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loader for the Tsukuba mutants
2012-10-31
Naama
Men
d
a
loader for
t
he
Ts
u
kuba mutants
commit
|
commitdiff
|
tree
2012-10-04
Naama Menda
twea
k
scale cvtermpro
p
loading scri
p
t
commit
|
commitdiff
|
tree
2012-05-02
N
a
ama Men
d
a
add up
d
a
ting of genome
l
ocus identifie
r
, desc
r
iptio
n
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
Na
a
ma
M
e
nda
add
a user na
m
e opti
o
n
commit
|
commitdiff
|
tree
2012-04-18
Naama Men
d
a
typo
commit
|
commitdiff
|
tree
2012-04-18
Naa
m
a Menda
added a
che
c
k for s
t
ock_o
w
ner row
commit
|
commitdiff
|
tree
2012-04-17
Na
a
m
a
Menda
corrected loader for cassava
p
h
e
notyping projects
commit
|
commitdiff
|
tree
2012-04-17
Na
a
ma Menda
correcte
d
l
oader for cassava p
h
e
n
otyping pro
j
ects
commit
|
commitdiff
|
tree
2012-03-15
N
aama Me
n
da
e
rror in fetch
i
ng dbxref accessio
n
for a pub ob
j
ect
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
modified ontology
assoc
i
ation script to
work with stocks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Naama Menda
updated
dump script
.
Make this a c
r
on
job
.
.
commit
|
commitdiff
|
tree
2012-01-11
N
a
ama Menda
removi
n
g versi
o
n numbers from Solyc gene ids
commit
|
commitdiff
|
tree
2012-01-09
Na
a
ma
Menda
moved
t
he ge
n
otype js
o
n to geno
t
yepp
r
o
p
commit
|
commitdiff
|
tree
2012-01-06
Naama M
e
n
d
a
scr
i
p
t for reloading the so
l
c
a
p snp
positions
as design
a
t
e
d
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Naama Menda
loader
for solcap I
n
f
inium arra
y
snp genotype
s
commit
|
commitdiff
|
tree
2011-12-20
Naama Menda
fixed typos
commit
|
commitdiff
|
tree
2011-12-18
Naama Men
d
a
loader for the c
a
s
s
a
va phenotypes
commit
|
commitdiff
|
tree
2011-12-17
Na
a
ma Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naa
m
a
M
enda
polishing script for i
n
sert
i
n
g
/updating potato loc
i
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
l
o
ader for
t
he
p
ot
a
to gen
o
m
e
loci
commit
|
commitdiff
|
tree
2011-12-15
Naama Menda
printing to
a large seq
u
ence fil
e
commit
|
commitdiff
|
tree
2011-12-14
Naama Me
n
da
fixed fetching o
f
Solyc mrna sequences
commit
|
commitdiff
|
tree
2011-12-14
Naama Me
n
da
add
i
ng it
a
g mrna seque
n
ces
to loci blast db
commit
|
commitdiff
|
tree
2011-11-23
Naama
Me
n
da
f
i
xed
c
vterm nam
e
for plot and m
e
mber st
o
ck relationship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Naama
M
enda
capitaliz
i
n
g Qualit
y
ter
m
commit
|
commitdiff
|
tree
2011-11-22
Na
a
ma Me
n
da
r
e
f
i
ni
n
g ad
d
_
u
n
igene method
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
Merge branch 'master' into topic/lo
c
u
s_controller
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
m
i
ssing bi
n
d value
commit
|
commitdiff
|
tree
2011-11-15
Naama
Menda
added locus field to the
s
e
a
r
ch
commit
|
commitdiff
|
tree
2011-11-15
N
a
ama
Menda
a
d
ding disconnect f
o
r
dbh without autocommit
commit
|
commitdiff
|
tree
2011-11-08
Naama Menda
update DBIx::Cl
a
ss phenome s
c
he
m
a c
l
asses
commit
|
commitdiff
|
tree
2011-11-07
Naama Mend
a
Merge branch 'm
a
s
ter' int
o
topic/l
o
cus_controller
commit
|
commitdiff
|
tree
2011-11-07
Naam
a
Menda
resolved
confl
i
c
t
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
added
a
ccessors for genome_locus nam
e
f
i
e
l
d
commit
|
commitdiff
|
tree
2011-11-09
Naama Mend
a
d
isab
l
ing a
u
toc
o
mmit
commit
|
commitdiff
|
tree
2011-11-07
Naama Men
d
a
pa
t
ch f
o
r addi
n
g a
locus f
i
eld to
the locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Menda
add
i
ng ph
e
n
o
t
y
p
e prop
s
to solcap phenotypes
commit
|
commitdiff
|
tree
2011-10-30
Na
a
ma Menda
usi
n
g db
c
-
>
dbh ins
t
ead
of CXGM::DB::Conn
e
ction
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
obso
l
eting locus alias if the ITA
G
id is just
t
he alias
commit
|
commitdiff
|
tree
2011-10-15
N
aam
a
Menda
scri
p
t for obsoleting IT
A
G loci
f
rom phenome
.
lo
c
u
s
commit
|
commitdiff
|
tree
2011-10-15
Naa
m
a Menda
removing trailing spaces from unit name
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
r
e
moving trailing sp
a
cesfr
o
munit name
commit
|
commitdiff
|
tree
2011-10-14
N
aama
M
enda
fixing b
u
g in m
e
rge_locus
function wh
e
n m
e
rged
locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
ma
k
ing
s
ure plant hait t
e
r
m
s are foun
d
commit
|
commitdiff
|
tree
2011-10-12
Naa
m
a Menda
l
o
okin
g
at direct child t
e
rms for q
u
a
l
itative terms
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma Me
n
d
a
loading qualitative term
s
co
r
r
e
c
t
l
y
commit
|
commitdiff
|
tree
2011-10-11
Naa
m
a
Menda
adding unit on
t
ology cvte
r
ms to t
h
e p
h
enotyeps
commit
|
commitdiff
|
tree
2011-10-03
N
aama Menda
just warning
if paren
t
st
o
ck
i
s not found
commit
|
commitdiff
|
tree
2011-10-03
Naama
Men
d
a
t
y
po
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
parsing mor
e
options for solcap
i
mage files
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
fin
d
the year of the pr
o
e
c
t from the
me
t
adata f
i
le
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
yea
r
shoul
d
be a pro
p
e
r
t
y of
t
h
e project
commit
|
commitdiff
|
tree
2011-10-02
Naama Men
d
a
searcg i
s
better th
a
n f
i
nd he
r
e
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama Me
n
da
skip
p
ing for non-existin
g
plots
commit
|
commitdiff
|
tree
2011-09-27
Naam
a
Me
n
d
a
che
c
king corr
e
ctly i
f
a
n i
m
age is l
o
ad
e
d and if
was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
t
y
po
commit
|
commitdiff
|
tree
2011-09-27
Naa
m
a Menda
better printing o
f
error me
s
sages
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
ad
d
ed a check for
e
xisting sto
c
k
-image links
commit
|
commitdiff
|
tree
2011-09-23
Naama M
e
nda
last
typo?
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
added except
i
on
f
or planting date property
commit
|
commitdiff
|
tree
2011-09-23
Naama Me
n
da
a
d
ded
y
e
ar option for findin
g
uni
q
ue plot names
commit
|
commitdiff
|
tree
2011-09-18
Naa
m
a
Men
d
a
setting
the transaction properly
commit
|
commitdiff
|
tree
2011-09-18
Naama Men
d
a
checki
n
g if
a
synonym
v
alue was already lo
a
d
e
d
commit
|
commitdiff
|
tree
2011-09-17
Na
a
ma
M
enda
lo
a
der
f
or solcap images
commit
|
commitdiff
|
tree
2011-09-17
Naama Men
d
a
using txn_do f
o
r the transact
i
on
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
modified options for l
o
ading solca
p
TA
data
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
adde
d
p
a
rsi
n
g
o
f q
u
alitative traits
i
nto the
tomato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
f
ixe
d
load
i
n
g stock own
e
r into t
h
e right place
commit
|
commitdiff
|
tree
2011-09-14
Naa
m
a Menda
no need to clone th
e
dbh
commit
|
commitdiff
|
tree
2011-09-14
N
a
ama Menda
a
dded missing phenome DBIC classes
commit
|
commitdiff
|
tree
2011-09-14
Naa
m
a Menda
usin
g
CXGN:
:
Phenome::Schema for che
c
king/in
s
erti
n
g
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Na
a
ma M
e
nda
removed outdated loading scri
p
t
commit
|
commitdiff
|
tree
2011-09-14
Naam
a
Menda
updated script for loa
d
ing solcap acc
e
ssions
commit
|
commitdiff
|
tree
2011-09-14
Naama Mend
a
upd
a
ted
C
XGN::Phenome::Schema classes
commit
|
commitdiff
|
tree
2011-09-13
Naama
Mend
a
typo
commit
|
commitdiff
|
tree
2011-09-04
Naama Menda
loading sc
r
ipt fo
r
S
olCAP
p
otato
i
mages
commit
|
commitdiff
|
tree
2011-09-02
Naama Menda
loder for image
s
f
r
o
m Sandy Knapp
commit
|
commitdiff
|
tree
2011-08-31
Naama Menda
adding date p
r
o
p
to ex
p
e
riments
commit
|
commitdiff
|
tree
2011-08-28
Naama Menda
loa
d
in
g
script for pota
t
o solcap data
.
Hop
e
full
y
next
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
Naama Menda
loader
f
or TAIR loci
commit
|
commitdiff
|
tree
2011-06-19
Naam
a
Menda
updated solcap stu
f
f for relo
a
ding the potato 2009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
N
a
ama
Menda
patc
h
for changes in Chado
ND schema
commit
|
commitdiff
|
tree
2011-04-22
Naama Menda
db pa
t
c
h
for granting
delete on
m
e
tad
a
ta to
w
eb_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
N
aam
a
Menda
updated DBI
x
classes , no more p
h
enome
.
ph
e
notype table
commit
|
commitdiff
|
tree
2011-04-18
Naama
M
enda
skipping
m
e
tada
t
a
inser
t
if
one of
t
he FKs
i
s
null
commit
|
commitdiff
|
tree
2011-04-17
Na
a
ma Menda
adding web_usr permissi
o
n
s to metadata
t
able
commit
|
commitdiff
|
tree
2011-04-17
Naama Me
n
da
typo in q
u
e
r
y
commit
|
commitdiff
|
tree
2011-04-17
N
aama Menda
fo
r
got t
o
add we
b
_usr permissions
commit
|
commitdiff
|
tree
2011-04-17
Naama M
e
nd
a
using stock
_
allele and stock_image i
n
stead of
stockpro
p
commit
|
commitdiff
|
tree
2011-04-16
Naam
a
M
e
nda
db patch for migrating
s
t
ock imag
e
,
all
e
le, a
n
d owner
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama
M
en
d
a
r
e
f
actor
i
ng
f
unction
s
that use in
d
ividuals
.
Now we
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Na
a
ma
M
enda
typ
o
s
commit
|
commitdiff
|
tree
2011-04-01
Naama
M
e
nda
deleting first
e
xisting
a
llele lin
k
s
commit
|
commitdiff
|
tree
2011-04-01
N
a
ama Menda
db patch for c
o
rrectly storing al
l
allele
s
linked w
i
th
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
se
l
ecting all all
e
le
s
, includ
i
ng defaults on
e
s
commit
|
commitdiff
|
tree
2011-04-01
Naama Mend
a
remove
d
searc
h
i
ng loci by stock phenot
y
pes
.
To d
o
this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naam
a
Menda
added an
o
ption to pass
th
e
image_p
a
th
.
t
h
i
s
le
t
s run
.
.
.
commit
|
commitdiff
|
tree
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