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added locus field to the search
2011-11-15
Naama
Menda
added locus fie
l
d t
o
the s
e
a
r
c
h
commit
|
commitdiff
|
tree
2011-11-15
Naama Men
d
a
a
d
ding disconnect for dbh wi
t
h
out autocom
m
it
commit
|
commitdiff
|
tree
2011-11-07
Naa
m
a
M
e
nda
a
dded accessors
f
o
r g
e
n
o
m
e
_locus name
field
commit
|
commitdiff
|
tree
2011-11-09
Na
a
ma Menda
disa
b
lin
g
aut
o
commit
commit
|
commitdiff
|
tree
2011-11-07
Naama
M
e
nda
patch for adding a
l
o
cus field to
the locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Me
n
da
adding phenoty
p
e
props
to so
l
cap p
h
e
n
otyp
e
s
commit
|
commitdiff
|
tree
2011-10-15
Naama
Men
d
a
obsoleting loc
u
s
alias if the ITAG id i
s
ju
s
t the al
i
a
s
commit
|
commitdiff
|
tree
2011-10-15
Naama
Menda
script for obsoleting I
T
AG loci
f
r
o
m
ph
e
nome
.
locus
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
removing trail
i
ng
spaces from unit name
commit
|
commitdiff
|
tree
2011-10-15
N
aama Menda
removing tra
i
l
i
n
g
s
pacesfromuni
t
name
commit
|
commitdiff
|
tree
2011-10-14
N
a
ama Menda
fixing bug
i
n
merge_locus
f
unction
w
hen merged l
o
cus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
Naama M
e
nda
making sure plant hait te
r
ms ar
e
found
commit
|
commitdiff
|
tree
2011-10-12
Naama Mend
a
looking at d
i
r
ect child
terms for qualitative ter
m
s
commit
|
commitdiff
|
tree
2011-10-11
Naama Me
n
d
a
l
o
ading qualitative terms c
o
rre
c
tly
commit
|
commitdiff
|
tree
2011-10-11
Na
a
ma M
e
nda
adding unit on
t
o
logy
c
v
term
s
to th
e
phenotyeps
commit
|
commitdiff
|
tree
2011-10-03
Naa
m
a M
e
nda
just
w
arnin
g
i
f
pa
r
ent stock is n
o
t f
o
und
commit
|
commitdiff
|
tree
2011-10-03
Naama
M
e
nda
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama Menda
parsing
more options f
o
r solcap i
m
ag
e
files
commit
|
commitdiff
|
tree
2011-10-02
Naama Mend
a
find the year o
f
the proec
t
from the
m
et
a
data file
commit
|
commitdiff
|
tree
2011-10-02
Naam
a
Menda
y
ear
should
b
e a
p
rop
e
rty of the project
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
searc
g
is bett
e
r than find h
e
r
e
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
ty
p
o
commit
|
commitdiff
|
tree
2011-09-27
Naama Me
n
d
a
skipping for
n
o
n-ex
i
s
t
ing
p
lots
commit
|
commitdiff
|
tree
2011-09-27
Naama Mend
a
checking corre
c
t
l
y if an i
m
age is loa
d
ed and if was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
ty
p
o
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
better printi
n
g
of error mes
s
ages
commit
|
commitdiff
|
tree
2011-09-27
N
a
am
a
Me
n
da
added a check for existing s
t
ock-image links
commit
|
commitdiff
|
tree
2011-09-23
Naa
m
a
Menda
las
t
typo?
commit
|
commitdiff
|
tree
2011-09-23
Naama M
e
n
da
ty
p
o
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
added excepti
o
n for planti
n
g date property
commit
|
commitdiff
|
tree
2011-09-23
Naama
Mend
a
added year opt
i
o
n for find
i
n
g unique plot n
a
m
es
commit
|
commitdiff
|
tree
2011-09-18
N
aama Menda
set
t
ing the transact
i
on p
r
op
e
rly
commit
|
commitdiff
|
tree
2011-09-18
N
aama Menda
checkin
g
if a synonym value
w
as
a
lr
e
ady loaded
commit
|
commitdiff
|
tree
2011-09-17
Naama Menda
lo
a
d
e
r
fo
r
s
o
l
c
a
p images
commit
|
commitdiff
|
tree
2011-09-17
Naama Menda
using txn_do f
o
r t
h
e transac
t
ion
commit
|
commitdiff
|
tree
2011-09-16
Naama M
e
nda
modified options for loading so
l
cap TA dat
a
commit
|
commitdiff
|
tree
2011-09-16
Naa
m
a M
e
nda
added par
s
ing o
f
qualitative traits in
t
o t
h
e tomato
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naama Menda
fixed loading stock own
e
r i
n
to the right place
commit
|
commitdiff
|
tree
2011-09-14
N
aama Menda
no
n
e
e
d to c
l
one
t
he dbh
commit
|
commitdiff
|
tree
2011-09-14
N
a
ama Me
n
d
a
adde
d
missi
n
g p
h
e
n
o
me
D
BIC classes
commit
|
commitdiff
|
tree
2011-09-14
Naama Men
d
a
using CXGN::Phenome
:
:Schema for ch
e
cking/inserting
.
.
.
commit
|
commitdiff
|
tree
2011-09-14
Naa
m
a Menda
remov
e
d
o
u
t
da
t
ed lo
a
d
i
n
g script
commit
|
commitdiff
|
tree
2011-09-14
Naama M
e
nda
updated
script f
o
r loading so
l
cap accessions
commit
|
commitdiff
|
tree
2011-09-14
Naama
M
e
nda
updated CXGN::Phenome::Schema
c
lasses
commit
|
commitdiff
|
tree
2011-09-13
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-04
N
aama Menda
load
i
n
g
s
c
r
i
p
t
for SolCAP potato i
m
a
g
es
commit
|
commitdiff
|
tree
2011-09-02
Naama
Menda
loder for imag
e
s from Sandy
Knapp
commit
|
commitdiff
|
tree
2011-08-31
Naama Menda
adding da
t
e pr
o
p to exper
i
me
n
ts
commit
|
commitdiff
|
tree
2011-08-28
Naama M
e
nda
loading sc
r
ipt
for potato solc
a
p data
.
Hop
e
fully next
.
.
.
commit
|
commitdiff
|
tree
2011-08-25
N
a
a
ma Menda
loader
f
or TAIR loci
commit
|
commitdiff
|
tree
2011-06-19
Naama Menda
updated solc
a
p s
t
uff for reloading
t
he po
t
a
to
2
009
.
.
.
commit
|
commitdiff
|
tree
2011-05-09
N
a
a
m
a Menda
pa
t
ch for chan
g
es in
C
hado ND schema
commit
|
commitdiff
|
tree
2011-04-22
Naama Menda
d
b
patch fo
r
granting delete on
m
e
t
a
d
a
ta t
o
web_usr
.
.
.
commit
|
commitdiff
|
tree
2011-04-21
Naama Mend
a
up
d
at
e
d DBIx classes , no more phenome
.
p
h
enotype table
commit
|
commitdiff
|
tree
2011-04-18
Naama
M
enda
skipping metadata ins
e
rt if
on
e
of
t
h
e FKs is null
commit
|
commitdiff
|
tree
2011-04-17
Naama M
e
nda
adding
web_usr
p
ermissions
to metadata tabl
e
commit
|
commitdiff
|
tree
2011-04-17
N
aama Menda
typo
i
n query
commit
|
commitdiff
|
tree
2011-04-17
Naama Me
n
da
f
o
rgo
t
to add web_usr
permis
s
i
o
ns
commit
|
commitdiff
|
tree
2011-04-17
Na
a
ma
Menda
using st
o
ck_allel
e
a
n
d stock
_
image
i
nstead of stockprop
commit
|
commitdiff
|
tree
2011-04-16
Naama Men
d
a
db
pa
t
ch
f
or m
i
grating
stoc
k
image, allele, and
owner
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naama Mend
a
refactori
n
g function
s
that use indi
v
iduals
.
Now
w
e
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Men
d
a
typos
commit
|
commitdiff
|
tree
2011-04-01
Naa
m
a Me
n
da
d
e
leting
f
irst exist
i
ng allele links
commit
|
commitdiff
|
tree
2011-04-01
N
a
ama Menda
db patch for c
o
rrectly s
t
oring all all
e
les linked with
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
selecting all allel
e
s, including defa
u
l
t
s
ones
commit
|
commitdiff
|
tree
2011-04-01
Naama Menda
r
e
moved searching
l
oci by stock phenoty
p
es
.
To do this
.
.
.
commit
|
commitdiff
|
tree
2011-04-02
Naa
m
a
M
enda
added an option to
pas
s
th
e
image_path
.
this lets run
.
.
.
commit
|
commitdiff
|
tree
2011-03-29
N
a
ama
Menda
forg
o
t to allow duplicate v
a
l
u
e
s
.
Wit
h
out thi
s
multiple
.
.
.
commit
|
commitdiff
|
tree
2011-04-01
Naama
M
enda
polished
l
oading script for ly
c
otill
images
commit
|
commitdiff
|
tree
2011-03-28
Naama Menda
loading script for lycotill accessions
commit
|
commitdiff
|
tree
2011-03-23
Na
a
ma Menda
d
b
p
atch f
o
r fixi
n
g loc
u
s_marker
FK
commit
|
commitdiff
|
tree
2011-03-22
N
a
ama Me
n
da
added
an interi
m
function for
getting populat
i
on object
.
.
.
commit
|
commitdiff
|
tree
2011-03-17
Naama
M
enda
db p
a
tch
for movin
g
stock annotations from stock_dbxref
.
.
.
commit
|
commitdiff
|
tree
2011-03-10
Naama
Me
n
da
added missi
n
g depend
e
n
c
y
t
o
d
b
path
c
commit
|
commitdiff
|
tree
2011-03-09
Naama Menda
silly
typo in
d
bp
a
tch
commit
|
commitdiff
|
tree
2011-03-09
Naam
a
Menda
db pa
t
ch for the missing
l
i
nk to
st
o
ck_
i
d from the
.
.
.
commit
|
commitdiff
|
tree
2011-03-04
N
a
ama Menda
silly
typo
commit
|
commitdiff
|
tree
2011-03-03
Naama Menda
fixed loa
d
ing e
x
per
i
men
t
ids f
o
r each sto
c
k p
h
enoty
p
ed
commit
|
commitdiff
|
tree
2011-02-07
Naama
M
enda
db path for adding unde
f
option to allele mode_
o
f
_inherit
a
nc
.
.
.
commit
|
commitdiff
|
tree
2010-12-08
Naama Menda
filteri
n
g o
b
sole
t
e loci
a
nd non
-
curren
t
unigene
s
commit
|
commitdiff
|
tree
2010-12-01
N
aama M
e
n
da
patc
h
for u
p
da
t
ing the unique co
n
straint
on nd
_
e
x
peri
m
ent_ph
.
.
.
commit
|
commitdiff
|
tree
2010-11-24
Naama M
e
nda
updating chromosome number for loci w
i
t
h itag matches
commit
|
commitdiff
|
tree
2010-11-24
Naama
Menda
fixed typos in db patch
commit
|
commitdiff
|
tree
2010-11-24
Naama Menda
setting itag synonym
p
referred=f
commit
|
commitdiff
|
tree
2010-11-24
Naama Menda
l
oad
i
ng script for ITAG2
-
loci matches
commit
|
commitdiff
|
tree
2010-11-24
Naama Menda
got
r
id of
more l
a
st_
i
nse
r
t_id
calli
n
g
commit
|
commitdiff
|
tree
2010-11-24
Naama Menda
getting r
i
d of silly last_in
s
ert
_
id
commit
|
commitdiff
|
tree
2010-11-05
Naama M
e
nda
another fix for query returning database id
commit
|
commitdiff
|
tree
2010-11-05
Naama Menda
f
i
xed in
s
ert
queries to
retu
r
n
the database id, sinc
e
.
.
.
commit
|
commitdiff
|
tree
2010-11-05
Naama Menda
fixe
d
a
b
ug
in get
t
ing d
a
taba
s
e id after
an inse
r
t
commit
|
commitdiff
|
tree
2010-11-03
Naama Menda
update
d
v
e
r
si
o
n
for BCS required for Phenome
commit
|
commitdiff
|
tree
2010-11-01
Naama Menda
repla
c
ed find with creat
e
_wit
h
for
a
ccess
i
on cvt
e
rm
commit
|
commitdiff
|
tree
2010-10-29
Naama Menda
added stock_dbxref
p
rop ta
b
l
e
to
d
b patch
.
commit
|
commitdiff
|
tree
2010-10-29
Naama Menda
forg
o
t to use Try
:
:Tiny
commit
|
commitdiff
|
tree
2010-10-29
Naama Menda
typo
commit
|
commitdiff
|
tree
2010-10-29
N
aama Menda
fi
x
e
d population up
d
ate function
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Menda
db patches
s
hould
w
ork
r
ight
now, with loading sto
c
k
_
id
.
.
.
commit
|
commitdiff
|
tree
2010-10-28
Naama Menda
f
orgeot
t
o
g
et rid of STDERR printi
n
g
commit
|
commitdiff
|
tree
2010-10-28
Naa
m
a Men
d
a
added db_path
c
es re
q
uired
to Bu
i
l
d
.
PL
commit
|
commitdiff
|
tree
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