repo.or.cz
/
phenome.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
added locus field to the search
2011-11-15
N
aama
M
e
nda
adde
d
locus
field
to
t
he se
a
rch
commit
|
commitdiff
|
tree
2011-11-15
Na
a
ma Menda
adding disconnec
t
f
o
r
db
h
wit
h
out autoc
o
mmit
commit
|
commitdiff
|
tree
2011-11-07
Naam
a
Me
n
da
added accessors for
g
enome_locus name field
commit
|
commitdiff
|
tree
2011-11-09
Naa
m
a M
e
nda
d
isabling auto
c
ommit
commit
|
commitdiff
|
tree
2011-11-07
Naama Men
d
a
p
a
t
ch for adding a l
o
c
us fiel
d
to the locus tab
l
e
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Menda
ad
d
i
n
g pheno
t
yp
e
props to
s
o
lc
a
p
p
h
enotypes
commit
|
commitdiff
|
tree
2011-10-15
N
aama Menda
o
bsol
e
ting loc
u
s alias if t
h
e ITAG id
is
j
ust
th
e
alias
commit
|
commitdiff
|
tree
2011-10-15
Naama Me
n
da
script for obsoleting
I
TAG loc
i
from phenome
.
locus
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
removing trailing spac
e
s from unit name
commit
|
commitdiff
|
tree
2011-10-15
Naama
Menda
r
emoving
trailing sp
a
cesfromunit name
commit
|
commitdiff
|
tree
2011-10-14
Naama
M
end
a
fixing bug in merg
e
_locus function when merged
l
o
cus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama
M
enda
making
s
ure plant hait ter
m
s are found
commit
|
commitdiff
|
tree
2011-10-12
Naama Menda
l
oo
k
i
n
g at
d
i
rec
t
chi
l
d terms
for qualitative terms
commit
|
commitdiff
|
tree
2011-10-11
Naama Menda
loading qualitat
i
ve terms correct
l
y
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma Me
n
d
a
add
i
ng
unit ontolo
g
y cvterm
s
t
o
the phenotyeps
commit
|
commitdiff
|
tree
2011-10-03
Naama Men
d
a
just war
n
ing if pare
n
t
stock is not found
commit
|
commitdiff
|
tree
2011-10-03
N
aama Menda
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
p
a
rs
i
ng
m
o
re o
p
t
i
o
ns
f
o
r
solc
a
p image f
i
l
e
s
commit
|
commitdiff
|
tree
2011-10-02
N
aama
M
enda
fi
n
d
the ye
a
r of the
p
roect from
t
he metadat
a
file
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
year sh
o
uld be a property
of the project
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
searcg i
s
bet
t
er t
h
a
n
find here
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
N
a
a
m
a Menda
skipping for non-e
x
isti
n
g plots
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
checking correctly
if an ima
g
e is
l
oaded a
n
d if
was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Mend
a
typo
commit
|
commitdiff
|
tree
2011-09-27
N
aama Menda
better p
r
int
i
ng of error
m
essages
commit
|
commitdiff
|
tree
2011-09-27
Na
a
ma Men
d
a
added a check for
e
xisting stock-image l
i
nks
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
last typo?
commit
|
commitdiff
|
tree
2011-09-23
N
a
ama M
e
nda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama
M
enda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Men
d
a
added excepti
o
n for planting date property
commit
|
commitdiff
|
tree
2011-09-23
Naama
M
enda
added year optio
n
f
or find
i
ng
u
niq
u
e plot names
commit
|
commitdiff
|
tree
2011-09-18
N
aama Menda
sett
i
ng
the
tr
a
nsactio
n
proper
l
y
commit
|
commitdiff
|
tree
2011-09-18
Naama M
e
nda
checking if a synonym value was already lo
a
ded
commit
|
commitdiff
|
tree
2011-09-17
Naa
m
a Menda
l
o
ader for
solcap images
commit
|
commitdiff
|
tree
2011-09-17
Naama Men
d
a
us
i
n
g
txn_do
for the
transaction
commit
|
commitdiff
|
tree
2011-09-16
Naama Menda
m
o
dified optio
n
s for loa
d
i
n
g
solcap
T
A
data
commit
|
commitdiff
|
tree
2011-09-16
N
a
ama Menda
adde
d
par
s
i
n
g of qualitative traits into the tomato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naa
m
a Me
n
d
a
fix
e
d loadi
n
g stock owner into the right place
commit
|
commitdiff
|
tree
2011-09-14
N
aama Menda
no n
e
ed to clone the dbh
commit
|
commitdiff
|
tree
2011-09-14
N
a
ama
Men
d
a
added missin
g
phenome DBIC clas
s
es
commit
|
commitdiff
|
tree
2011-09-14
N
aama Menda
using CXGN::Phenome::Schema for
c
hecking/inse
r
ting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
removed
o
utdated
loading
scrip
t
commit
|
commitdiff
|
tree
2011-09-14
N
a
a
m
a Me
n
d
a
updated script for lo
a
ding solcap accessions
commit
|
commitdiff
|
tree
2011-09-14
Na
a
ma Me
n
da
updated CXGN::Phenome:
:
Schema classe
s
commit
|
commitdiff
|
tree
2011-09-13
Naa
m
a
Me
n
da
t
y
p
o
commit
|
commitdiff
|
tree
2011-09-04
Naama
M
en
d
a
loading script f
o
r SolCA
P
potato im
a
ge
s
commit
|
commitdiff
|
tree
2011-09-02
Naa
m
a Mend
a
loder
for i
m
a
ges fr
o
m Sandy
K
napp
commit
|
commitdiff
|
tree
2011-08-31
Naama
M
enda
adding da
t
e prop to experiments
commit
|
commitdiff
|
tree
2011-08-28
N
a
ama Me
n
da
loadin
g
script for
potato solcap data
.
H
o
pefully ne
x
t
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
Naama Menda
l
o
ader for TAIR loci
commit
|
commitdiff
|
tree
2011-06-19
N
a
a
m
a Menda
updated solcap st
u
ff for reloa
d
ing the potato 2009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
Naa
m
a M
e
n
d
a
patch for change
s
in Chado ND
s
c
he
m
a
commit
|
commitdiff
|
tree
2011-04-22
Naama Menda
db patch for g
r
anting delete on meta
d
at
a
to web_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama
M
enda
u
p
date
d
DBI
x
c
lasses
,
n
o more phenome
.
p
henotype t
a
ble
commit
|
commitdiff
|
tree
2011-04-18
N
a
ama Menda
s
k
ip
p
in
g
metadata insert if
o
ne of the FKs is n
u
l
l
commit
|
commitdiff
|
tree
2011-04-17
Naam
a
M
e
nda
adding web_usr
permis
s
ions to me
t
a
data t
a
ble
commit
|
commitdiff
|
tree
2011-04-17
Naa
m
a
Menda
typ
o
in query
commit
|
commitdiff
|
tree
2011-04-17
Naama Menda
forgot
to add web_usr permissi
o
n
s
commit
|
commitdiff
|
tree
2011-04-17
Na
a
m
a Menda
using s
t
ock_allele and st
o
ck_image instead of s
t
ock
p
rop
commit
|
commitdiff
|
tree
2011-04-16
Naama
M
e
n
da
d
b patch for migr
a
ting stock i
m
age, allele,
and o
w
ner
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama Menda
refactoring fu
n
ctio
n
s
t
h
at use individuals
.
Now
w
e
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
N
aama Menda
ty
p
os
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
de
l
eting first exis
t
ing allele l
i
nks
commit
|
commitdiff
|
tree
2011-04-01
N
a
a
m
a Menda
db pat
c
h for correctl
y
storing all alleles linked with
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
N
a
a
ma Menda
selecting al
l
allele
s
, inc
l
udin
g
def
a
ults ones
commit
|
commitdiff
|
tree
2011-04-01
N
aama Menda
removed
searching
loc
i
by stock phe
n
otypes
.
To do t
h
is
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama
M
enda
added an option
t
o pass the image
_
path
.
this lets r
u
n
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
Na
a
ma Menda
forgot t
o
allow d
u
pli
c
ate values
.
Without this multiple
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Mend
a
po
l
ished
l
o
ading scrip
t
f
o
r lycotill imag
e
s
commit
|
commitdiff
|
tree
2011-03-28
Naama Me
n
d
a
loading scrip
t
for lycotill accession
s
commit
|
commitdiff
|
tree
2011-03-23
Na
a
ma Men
d
a
d
bpat
c
h for fixing lo
c
us_mar
k
er FK
commit
|
commitdiff
|
tree
2011-03-22
Naa
m
a Menda
ad
d
ed an interim fun
c
tion for g
e
tting population object
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
Naama Menda
d
b p
a
tch for moving stock annotations from sto
c
k_dbxref
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama Menda
added missing dep
e
ndency
to db pathc
commit
|
commitdiff
|
tree
2011-03-09
Naama Menda
silly typo in dbpatch
commit
|
commitdiff
|
tree
2011-03-09
Naama Menda
db p
a
tch for the missing li
n
k
t
o
s
tock_id from the
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
Naama
Menda
silly
t
ypo
commit
|
commitdiff
|
tree
2011-03-03
Naama M
e
n
d
a
fi
x
e
d
l
oading experiment
ids for
each stoc
k
phenotyped
commit
|
commitdiff
|
tree
2011-02-07
Naama Menda
db path f
o
r a
d
ding und
e
f option
to a
l
lele mode_of
_
inheritanc
.
.
.
commit
|
commitdiff
|
tree
2010-12-08
Naama Men
d
a
fi
l
ter
i
ng obsole
t
e loc
i
and
non-curre
n
t unigen
e
s
commit
|
commitdiff
|
tree
2010-12-01
Naama Menda
patch
f
or updating the u
n
iqu
e
const
r
ain
t
on nd_e
x
periment_ph
.
.
.
commit
|
commitdiff
|
tree
2010-11-24
Naama Me
n
da
updating
chromosome number for loci
w
i
th itag matches
commit
|
commitdiff
|
tree
2010-11-24
Naama Menda
fixed t
y
pos in d
b
p
atch
commit
|
commitdiff
|
tree
2010-11-24
Naama
M
enda
setting i
t
ag synonym p
r
eferred=
f
commit
|
commitdiff
|
tree
2010-11-24
Naama Me
n
da
loa
d
i
ng script for ITAG2 - loci matches
commit
|
commitdiff
|
tree
2010-11-24
Naama
M
enda
g
o
t
r
i
d
of more last_in
s
ert_id calling
commit
|
commitdiff
|
tree
2010-11-24
Naama Menda
getting
r
id
of s
i
lly
last_insert_id
commit
|
commitdiff
|
tree
2010-11-05
Naama Menda
a
n
oth
e
r fix for query returning database
i
d
commit
|
commitdiff
|
tree
2010-11-05
Naama Menda
f
i
x
ed insert
queries to retur
n
the datab
a
se id
,
since
.
.
.
commit
|
commitdiff
|
tree
2010-11-05
Naama Menda
f
ixed
a bug in ge
t
ting d
a
taba
s
e i
d
a
fter an ins
e
r
t
commit
|
commitdiff
|
tree
2010-11-03
Naa
m
a Mend
a
updated
version
f
o
r BCS requ
i
r
e
d for Phenome
commit
|
commitdiff
|
tree
2010-11-01
Naama Menda
r
e
pl
a
ced find with create_with for a
c
cession cvterm
commit
|
commitdiff
|
tree
2010-10-29
Naama Menda
a
d
de
d
st
o
ck_dbxrefpro
p
table to db patch
.
commit
|
commitdiff
|
tree
2010-10-29
Naama Menda
forgot to use T
r
y::Ti
n
y
commit
|
commitdiff
|
tree
2010-10-29
Naa
m
a Menda
typo
commit
|
commitdiff
|
tree
2010-10-29
N
a
ama M
e
nda
fi
x
ed p
o
pu
l
ation upda
t
e
f
u
nct
i
on
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Menda
db pat
c
hes should work ri
g
ht now, wit
h
loa
d
ing stock_id
.
.
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Mend
a
for
g
eot to get rid
o
f ST
D
ERR printing
commit
|
commitdiff
|
tree
2010-10-28
Naama Men
d
a
added
d
b_pathce
s
req
u
ire
d
to Build
.
PL
commit
|
commitdiff
|
tree
next