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2013-07-18	nmenda	exclude obsolete annotations by looking at locus_dbxref_evidence	commit \| commitdiff \| tree
2013-07-17	nmenda	refine error messages	commit \| commitdiff \| tree
2013-06-25	Naama Menda	root term for plant_anatomy has changed since we last...	commit \| commitdiff \| tree
2013-06-24	Naama Menda	not a good idea to automatically update obsolete terms...	commit \| commitdiff \| tree
2013-06-24	Naama Menda	updated code for flagging obsolete annotations, since...	commit \| commitdiff \| tree
2013-06-16	Naama Menda	print debugging info when parents are stored	commit \| commitdiff \| tree
2013-06-16	Naama Menda	cleaning clone names in the loading script	commit \| commitdiff \| tree
2013-06-09	Naama Menda	remove leading and trailing spaces from all locus searhc...	commit \| commitdiff \| tree
2013-04-13	Naama Menda	debug info about loading of plot stocks	commit \| commitdiff \| tree
2013-04-13	Naama Menda	add project name and year options	commit \| commitdiff \| tree
2013-04-13	Naama Menda	snp loader creates now new stocks if not found in db	commit \| commitdiff \| tree
2013-04-12	Naama Menda	add code from merge	commit \| commitdiff \| tree
2013-04-12	Naama Menda	resolved conflict	commit \| commitdiff \| tree
2013-04-12	Naama Menda	support for multilocation files	commit \| commitdiff \| tree
2013-04-07	Naama Menda	refining clone name search	commit \| commitdiff \| tree
2013-04-07	Naama Menda	skipping non-numeric values	commit \| commitdiff \| tree
2013-04-07	Naama Menda	change surviving plants column header	commit \| commitdiff \| tree
2013-04-06	Naama Menda	loader based on NRCRI data. Should work with other...	commit \| commitdiff \| tree
2013-04-06	Naama Menda	typo	commit \| commitdiff \| tree
2013-04-06	Naama Menda	merged changes	commit \| commitdiff \| tree
2013-04-06	Naama Menda	loader for cassava projects and their metadata	commit \| commitdiff \| tree
2013-03-30	Naama Menda	loader for cassava clones and synonyms	commit \| commitdiff \| tree
2013-03-28	Naama Menda	refined options for loading solcap data	commit \| commitdiff \| tree
2012-11-29	Naama Menda	print shorter mini-ref	commit \| commitdiff \| tree
2012-11-29	Naama Menda	reference_id in locusgroup_member is a dbxref	commit \| commitdiff \| tree
2012-11-28	Naama Menda	cxgn members returns a data structure with the locus...	commit \| commitdiff \| tree
2012-11-28	Naama Menda	function for returning the second level object of locusgroup...	commit \| commitdiff \| tree
2012-11-28	Naama Menda	option for passing locusgroup_name as an arg for checking...	commit \| commitdiff \| tree
2012-11-05	Naama Menda	tgrc wild accessions	commit \| commitdiff \| tree
2012-11-05	Naama Menda	loader for tgrc wild accessions	commit \| commitdiff \| tree
2012-11-04	Naama Menda	cassava and barley loaders	commit \| commitdiff \| tree
2012-11-03	Naama Menda	Merge branch 'master' of github.com:solgenomics/Phenome	commit \| commitdiff \| tree
2012-11-03	Naama Menda	correct tab-delimited format	commit \| commitdiff \| tree
2012-10-31	Naama Menda	population should be for mutatns	commit \| commitdiff \| tree
2012-10-31	Naama Menda	loader for the Tsukuba mutants	commit \| commitdiff \| tree
2012-10-04	Naama Menda	tweak scale cvtermprop loading script	commit \| commitdiff \| tree
2012-05-02	Naama Menda	add updating of genome locus identifier, description...	commit \| commitdiff \| tree
2012-04-26	Naama Menda	add a user name option	commit \| commitdiff \| tree
2012-04-18	Naama Menda	typo	commit \| commitdiff \| tree
2012-04-18	Naama Menda	added a check for stock_owner row	commit \| commitdiff \| tree
2012-04-17	Naama Menda	corrected loader for cassava phenotyping projects	commit \| commitdiff \| tree
2012-04-17	Naama Menda	corrected loader for cassava phenotyping projects	commit \| commitdiff \| tree
2012-03-15	Naama Menda	error in fetching dbxref accession for a pub object	commit \| commitdiff \| tree
2012-03-15	Naama Menda	modified ontology association script to work with stocks...	commit \| commitdiff \| tree
2012-03-03	Naama Menda	updated dump script. Make this a cron job ..	commit \| commitdiff \| tree
2012-01-11	Naama Menda	removing version numbers from Solyc gene ids	commit \| commitdiff \| tree
2012-01-09	Naama Menda	moved the genotype json to genotyepprop	commit \| commitdiff \| tree
2012-01-06	Naama Menda	script for reloading the solcap snp positions as designated...	commit \| commitdiff \| tree
2011-12-23	Naama Menda	loader for solcap Infinium array snp genotypes	commit \| commitdiff \| tree
2011-12-20	Naama Menda	fixed typos	commit \| commitdiff \| tree
2011-12-18	Naama Menda	loader for the cassava phenotypes	commit \| commitdiff \| tree
2011-12-17	Naama Menda	silly typo	commit \| commitdiff \| tree
2011-12-16	Naama Menda	polishing script for inserting/updating potato loci...	commit \| commitdiff \| tree
2011-12-15	Naama Menda	loader for the potato genome loci	commit \| commitdiff \| tree
2011-12-15	Naama Menda	printing to a large sequence file	commit \| commitdiff \| tree
2011-12-14	Naama Menda	fixed fetching of Solyc mrna sequences	commit \| commitdiff \| tree
2011-12-14	Naama Menda	adding itag mrna sequences to loci blast db	commit \| commitdiff \| tree
2011-11-23	Naama Menda	fixed cvterm name for plot and member stock relationship...	commit \| commitdiff \| tree
2011-11-22	Naama Menda	capitalizing Quality term	commit \| commitdiff \| tree
2011-11-22	Naama Menda	refining add_unigene method	commit \| commitdiff \| tree
2011-11-16	Naama Menda	Merge branch 'master' into topic/locus_controller	commit \| commitdiff \| tree
2011-11-16	Naama Menda	missing bind value	commit \| commitdiff \| tree
2011-11-15	Naama Menda	added locus field to the search	commit \| commitdiff \| tree
2011-11-15	Naama Menda	adding disconnect for dbh without autocommit	commit \| commitdiff \| tree
2011-11-08	Naama Menda	update DBIx::Class phenome schema classes	commit \| commitdiff \| tree
2011-11-07	Naama Menda	Merge branch 'master' into topic/locus_controller	commit \| commitdiff \| tree
2011-11-07	Naama Menda	resolved conflict	commit \| commitdiff \| tree
2011-11-07	Naama Menda	added accessors for genome_locus name field	commit \| commitdiff \| tree
2011-11-09	Naama Menda	disabling autocommit	commit \| commitdiff \| tree
2011-11-07	Naama Menda	patch for adding a locus field to the locus table....	commit \| commitdiff \| tree
2011-11-06	Naama Menda	adding phenotype props to solcap phenotypes	commit \| commitdiff \| tree
2011-10-30	Naama Menda	using dbc->dbh instead of CXGM::DB::Connection	commit \| commitdiff \| tree
2011-10-15	Naama Menda	obsoleting locus alias if the ITAG id is just the alias	commit \| commitdiff \| tree
2011-10-15	Naama Menda	script for obsoleting ITAG loci from phenome.locus	commit \| commitdiff \| tree
2011-10-15	Naama Menda	removing trailing spaces from unit name	commit \| commitdiff \| tree
2011-10-15	Naama Menda	removing trailing spacesfromunit name	commit \| commitdiff \| tree
2011-10-14	Naama Menda	fixing bug in merge_locus function when merged locus...	commit \| commitdiff \| tree
2011-10-12	Naama Menda	making sure plant hait terms are found	commit \| commitdiff \| tree
2011-10-12	Naama Menda	looking at direct child terms for qualitative terms	commit \| commitdiff \| tree
2011-10-11	Naama Menda	loading qualitative terms correctly	commit \| commitdiff \| tree
2011-10-11	Naama Menda	adding unit ontology cvterms to the phenotyeps	commit \| commitdiff \| tree
2011-10-03	Naama Menda	just warning if parent stock is not found	commit \| commitdiff \| tree
2011-10-03	Naama Menda	typo	commit \| commitdiff \| tree
2011-10-03	Naama Menda	parsing more options for solcap image files	commit \| commitdiff \| tree
2011-10-02	Naama Menda	find the year of the proect from the metadata file	commit \| commitdiff \| tree
2011-10-02	Naama Menda	year should be a property of the project	commit \| commitdiff \| tree
2011-10-02	Naama Menda	searcg is better than find here	commit \| commitdiff \| tree
2011-09-27	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-27	Naama Menda	skipping for non-existing plots	commit \| commitdiff \| tree
2011-09-27	Naama Menda	checking correctly if an image is loaded and if was...	commit \| commitdiff \| tree
2011-09-27	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-27	Naama Menda	better printing of error messages	commit \| commitdiff \| tree
2011-09-27	Naama Menda	added a check for existing stock-image links	commit \| commitdiff \| tree
2011-09-23	Naama Menda	last typo?	commit \| commitdiff \| tree
2011-09-23	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-23	Naama Menda	typo	commit \| commitdiff \| tree
2011-09-23	Naama Menda	added exception for planting date property	commit \| commitdiff \| tree
2011-09-23	Naama Menda	added year option for finding unique plot names	commit \| commitdiff \| tree
2011-09-18	Naama Menda	setting the transaction properly	commit \| commitdiff \| tree
2011-09-18	Naama Menda	checking if a synonym value was already loaded	commit \| commitdiff \| tree
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Scripts and libraries for managing the SGN Phenome database

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