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print debugging info when parents are stored
2013-06-16
Naama Menda
print debugging info
w
h
en pare
n
ts a
r
e stored
commit
|
commitdiff
|
tree
2013-06-16
Naama Menda
cleaning clone names
in the
loading script
commit
|
commitdiff
|
tree
2013-06-14
nmenda
f
ix for stocks with a
backslash i
n
t
h
eir name
commit
|
commitdiff
|
tree
2013-06-14
nmen
d
a
chang
e
male/fema
l
e pare
n
ts
to be the
subj
e
c
t
s , t
o
.
.
.
commit
|
commitdiff
|
tree
2013-06-09
Naama M
e
n
d
a
rem
o
ve leading
a
nd
trailing spaces from al
l
locus searh
c
.
.
.
commit
|
commitdiff
|
tree
2013-05-13
nmen
d
a
add plo
t
name
t
o stock uniquename
commit
|
commitdiff
|
tree
2013-05-07
nmen
d
a
t
ypo
commit
|
commitdiff
|
tree
2013-05-07
nmenda
f
i
xed up
d
at
e
query for stock_re
l
ationshi
p
when me
r
ging
.
.
.
commit
|
commitdiff
|
tree
2013-04-25
nmenda
add yea
r
p
r
ojectprop for multilocation
files
commit
|
commitdiff
|
tree
2013-04-13
N
a
ama Menda
debug info about loadin
g
o
f plot st
o
ck
s
commit
|
commitdiff
|
tree
2013-04-13
Na
a
ma Mend
a
add project name
and year options
commit
|
commitdiff
|
tree
2013-04-13
N
a
ama Menda
snp loader creates now new s
t
o
c
ks if not found i
n
db
commit
|
commitdiff
|
tree
2013-04-12
N
a
ama Menda
add
c
ode
from
m
e
rge
commit
|
commitdiff
|
tree
2013-04-12
Naama Menda
resolved conflict
commit
|
commitdiff
|
tree
2013-04-19
nmenda
ad
d
mor
e
props to
p
henotype d
a
ta
commit
|
commitdiff
|
tree
2013-04-18
nm
e
nda
fix search query
commit
|
commitdiff
|
tree
2013-04-12
Na
a
ma Menda
support f
o
r multiloca
t
ion files
commit
|
commitdiff
|
tree
2013-04-07
N
a
ama Menda
refining c
l
one na
m
e s
e
arc
h
commit
|
commitdiff
|
tree
2013-04-07
Naama Menda
skippin
g
non-
n
umeric
values
commit
|
commitdiff
|
tree
2013-04-07
N
a
a
ma Me
n
d
a
chan
g
e
surviving plants
c
olumn header
commit
|
commitdiff
|
tree
2013-04-17
nmenda
fixe
d
errors
commit
|
commitdiff
|
tree
2013-04-06
Naama Menda
l
oader based on NRCR
I
data
.
Should work with
o
t
h
e
r
.
.
.
commit
|
commitdiff
|
tree
2013-04-06
Naama M
e
nda
typo
commit
|
commitdiff
|
tree
2013-04-06
Na
a
ma
M
enda
merged
c
h
a
n
g
es
commit
|
commitdiff
|
tree
2013-04-06
Naama M
e
n
d
a
loader for ca
s
sava proj
e
ct
s
and their meta
d
ata
commit
|
commitdiff
|
tree
2013-04-08
nme
n
da
cassava
clone loader fi
n
i
s
he
d
commit
|
commitdiff
|
tree
2013-04-08
nm
e
nda
forc
e
using provided marker nam
e
without clea
n
ing
commit
|
commitdiff
|
tree
2013-03-30
N
a
am
a
Menda
loader for
c
as
s
ava
c
lones and s
y
nonym
s
commit
|
commitdiff
|
tree
2013-03-28
Naama Menda
r
e
fin
e
d
opt
i
ons fo
r
loading solcap dat
a
commit
|
commitdiff
|
tree
2012-11-29
Naam
a
Menda
p
ri
n
t shor
t
er mini-ref
commit
|
commitdiff
|
tree
2012-11-29
Naama Menda
referen
c
e_id in l
o
cusgro
u
p_memb
e
r
i
s a dbxref
commit
|
commitdiff
|
tree
2012-11-28
Naama Menda
cxgn members returns a d
a
ta structure with the locus
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama Menda
func
t
ion
for retu
r
ning the seco
n
d level object of locusgroup
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama Menda
option
for
passing locusgroup_name
as an arg
for checking
.
.
.
commit
|
commitdiff
|
tree
2012-11-08
nmenda
fix
c
apitalization
commit
|
commitdiff
|
tree
2012-11-05
Naama Menda
t
g
r
c
wild ac
c
essions
commit
|
commitdiff
|
tree
2012-11-05
Naama Menda
l
o
a
der f
o
r tgr
c
wild access
i
o
ns
commit
|
commitdiff
|
tree
2012-11-06
nmenda
correct nume
r
ic chr
o
mo
s
o
me number
commit
|
commitdiff
|
tree
2012-11-06
nmenda
lo
a
der for
u
pdating unigenes li
n
k
ed
t
o loc
i
base
d
on
.
.
.
commit
|
commitdiff
|
tree
2012-11-06
nmenda
opti
o
n
t
o read file names fr
o
m spreadsheet
commit
|
commitdiff
|
tree
2012-11-06
nmenda
filt
e
r obsolete l
o
ci when
f
etchi
n
g by genome_locus id
commit
|
commitdiff
|
tree
2012-11-04
Naama Menda
c
assava and ba
r
le
y
loaders
commit
|
commitdiff
|
tree
2012-11-03
Naam
a
Menda
M
erge branch 'maste
r
' of gith
u
b
.
c
om
:
solge
n
omics/Phe
n
ome
commit
|
commitdiff
|
tree
2012-11-03
Naama Menda
correc
t
ta
b
-
d
elimi
t
ed format
commit
|
commitdiff
|
tree
2012-11-01
nmen
d
a
correct username f
o
r
T
omato
m
a db
commit
|
commitdiff
|
tree
2012-10-31
Naama Menda
population
sh
o
u
l
d be f
o
r
mut
a
tns
commit
|
commitdiff
|
tree
2012-10-31
Naa
m
a Menda
loader for the Tsukuba mutants
commit
|
commitdiff
|
tree
2012-10-04
Naama Menda
t
w
eak scale cvtermprop load
i
ng script
commit
|
commitdiff
|
tree
2012-07-19
nmenda
typo
commit
|
commitdiff
|
tree
2012-07-19
nm
e
nda
loader for cassava SNP
d
ata
commit
|
commitdiff
|
tree
2012-05-02
Naa
m
a Menda
add updat
i
ng of genom
e
locus identifi
e
r,
d
escription
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
Naama Me
n
da
a
dd a
use
r
name option
commit
|
commitdiff
|
tree
2012-04-18
N
aa
m
a Menda
t
ypo
commit
|
commitdiff
|
tree
2012-04-18
N
a
a
m
a
M
en
d
a
added a check for stock_owner row
commit
|
commitdiff
|
tree
2012-04-17
Naama Menda
corrected loa
d
er for cas
s
ava
pheno
t
yping
p
r
ojects
commit
|
commitdiff
|
tree
2012-04-17
Naama Menda
corrected
l
oad
e
r f
o
r cassava phenotyping projects
commit
|
commitdiff
|
tree
2012-03-15
Naa
m
a Menda
error in
fetchi
n
g dbxref a
c
cession for a pub
o
bject
commit
|
commitdiff
|
tree
2012-03-15
Na
a
m
a
M
enda
modified ontology associat
i
o
n s
c
r
ipt to work wit
h
stocks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
N
aa
m
a
Men
d
a
u
pd
a
ted dump sc
r
i
p
t
.
M
a
ke this a cron
j
o
b
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naama Men
d
a
removin
g
v
ersion
numbers from Solyc gene ids
commit
|
commitdiff
|
tree
2012-01-09
Naama
M
enda
move
d
the ge
n
otype json
to g
e
no
t
yep
p
rop
commit
|
commitdiff
|
tree
2012-01-06
Naama Menda
script for r
e
loading
th
e
solcap snp position
s
as designate
d
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Naama Menda
loade
r
for solc
a
p In
f
inium
array snp genotyp
e
s
commit
|
commitdiff
|
tree
2011-12-20
Naama Menda
fix
e
d
t
ypo
s
commit
|
commitdiff
|
tree
2011-12-18
Naam
a
M
enda
loader
for the cassava phe
n
otypes
commit
|
commitdiff
|
tree
2011-12-17
Naa
m
a Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Na
a
ma Menda
polishi
n
g script
f
or in
s
erti
n
g
/updat
i
ng pota
t
o l
o
ci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Na
a
ma Me
n
da
loader for the potato genom
e
loci
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
pri
n
ting
t
o a large sequence file
commit
|
commitdiff
|
tree
2011-12-14
Naama Me
n
da
fi
x
ed fetchi
n
g
o
f Solyc mrna sequen
c
es
commit
|
commitdiff
|
tree
2011-12-14
Naa
m
a
Me
n
da
adding ita
g
mrna sequence
s
t
o
l
o
ci
b
last d
b
commit
|
commitdiff
|
tree
2011-11-23
Naama Mend
a
fix
e
d cvter
m
name for pl
o
t and mem
b
e
r
s
t
ock re
l
ationship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Naama Menda
capitalizing Qua
l
ity term
commit
|
commitdiff
|
tree
2011-11-22
Naama Menda
r
e
fining add_unigene
m
ethod
commit
|
commitdiff
|
tree
2011-11-16
N
a
ama Menda
M
e
rge branch 'master' into topic/locus
_
control
l
er
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
missin
g
bind va
l
u
e
commit
|
commitdiff
|
tree
2011-11-15
N
a
ama
M
enda
added locus field
t
o the search
commit
|
commitdiff
|
tree
2011-11-15
Na
a
ma Menda
add
i
n
g
disconnect for db
h
without autocommit
commit
|
commitdiff
|
tree
2011-11-08
Naama Men
d
a
up
d
ate D
B
Ix::Class phenome schema c
l
asses
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
Merge branch 'm
a
ster' into topi
c
/locu
s
_con
t
roller
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
resolved conflic
t
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
added ac
c
esso
r
s for genome_lo
c
u
s n
a
me field
commit
|
commitdiff
|
tree
2011-11-09
Naa
m
a Menda
disabling aut
o
commit
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
patch fo
r
addi
n
g a locus field to the locus
t
able
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
N
aama M
e
n
d
a
a
ddin
g
phenot
y
pe pro
p
s to sol
c
ap phenotypes
commit
|
commitdiff
|
tree
2011-10-30
Na
a
m
a
Menda
usi
n
g dbc-
>
dbh instead
of
C
XGM::D
B
:
:
C
onne
c
tion
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obs
o
let
i
ng loc
u
s alias if the ITA
G
id
i
s just
the alias
commit
|
commitdiff
|
tree
2011-10-15
N
a
am
a
M
e
nd
a
scrip
t
f
or
obsoleting I
T
AG l
o
ci
f
r
om phenome
.
locus
commit
|
commitdiff
|
tree
2011-10-15
N
aama Menda
removing trailing
spaces
f
rom uni
t
nam
e
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
removing
tr
a
iling
s
pacesf
r
omuni
t
n
a
me
commit
|
commitdiff
|
tree
2011-10-14
Naama
M
enda
fixing
bug in merge_lo
c
us
funct
i
on when merged locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
N
aama Menda
m
ak
i
ng
s
ure plant hait terms are
f
ound
commit
|
commitdiff
|
tree
2011-10-12
Naama
M
enda
looking at d
i
rect child terms for qualitative terms
commit
|
commitdiff
|
tree
2011-10-11
Naama Menda
loading qu
a
lit
a
tive t
e
rms cor
r
ect
l
y
commit
|
commitdiff
|
tree
2011-10-11
Naa
m
a Mend
a
addin
g
un
i
t ontology cvterm
s
to the
phe
n
ot
y
eps
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
just warn
i
n
g
if parent st
o
ck is not found
commit
|
commitdiff
|
tree
2011-10-03
Naama Men
d
a
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
parsing more options for solcap image files
commit
|
commitdiff
|
tree
2011-10-02
Naama Me
n
d
a
fin
d
the ye
a
r of t
h
e
p
r
o
ect from the metadat
a
f
ile
commit
|
commitdiff
|
tree
2011-10-02
Naama
Menda
year should b
e
a propert
y
of the pr
o
ject
commit
|
commitdiff
|
tree
next