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loader for the Tsukuba mutants
2012-10-31
Naama Menda
loader for the Tsukuba mut
a
nts
commit
|
commitdiff
|
tree
2012-10-04
Naama Menda
tweak sc
a
le cvtermprop l
o
ading script
commit
|
commitdiff
|
tree
2012-05-02
Naama Me
n
da
add u
p
d
a
ting of genome locus identifi
e
r, description
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
N
aama Menda
a
dd a use
r
name option
commit
|
commitdiff
|
tree
2012-04-18
Naama Men
d
a
typo
commit
|
commitdiff
|
tree
2012-04-18
Na
a
ma Menda
ad
d
e
d
a che
c
k for stock_
o
wner row
commit
|
commitdiff
|
tree
2012-04-17
Naama
Me
n
da
co
r
r
e
cted
l
oade
r
for cassa
v
a
p
h
e
notyping projects
commit
|
commitdiff
|
tree
2012-04-17
Naa
m
a Menda
c
o
rrec
t
e
d
loader for cassava
p
henotypi
n
g projects
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
error in fetc
h
ing dbxref accession for a
pu
b
objec
t
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
modi
f
ied ont
o
logy association sc
r
ipt to work with stock
s
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Naama Menda
updated dump script
.
Ma
k
e this a cron
j
o
b
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naama Menda
removing ve
r
sion
numbers fro
m
Solyc gene ids
commit
|
commitdiff
|
tree
2012-01-09
N
aa
m
a M
e
nda
moved
t
he genotype
j
son to genotyepprop
commit
|
commitdiff
|
tree
2012-01-06
Naama Menda
s
c
ript for
reload
i
ng the
so
l
cap snp posit
i
ons
a
s designated
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Naama Menda
l
o
ader
for solc
a
p Infinium a
r
ray snp genotypes
commit
|
commitdiff
|
tree
2011-12-20
Naama Mend
a
fi
x
e
d
typos
commit
|
commitdiff
|
tree
2011-12-18
Naama Menda
loader for the
c
a
ssa
v
a
p
henotyp
e
s
commit
|
commitdiff
|
tree
2011-12-17
Na
a
ma Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
polishing s
c
ript
f
or
inserting/updating potato loc
i
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Na
a
m
a
Menda
l
o
ader
for the
po
t
a
t
o g
e
nome
loci
commit
|
commitdiff
|
tree
2011-12-15
Naama Mend
a
printing to
a
large sequence f
i
le
commit
|
commitdiff
|
tree
2011-12-14
Naama
M
enda
f
ixed fet
c
hing of Solyc mr
n
a sequences
commit
|
commitdiff
|
tree
2011-12-14
Naama Mend
a
addin
g
it
a
g mrna sequen
c
es to loci blast db
commit
|
commitdiff
|
tree
2011-11-23
Naama Menda
fixed cvterm name for plot a
n
d me
m
be
r
st
o
c
k
relation
s
hip
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
N
a
ama Men
d
a
ca
p
it
a
lizing
Quality term
commit
|
commitdiff
|
tree
2011-11-22
Na
a
ma Menda
refining ad
d
_uni
g
e
ne method
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
Merge branch
'
mast
e
r' into topic/locus_controller
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
missing
b
i
n
d
value
commit
|
commitdiff
|
tree
2011-11-15
Na
a
m
a Men
d
a
added
l
oc
u
s
fie
l
d to t
h
e sear
c
h
commit
|
commitdiff
|
tree
2011-11-15
Naama
M
enda
a
d
ding di
s
connect for d
b
h
w
ithout au
t
o
c
ommit
commit
|
commitdiff
|
tree
2011-11-08
Naama M
e
nda
u
p
date DBIx::Class phen
o
me
s
chema clas
s
e
s
commit
|
commitdiff
|
tree
2011-11-07
Naam
a
Menda
Merge branch
'mast
e
r' in
t
o topic
/
locus_controller
commit
|
commitdiff
|
tree
2011-11-07
Na
a
ma Menda
resolved c
o
nflict
commit
|
commitdiff
|
tree
2011-11-07
Naama
M
enda
added accessors fo
r
genome_locus
n
ame field
commit
|
commitdiff
|
tree
2011-11-09
Naama Menda
disabling
au
t
o
commit
commit
|
commitdiff
|
tree
2011-11-07
Na
a
ma
Menda
patch for addi
n
g a locu
s
field
to the locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naam
a
Mend
a
ad
d
ing
phenotype props to sol
c
a
p
phenot
y
pes
commit
|
commitdiff
|
tree
2011-10-30
Naam
a
Menda
using dbc->dbh instead of CXGM
:
:DB::Connection
commit
|
commitdiff
|
tree
2011-10-15
N
aama Menda
o
bsoleting l
o
cus alias if th
e
ITAG id is just the alias
commit
|
commitdiff
|
tree
2011-10-15
Na
a
ma Me
n
da
scrip
t
for obsol
e
ting ITAG lo
c
i f
r
om phenome
.
locus
commit
|
commitdiff
|
tree
2011-10-15
N
a
ama Menda
removing tr
a
il
i
ng s
p
aces from un
i
t na
m
e
commit
|
commitdiff
|
tree
2011-10-15
N
aama Menda
remo
v
i
ng trailing spacesfromunit
n
ame
commit
|
commitdiff
|
tree
2011-10-14
Naama Menda
fixing
bug in
m
e
rge_l
o
cus
fu
n
ction when merged locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama
Mend
a
making sure p
l
a
n
t hait ter
m
s are found
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
looking a
t
d
i
rect
c
h
ild
terms for
q
u
a
li
t
a
ti
v
e t
e
rms
commit
|
commitdiff
|
tree
2011-10-11
Naama Mend
a
loading
q
u
alit
a
tive te
r
ms corre
c
tly
commit
|
commitdiff
|
tree
2011-10-11
Naama Menda
adding un
i
t ontolog
y
cvterms to the phenotyeps
commit
|
commitdiff
|
tree
2011-10-03
Naa
m
a Menda
just warning if parent stoc
k
is not found
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
t
ypo
commit
|
commitdiff
|
tree
2011-10-03
Naa
m
a
Menda
p
arsi
n
g more
o
ptions for s
o
lcap image files
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
find
the year of the proect from the met
a
data file
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
year
s
h
oul
d
b
e
a propert
y
of the project
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
s
e
arcg
i
s
be
t
ter than find here
commit
|
commitdiff
|
tree
2011-09-27
Naama
M
en
d
a
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
skipping for non-ex
i
sting plots
commit
|
commitdiff
|
tree
2011-09-27
Na
a
ma Menda
checkin
g
c
o
rrectly if an image is loaded a
n
d
i
f was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
N
a
ama Mend
a
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
b
e
t
ter printing of error messa
g
es
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
added a check for existi
n
g
stoc
k
-im
a
ge li
n
ks
commit
|
commitdiff
|
tree
2011-09-23
Naam
a
Menda
last typ
o
?
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
t
y
po
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
t
y
po
commit
|
commitdiff
|
tree
2011-09-23
Naama
Menda
added exce
p
ti
o
n for pla
n
t
i
ng date p
r
op
e
rty
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
ad
d
ed
y
e
ar optio
n
f
o
r
finding unique plot names
commit
|
commitdiff
|
tree
2011-09-18
Na
a
ma Menda
setti
n
g
the transaction properly
commit
|
commitdiff
|
tree
2011-09-18
Naama Menda
checking if a sy
n
onym
val
u
e
w
a
s
a
lready l
o
a
de
d
commit
|
commitdiff
|
tree
2011-09-17
Naama Men
d
a
loader
for so
l
cap im
a
ges
commit
|
commitdiff
|
tree
2011-09-17
N
a
ama Menda
usi
n
g t
x
n_do
for the tra
n
s
acti
o
n
commit
|
commitdiff
|
tree
2011-09-16
N
aama Menda
m
o
d
ified
opt
i
ons for
loading sol
c
ap TA data
commit
|
commitdiff
|
tree
2011-09-16
Naama M
e
nda
added pars
i
ng of qualit
a
tive tra
i
ts into the tomat
o
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naa
m
a M
e
nda
fixed loading
s
tock owner
into the right place
commit
|
commitdiff
|
tree
2011-09-14
Naama
Menda
no need to clone the dbh
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
added
missing phenome DBIC classes
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
u
sing CXG
N
::Phenome::
S
chema
fo
r
c
hecking/inserting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
removed
o
utdated load
i
ng script
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
updated script fo
r
loading solcap acces
s
ions
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
upd
a
ted CXGN::Phenome::Schema
classes
commit
|
commitdiff
|
tree
2011-09-13
N
a
ama Menda
typo
commit
|
commitdiff
|
tree
2011-09-04
Naama
Men
d
a
lo
a
ding script for
SolC
A
P
p
o
t
ato images
commit
|
commitdiff
|
tree
2011-09-02
Naama Menda
loder
f
o
r
images from Sandy Knap
p
commit
|
commitdiff
|
tree
2011-08-31
Naama
Menda
adding
da
t
e
p
r
op to ex
p
eriment
s
commit
|
commitdiff
|
tree
2011-08-28
Na
a
ma Menda
loadin
g
s
c
ript fo
r
potato solcap da
t
a
.
Hopef
u
lly next
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
N
a
ama Menda
l
oader for TAIR
l
o
ci
commit
|
commitdiff
|
tree
2011-06-19
Naama Me
n
da
updated solcap stuf
f
for r
e
loading the po
t
ato 2009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
Naama Menda
patch fo
r
c
hang
e
s
i
n Chad
o
N
D
schema
commit
|
commitdiff
|
tree
2011-04-22
Naama
M
enda
db
p
a
tch for grant
i
ng
d
elete on
m
etadata
t
o w
e
b_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama Menda
up
d
ated
DBIx
c
las
s
es , no mo
r
e
pheno
m
e
.
phenotyp
e
table
commit
|
commitdiff
|
tree
2011-04-18
Naama Menda
skipping metadat
a
insert if
o
ne of the F
K
s
is null
commit
|
commitdiff
|
tree
2011-04-17
Na
a
ma Me
n
d
a
adding
web_
u
s
r pe
r
mission
s
to m
e
tadata table
commit
|
commitdiff
|
tree
2011-04-17
N
aama
M
enda
typo in qu
e
ry
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
forgot to a
d
d web_us
r
pe
r
mis
s
ions
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
u
sing stock_al
l
ele a
n
d stock
_
i
m
age instea
d
of
s
tock
p
rop
commit
|
commitdiff
|
tree
2011-04-16
Naama Menda
db patch for migrating stock image, allele, and ow
n
e
r
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Na
a
ma Menda
refactoring fun
c
tion
s
that use individuals
.
N
o
w
we
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naam
a
M
e
nda
t
ypos
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
deleting first
e
xisting allele links
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
d
b
patch
for correctly st
o
r
i
ng all alleles linked with
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naam
a
Menda
selecting all
alle
l
es, including defaults one
s
commit
|
commitdiff
|
tree
2011-04-01
Naama Men
d
a
rem
o
ved
searching loc
i
by stock
p
henoty
p
es
.
To
d
o
t
his
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
N
aama Menda
a
dded an option to pass
the image_path
.
this lets run
.
.
.
commit
|
commitdiff
|
tree
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