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fix preferred IITA accession names
2014-03-27
N
a
a
m
a
fix preferred IITA accessio
n
na
m
e
s
commit
|
commitdiff
|
tree
2014-03-14
N
a
ama Menda
c
o
rrect documentation for storing terms with a months
.
.
.
commit
|
commitdiff
|
tree
2014-02-04
N
a
a
ma
che
c
k
first for cor
r
ect options
commit
|
commitdiff
|
tree
2014-01-21
Naama Menda
fix documentation for loading snp fil
e
s
commit
|
commitdiff
|
tree
2013-07-18
n
m
enda
e
xclude obsolete annotations by
l
o
oking
a
t locus
_
dbxref_evidence
commit
|
commitdiff
|
tree
2013-07-17
nmenda
r
efine e
r
r
o
r messages
commit
|
commitdiff
|
tree
2013-06-25
N
a
ama Menda
root term for
plant_anatomy has ch
a
n
g
ed si
n
c
e
we la
s
t
.
.
.
commit
|
commitdiff
|
tree
2013-06-24
Naa
m
a M
e
nda
not a good idea to automatically upd
a
te obsolete
terms
.
.
.
commit
|
commitdiff
|
tree
2013-06-24
N
a
ama M
e
nd
a
up
d
ated co
d
e for flagging obsolete annotations,
s
ince
.
.
.
commit
|
commitdiff
|
tree
2013-06-16
Naama M
e
nda
p
r
int debugging info when
p
a
rents ar
e
sto
r
ed
commit
|
commitdiff
|
tree
2013-06-16
Naam
a
M
enda
cleaning clone names
in th
e
l
o
ading script
commit
|
commitdiff
|
tree
2013-06-09
Na
a
ma Menda
remove leading a
n
d trailing spac
e
s
f
rom all loc
u
s
s
e
arhc
.
.
.
commit
|
commitdiff
|
tree
2013-04-13
Naama Menda
d
ebug
info abou
t
loadi
n
g o
f
pl
o
t s
t
ocks
commit
|
commitdiff
|
tree
2013-04-13
N
a
ama Menda
ad
d
pro
j
e
ct nam
e
and
year options
commit
|
commitdiff
|
tree
2013-04-13
N
a
ama Me
n
d
a
s
n
p load
e
r
c
reat
e
s now new sto
c
ks
i
f not found in db
commit
|
commitdiff
|
tree
2013-04-12
N
a
ama Me
n
d
a
add code
f
r
o
m
merge
commit
|
commitdiff
|
tree
2013-04-12
Naa
m
a Menda
re
s
olved con
f
lict
commit
|
commitdiff
|
tree
2013-04-12
Naa
m
a Menda
support for mu
l
tilocation fi
l
es
commit
|
commitdiff
|
tree
2013-04-07
Naama
Mend
a
refi
n
ing
clone name sear
c
h
commit
|
commitdiff
|
tree
2013-04-07
Naama Me
n
da
skipp
i
ng
n
on-n
u
m
eric va
l
u
e
s
commit
|
commitdiff
|
tree
2013-04-07
Naam
a
Menda
change su
r
viving pl
a
n
t
s co
l
u
m
n
header
commit
|
commitdiff
|
tree
2013-04-06
Naama Menda
loader base
d
on NRCR
I
data
.
Shoul
d
wor
k
with other
.
.
.
commit
|
commitdiff
|
tree
2013-04-06
Naama Menda
typo
commit
|
commitdiff
|
tree
2013-04-06
N
a
a
ma Menda
merged changes
commit
|
commitdiff
|
tree
2013-04-06
Naama Mend
a
loader fo
r
ca
s
sava pro
j
ects
a
nd
their metadata
commit
|
commitdiff
|
tree
2013-03-30
Naama Menda
l
oader for cassava c
l
ones and syn
o
nyms
commit
|
commitdiff
|
tree
2013-03-28
N
a
ama Menda
refined opti
o
ns
f
or lo
a
ding solcap data
commit
|
commitdiff
|
tree
2012-11-29
Naa
m
a
Mend
a
p
r
i
n
t sho
r
ter
mini-ref
commit
|
commitdiff
|
tree
2012-11-29
Na
a
ma Menda
reference_id in locusgro
u
p_m
e
m
b
e
r is a dbxref
commit
|
commitdiff
|
tree
2012-11-28
Naama
Menda
cxg
n
members returns a data
structure wit
h
t
he locus
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama Menda
f
unction for returning the seco
n
d
level
o
bject of locusgro
u
p
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Naama
M
enda
op
t
i
o
n for
p
a
ssing
l
ocus
g
roup
_
name as an a
r
g for ch
e
c
k
ing
.
.
.
commit
|
commitdiff
|
tree
2012-11-05
Naama Menda
tgrc wil
d
access
i
o
n
s
commit
|
commitdiff
|
tree
2012-11-05
Naama Menda
loader for tgrc
wil
d
a
ccession
s
commit
|
commitdiff
|
tree
2012-11-04
Naama M
e
nda
cassava and bar
l
ey
l
oader
s
commit
|
commitdiff
|
tree
2012-11-03
Naama Menda
Merge branch 'master'
o
f github
.
com
:
s
o
lgeno
m
i
c
s/Phenome
commit
|
commitdiff
|
tree
2012-11-03
N
a
ama Menda
corr
e
c
t
tab-d
e
limited
format
commit
|
commitdiff
|
tree
2012-10-31
Naama Men
d
a
population
should be
for
m
utat
n
s
commit
|
commitdiff
|
tree
2012-10-31
N
a
a
ma Mend
a
loader
f
or
the Tsukuba mutan
t
s
commit
|
commitdiff
|
tree
2012-10-04
N
aama Menda
t
weak
sca
l
e
cvtermprop loadin
g
script
commit
|
commitdiff
|
tree
2012-05-02
Naama
Menda
a
dd updating of g
e
nome locus identifier, d
e
scription
.
.
.
commit
|
commitdiff
|
tree
2012-04-26
Naama Menda
add
a
user name option
commit
|
commitdiff
|
tree
2012-04-18
Naama Menda
t
ypo
commit
|
commitdiff
|
tree
2012-04-18
Naam
a
Menda
added a check
f
o
r
stock_
o
w
n
er row
commit
|
commitdiff
|
tree
2012-04-17
N
a
ama Menda
corrected loader for cassava
p
h
e
notypin
g
proje
c
ts
commit
|
commitdiff
|
tree
2012-04-17
N
a
a
m
a Menda
corrected loader for c
a
ssava pheno
t
yping pr
o
ject
s
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
erro
r
in fetc
h
i
n
g
d
bxr
e
f
acc
e
ssion for
a
pub object
commit
|
commitdiff
|
tree
2012-03-15
Naama Menda
modi
f
i
ed
onto
l
ogy assoc
i
at
i
on script t
o
work with s
t
ocks
.
.
.
commit
|
commitdiff
|
tree
2012-03-03
Naam
a
M
enda
up
d
at
e
d dump scrip
t
.
Mak
e
this a cron job
.
.
commit
|
commitdiff
|
tree
2012-01-11
Naama Menda
removing vers
i
on nu
m
bers from
S
olyc gene
ids
commit
|
commitdiff
|
tree
2012-01-09
Naa
m
a
Menda
m
oved the
g
enotype json to
genotyepprop
commit
|
commitdiff
|
tree
2012-01-06
Naama
Menda
script fo
r
reloading t
h
e solcap snp positions as de
s
ignated
.
.
.
commit
|
commitdiff
|
tree
2011-12-23
Na
a
ma Menda
l
oader f
o
r
solcap
Infinium
a
rray
s
np genotypes
commit
|
commitdiff
|
tree
2011-12-20
Naama Menda
fixed typos
commit
|
commitdiff
|
tree
2011-12-18
Naama Menda
loader
for the cass
a
v
a
phenotypes
commit
|
commitdiff
|
tree
2011-12-17
Naama Menda
silly typo
commit
|
commitdiff
|
tree
2011-12-16
Naama Menda
p
o
lish
i
ng
scrip
t
for ins
e
rting/upda
t
in
g
p
o
tat
o
loci
.
.
.
commit
|
commitdiff
|
tree
2011-12-15
Naama
Menda
loade
r
for the
p
ot
a
to
genome lo
c
i
commit
|
commitdiff
|
tree
2011-12-15
Naam
a
Me
n
d
a
prin
t
in
g
to a large s
e
que
n
ce file
commit
|
commitdiff
|
tree
2011-12-14
Naama
Menda
fixed fetching of Solyc mrna
seque
n
ces
commit
|
commitdiff
|
tree
2011-12-14
Naama
M
e
nd
a
adding
it
a
g
mrna sequences to
loci bla
s
t db
commit
|
commitdiff
|
tree
2011-11-23
N
aama Menda
f
ixed cvterm
n
a
me
f
or
plot and member stock relat
i
o
nship
.
.
.
commit
|
commitdiff
|
tree
2011-11-22
Naama Mend
a
capitalizing Qu
a
lity term
commit
|
commitdiff
|
tree
2011-11-22
Na
a
ma
Me
n
da
refining add_uni
g
ene
m
ethod
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
Mer
g
e b
r
anch 'master' into topic/lo
c
us_c
o
ntroller
commit
|
commitdiff
|
tree
2011-11-16
Naama Menda
m
issing
b
ind
val
u
e
commit
|
commitdiff
|
tree
2011-11-15
Na
a
ma Me
n
da
added locus
field to the search
commit
|
commitdiff
|
tree
2011-11-15
Naama Me
n
da
adding dis
c
onn
e
ct for dbh withou
t
a
ut
o
co
m
mi
t
commit
|
commitdiff
|
tree
2011-11-08
Naama Menda
update DBIx::Class phenom
e
s
chema classes
commit
|
commitdiff
|
tree
2011-11-07
Naama Menda
Merge branch
'
master
'
into topic/locus
_
controll
e
r
commit
|
commitdiff
|
tree
2011-11-07
N
a
ama Menda
res
o
lved
confl
i
c
t
commit
|
commitdiff
|
tree
2011-11-07
N
a
ama
M
enda
add
e
d accesso
r
s for g
e
nome
_
locus name field
commit
|
commitdiff
|
tree
2011-11-09
Naama Menda
di
s
abl
i
ng auto
c
ommit
commit
|
commitdiff
|
tree
2011-11-07
N
aama
Menda
patch
f
or adding a locus field to
t
he locus table
.
.
.
.
commit
|
commitdiff
|
tree
2011-11-06
Naama Menda
a
d
di
n
g phenot
y
pe props to solcap phenotypes
commit
|
commitdiff
|
tree
2011-10-30
N
aama Men
d
a
using db
c
-
>
dbh i
n
stead of CXGM::DB::
C
o
n
nection
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
obsoleti
n
g loc
u
s alia
s
if the ITAG id i
s
j
u
st the alias
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
s
cript for o
b
s
oleting
ITAG loci from p
h
enome
.
loc
u
s
commit
|
commitdiff
|
tree
2011-10-15
Naama Mend
a
removing trailing spaces
f
rom unit name
commit
|
commitdiff
|
tree
2011-10-15
Naama Menda
r
emov
i
n
g trailing s
p
acesfromunit name
commit
|
commitdiff
|
tree
2011-10-14
Naama Menda
fix
i
ng bug in merge_locus
function when
m
erged locus
.
.
.
commit
|
commitdiff
|
tree
2011-10-12
N
a
ama Menda
making
s
ure pl
a
nt hait terms are found
commit
|
commitdiff
|
tree
2011-10-12
Naama Me
n
da
looki
n
g a
t
direct chil
d
terms for quali
t
ative terms
commit
|
commitdiff
|
tree
2011-10-11
Naa
m
a Menda
lo
a
ding quali
t
ative terms corre
c
t
l
y
commit
|
commitdiff
|
tree
2011-10-11
N
aama
M
e
nda
a
d
ding unit ontolog
y
cvterms to
the phenotyeps
commit
|
commitdiff
|
tree
2011-10-03
Na
a
ma Men
d
a
j
ust warning
if
p
arent
s
t
o
ck is not f
o
und
commit
|
commitdiff
|
tree
2011-10-03
Naa
m
a
Menda
typo
commit
|
commitdiff
|
tree
2011-10-03
Naama
M
e
n
d
a
parsing more optio
n
s for
s
olcap image files
commit
|
commitdiff
|
tree
2011-10-02
N
a
ama
Menda
find the year of the pro
e
c
t
fr
o
m
the m
e
tadata f
i
le
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
year should be a property
of the project
commit
|
commitdiff
|
tree
2011-10-02
Naama Menda
sea
r
cg is better than f
i
nd here
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
typo
commit
|
commitdiff
|
tree
2011-09-27
Naama M
e
nda
s
kipping for
non-exi
s
ting plots
commit
|
commitdiff
|
tree
2011-09-27
N
a
ama Menda
checking correctly if an
image is
loaded and if was
.
.
.
commit
|
commitdiff
|
tree
2011-09-27
N
aama Me
n
da
t
y
po
commit
|
commitdiff
|
tree
2011-09-27
Naama Men
d
a
better pri
n
ti
n
g of
err
o
r messages
commit
|
commitdiff
|
tree
2011-09-27
Naama Menda
added
a check for existing
stoc
k
-
i
m
age links
commit
|
commitdiff
|
tree
2011-09-23
Naam
a
Menda
last
typo?
commit
|
commitdiff
|
tree
2011-09-23
N
a
ama Menda
t
y
p
o
commit
|
commitdiff
|
tree
2011-09-23
Naama Menda
typo
commit
|
commitdiff
|
tree
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