repo.or.cz
/
phenome.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
loader for solcap Infinium array snp genotypes
2011-12-23
Naama Menda
l
o
ad
e
r fo
r
s
olcap Inf
i
nium a
r
ray
s
np ge
n
otypes
commit
|
commitdiff
|
tree
2011-12-20
N
aam
a
Mend
a
fixed typos
commit
|
commitdiff
|
tree
2011-12-18
Naa
m
a M
e
nda
l
o
ader for the ca
s
sava phenotypes
commit
|
commitdiff
|
tree
2011-12-17
Naama Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naa
m
a Menda
polishin
g
script for
i
n
s
e
rti
n
g
/
updating potato loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
loa
d
er for the p
o
tato ge
n
ome l
o
ci
commit
|
commitdiff
|
tree
2011-12-15
Naama
M
end
a
p
r
inting
t
o a large sequence file
commit
|
commitdiff
|
tree
2011-12-14
Naama M
e
nda
fixed fetchi
n
g
of S
o
lyc
m
rn
a
se
q
uences
commit
|
commitdiff
|
tree
2011-12-14
Naama Menda
adding itag mrna s
e
quen
c
es
to
l
o
c
i bl
a
st db
commit
|
commitdiff
|
tree
2011-11-23
Naama
Menda
fixed c
v
term n
a
me for
plo
t
and
me
m
ber stock r
e
lationship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
N
a
ama Men
d
a
capitalizing Quality term
commit
|
commitdiff
|
tree
2011-11-22
Naama Men
d
a
re
f
i
n
i
n
g add_unigene method
commit
|
commitdiff
|
tree
2011-11-16
Na
a
m
a
M
enda
Merge bra
n
ch 'master' into topic/lo
c
us_controll
e
r
commit
|
commitdiff
|
tree
2011-11-16
Naama Me
n
d
a
missing bind value
commit
|
commitdiff
|
tree
2011-11-15
Naam
a
M
e
nda
added locus field to the sea
r
ch
commit
|
commitdiff
|
tree
2011-11-15
Naama Menda
add
i
ng discon
n
ect for dbh wi
t
hout
a
utoc
o
mmit
commit
|
commitdiff
|
tree
2011-11-08
N
a
ama Mend
a
update DB
I
x::Class phen
o
me schema class
e
s
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
Merge branch 'mast
e
r' into t
o
p
ic/locus_
c
ont
r
ol
l
e
r
commit
|
commitdiff
|
tree
2011-11-07
Naa
m
a Menda
resolved
con
f
lict
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
added accesso
r
s for gen
o
m
e
_loc
u
s
n
ame fiel
d
commit
|
commitdiff
|
tree
2011-11-09
N
a
a
m
a Menda
d
is
a
bli
n
g
autocommi
t
commit
|
commitdiff
|
tree
2011-11-07
Na
a
m
a Menda
patch
f
or adding a loc
u
s field t
o
the locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Mend
a
add
i
n
g phenotype prop
s
to solcap phenotypes
commit
|
commitdiff
|
tree
2011-10-30
Naama Menda
usi
n
g d
b
c-
>
dbh in
s
t
ead of CXG
M
::D
B
::Con
n
ect
i
on
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
obsoleting locus alias if the ITAG
i
d
is jus
t
the alias
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
script for obs
o
leting ITAG
l
o
ci from phe
n
ome
.
locus
commit
|
commitdiff
|
tree
2011-10-15
N
a
ama Menda
removing
t
rail
i
ng
s
paces
from unit name
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
re
m
o
v
ing t
r
ailing sp
a
ce
s
fromun
i
t
na
m
e
commit
|
commitdiff
|
tree
2011-10-14
Naama Me
n
d
a
fixing b
u
g
i
n
merge_
l
ocus f
u
nction when merged l
o
cus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama
Menda
maki
n
g s
u
re
p
lan
t
hait t
e
rms
a
re
found
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
look
i
ng at direct ch
i
ld t
e
rms for qualitative terms
commit
|
commitdiff
|
tree
2011-10-11
Naama M
e
nda
l
o
ading qualitative terms
correctly
commit
|
commitdiff
|
tree
2011-10-11
Naama
M
e
n
da
addin
g
u
nit ont
o
l
ogy cvte
r
ms to the
p
henoty
e
ps
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
just
w
a
rning if parent st
o
ck is n
o
t
found
commit
|
commitdiff
|
tree
2011-10-03
N
a
a
m
a Menda
typo
commit
|
commitdiff
|
tree
2011-10-03
N
aama Me
n
da
parsing more options for solca
p
imag
e
files
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
find
the year of the p
r
oect from the
meta
d
ata
f
i
le
commit
|
commitdiff
|
tree
2011-10-02
N
aama
M
e
n
da
year should be a
prope
r
t
y
o
f the p
r
o
j
ect
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
s
earcg is
better
t
ha
n
find
here
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama Men
d
a
s
k
ipping for non-exis
t
ing plots
commit
|
commitdiff
|
tree
2011-09-27
Naama M
e
n
da
checking corr
e
c
tly if an image is loaded and
if w
a
s
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama M
e
nda
better
p
rin
t
ing of er
r
or messages
commit
|
commitdiff
|
tree
2011-09-27
Naam
a
Menda
a
d
ded
a che
c
k
f
or existing sto
c
k
-i
m
age l
i
nks
commit
|
commitdiff
|
tree
2011-09-23
Naa
m
a Men
d
a
last typo?
commit
|
commitdiff
|
tree
2011-09-23
Naama
M
enda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
added e
x
cep
t
ion
fo
r
plantin
g
date prop
e
rty
commit
|
commitdiff
|
tree
2011-09-23
Naa
m
a
Menda
a
d
d
e
d year
o
ption for find
i
ng uniq
u
e plot
names
commit
|
commitdiff
|
tree
2011-09-18
Naa
m
a
Menda
setting the transaction
p
rop
e
rly
commit
|
commitdiff
|
tree
2011-09-18
Naama Me
n
d
a
checking
i
f a syn
o
nym value was
a
lread
y
l
oa
d
ed
commit
|
commitdiff
|
tree
2011-09-17
N
a
am
a
M
e
n
d
a
l
oad
e
r
for so
l
ca
p
images
commit
|
commitdiff
|
tree
2011-09-17
Naama Menda
using txn_do for the trans
a
ction
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
modified op
t
io
n
s for
l
oading
solcap TA
data
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
added pa
r
sing of qualitati
v
e traits into the
tomato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
f
i
xed loadi
n
g stock owner int
o
the
r
igh
t
place
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
no need to
c
lon
e
the d
b
h
commit
|
commitdiff
|
tree
2011-09-14
Na
a
ma M
e
nda
added missing
phenome DBIC cl
a
ss
e
s
commit
|
commitdiff
|
tree
2011-09-14
Naama Me
n
da
using CXGN::Phenome:
:
S
c
he
m
a for checking/inserting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naam
a
M
enda
r
emoved outdated load
i
ng script
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
u
pdated script for loading solcap acce
s
sions
commit
|
commitdiff
|
tree
2011-09-14
Naama
Me
n
da
upd
a
t
e
d C
X
GN::Phenome::Sc
h
ema c
l
a
s
ses
commit
|
commitdiff
|
tree
2011-09-13
N
a
am
a
Mend
a
typo
commit
|
commitdiff
|
tree
2011-09-04
Naa
m
a Menda
loading s
c
ript
for SolCAP potato images
commit
|
commitdiff
|
tree
2011-09-02
Naama Menda
loder for
i
mages f
r
o
m
Sa
n
dy K
n
app
commit
|
commitdiff
|
tree
2011-08-31
Naam
a
Menda
adding date prop
to experim
e
nts
commit
|
commitdiff
|
tree
2011-08-28
Naa
m
a M
e
nd
a
lo
a
d
i
n
g scrip
t
f
o
r pot
a
t
o
s
o
l
c
ap da
t
a
.
Hopeful
l
y n
e
x
t
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
Naama
M
enda
l
o
ader
f
or TA
I
R
l
oci
commit
|
commitdiff
|
tree
2011-06-19
Naama Menda
updated solcap stuff
fo
r
reloadin
g
th
e
potat
o
2009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
Naama Mend
a
patch for changes
i
n C
h
ado ND s
c
hem
a
commit
|
commitdiff
|
tree
2011-04-22
Na
a
ma Me
n
da
db p
a
tch for grant
i
ng delete
o
n meta
d
ata to we
b
_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama
Menda
update
d
DBIx cla
s
ses
,
no mo
r
e phe
n
o
me
.
phenotype t
a
ble
commit
|
commitdiff
|
tree
2011-04-18
Naama Menda
skipping metadata inser
t
i
f
on
e
of
the
F
Ks is null
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
adding
web
_
usr
permissio
n
s to metadata table
commit
|
commitdiff
|
tree
2011-04-17
Naama Me
n
da
t
y
po in query
commit
|
commitdiff
|
tree
2011-04-17
Naama M
e
nd
a
f
orgot to add we
b
_usr permissions
commit
|
commitdiff
|
tree
2011-04-17
Naama M
e
nda
using stock_
a
llele a
n
d st
o
ck_image i
n
stea
d
of sto
c
kprop
commit
|
commitdiff
|
tree
2011-04-16
N
aama Menda
db patch for mig
r
ating
stock
image,
allele
,
and own
e
r
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
N
aama
M
enda
refactoring funct
i
ons that use
i
n
d
ividuals
.
Now we
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama
Menda
typos
commit
|
commitdiff
|
tree
2011-04-01
Naama Mend
a
deleting fi
r
st existing allele l
i
nks
commit
|
commitdiff
|
tree
2011-04-01
Naa
m
a Menda
db patch f
o
r c
o
rrectly
storing a
l
l alle
l
es linke
d
with
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Me
n
d
a
se
l
ecting all all
e
les, inclu
d
ing
d
efaults on
e
s
commit
|
commitdiff
|
tree
2011-04-01
Naama Mend
a
r
emoved searc
h
ing
l
oci by stock phenotyp
e
s
.
To
d
o this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
N
aama
M
end
a
added an
o
pti
o
n
to pass
t
he
i
mage_path
.
this lets run
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
Naama Menda
fo
r
got to allow dupl
i
cate v
a
lues
.
W
i
tho
u
t this multiple
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naam
a
Menda
pol
i
she
d
loading script for lycotil
l
i
mages
commit
|
commitdiff
|
tree
2011-03-28
N
aama Menda
loading s
c
r
i
pt for lycotill ac
c
essio
n
s
commit
|
commitdiff
|
tree
2011-03-23
Naama M
e
nda
d
bpa
t
ch f
o
r fixing locus_marker FK
commit
|
commitdiff
|
tree
2011-03-22
Naama Menda
added an interim func
t
ion for ge
t
ting p
o
pul
a
tion obj
e
ct
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
N
aama Mend
a
db patch for
m
oving stock annota
t
ions from stock_d
b
xref
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama Menda
added missing dependency to db pathc
commit
|
commitdiff
|
tree
2011-03-09
Na
a
ma
M
enda
silly typ
o
in db
p
at
c
h
commit
|
commitdiff
|
tree
2011-03-09
Naama
M
e
nda
db patch f
o
r the missing link to stock_id
from the
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
Naa
m
a
M
enda
silly typo
commit
|
commitdiff
|
tree
2011-03-03
Naama M
e
nda
fixed
l
oading experi
m
ent ids f
o
r
e
ac
h
stock phenotyp
e
d
commit
|
commitdiff
|
tree
2011-02-07
N
aa
m
a Menda
db p
a
th for a
d
d
i
ng undef
o
pti
o
n
to allele mode_of_inheri
t
anc
.
.
.
commit
|
commitdiff
|
tree
2010-12-08
Naama Men
d
a
f
i
ltering
o
b
sole
t
e loci and
non-current unigenes
commit
|
commitdiff
|
tree
2010-12-01
Naam
a
Mend
a
patch for u
p
dating the
unique constrain
t
on nd_experiment_ph
.
.
.
commit
|
commitdiff
|
tree
next