
loader
for T
A
IR loci
commit
|
commitdiff
|
tree
2011-06-19
Naama Menda
updated solcap
s
tuff for
re
l
oading the pota
t
o 2009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
Naama Menda
p
a
tch
for c
h
ang
e
s in
C
hado ND schema
commit
|
commitdiff
|
tree
2011-04-22
Na
a
ma Menda
db p
a
tch fo
r
granting delete
o
n metadata t
o
web_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama
M
enda
u
pdated D
B
Ix classe
s
, no more
phenome
.
phenotype table
commit
|
commitdiff
|
tree
2011-04-18
Naama M
e
nda
skippi
n
g metadata insert if
o
ne o
f
the FKs is n
u
ll
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
a
dding web_usr perm
i
ssions to metadata table
commit
|
commitdiff
|
tree
2011-04-17
N
a
ama Men
d
a
typo
in query
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
forgot to add web_
u
sr permiss
i
o
ns
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
usin
g
stock
_
allel
e
and st
o
ck_image ins
t
e
a
d
of stockprop
commit
|
commitdiff
|
tree
2011-04-16
N
a
ama Menda
db patc
h
f
o
r
migrating stock i
m
age, allele,
a
nd owner
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama Mend
a
r
e
f
actoring
functions that use individuals
.
Now
w
e
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama
Menda
typo
s
commit
|
commitdiff
|
tree
2011-04-01
Na
a
ma Menda
del
e
ting
first exi
s
ting a
l
l
e
le links
commit
|
commitdiff
|
tree
2011-04-01
Na
a
ma Mend
a
db patch for correctly storing all alleles l
i
n
k
ed wi
t
h
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Na
a
ma Menda
selecti
n
g all
a
lleles, incl
u
di
n
g defaults ones
commit
|
commitdiff
|
tree
2011-04-01
N
aama Menda
re
m
oved searchi
n
g loc
i
b
y stock
p
henotypes
.
To do this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama Menda
added a
n
option to pass the
i
m
ag
e
_path
.
thi
s
l
e
ts run
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
Naama Me
n
da
forgot to
a
llow duplicate
v
a
lues
.
Wi
t
ho
u
t this m
u
ltiple
.
.
.
commit
|
commitdiff
|
tree
next