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enabled GMX_PREFER_STATIC_LIBS CMake option for CYGWIN
2010-10-29
Szil
a
rd P
a
ll
enabled GMX_PRE
F
ER_STATIC_LIBS CM
a
ke opt
i
o
n for CYGWIN
commit
|
commitdiff
|
tree
2010-10-29
Szilard
Pall
fixe
d
the def
a
ult f
o
r OpenMM plugin dir location (bug
.
.
.
commit
|
commitdiff
|
tree
2010-10-29
Szil
a
rd Pall
fixed make inst
a
ll-mdru
n
i
s
sue (bug #605)
commit
|
commitdiff
|
tree
2010-10-29
Szilar
d
Pal
l
(re)added
"
-d
e
v" suffix fo
r
the
CM
a
ke
har
d
coded
v
ersion
.
.
.
commit
|
commitdiff
|
tree
2010-10-29
Sz
i
la
r
d Pall
added C
M
ake
option GMX_PREFER_
S
TATIC_LIBS (also fix
e
s
.
.
.
commit
|
commitdiff
|
tree
2010-10-06
Szilar
d
Pall
f
i
x
ed syntax er
r
or from
commit bd5b
2
72
4
commit
|
commitdiff
|
tree
2010-10-05
Szilard Pall
improved o
p
tion compati
b
ili
t
y checking with OpenMM
commit
|
commitdiff
|
tree
2010-10-01
Szilard P
a
ll
make install-
m
drun now ins
t
a
l
les
shared libs (fix
for
.
.
.
commit
|
commitdiff
|
tree
2010-09-20
Szilard Pall
FindFFT
?
[F]
script
s
c
an us
e
a path provided in FFTWx
.
.
.
commit
|
commitdiff
|
tree
2010-09-08
Szil
a
rd Pall
Fixe
d
bin
a
ry/li
b
suffixing
in
c
onsistencies (bug
539)
commit
|
commitdiff
|
tree
2010-09-07
Sz
i
lard Pall
fixed war
n
ings caused by som
e
uninitialized v
a
riables
commit
|
commitdiff
|
tree
2010-09-06
Sz
i
lard Pall
Mark advanced va
r
iables/o
p
tions
t
hat are n
o
t
relevant
.
.
.
commit
|
commitdiff
|
tree
2010-09-06
Szilard Pall
Mark advanced GMX_BINARY_SUFFIX and
G
MX_LIBS_SUFFIX
.
.
.
commit
|
commitdiff
|
tree
2010-09-01
S
z
ila
r
d
Pall
Update
d
list
o
f supported GPU
s
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pall
Merge branch 'release
-
4-5-pa
t
ches' of git://git
.
gromacs
.
.
.
commit
|
commitdiff
|
tree
2010-08-31
Sz
i
lard
P
all
Improved option disa
b
l
i
ng on switc
h
ing
t
o OpenMM build
.
.
.
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pall
f
i
xed/imp
r
oved
c
make FFTW3 detectio
n
commit
|
commitdiff
|
tree
2010-08-03
Szilard Pall
minor a
d
dition
to previus gcc 4
.
1
.
x di
s
abl
i
ng
c
o
m
mit
commit
|
commitdiff
|
tree
2010-08-03
Szil
a
rd
Pall
Removed gcc 4
.
1
.
x
check as bug 431 tu
r
ned out
to
be
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
additional fix to commit c
5
d62af07d01b8, n
o
w
l
i
bmd
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
Me
r
g
e
branch 'ma
s
ter' of git@git
.
g
r
oma
c
s
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-24
Szilard
Pal
l
cmake sup
p
ort for
user-
d
efin
e
d bi
n
ar
y
prefixes, custom
.
.
.
commit
|
commitdiff
|
tree
2010-06-20
Szilard Pall
Mer
g
e branch 'master'
o
f git@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-20
S
zi
l
a
rd Pall
Fixed GCC version chec
k
ing i
n
cma
k
e
commit
|
commitdiff
|
tree
2010-06-17
Szilard
P
all
M
e
rge branch 'm
a
st
e
r' of git@git
.
gromacs
.
org:grom
a
cs
commit
|
commitdiff
|
tree
2010-06-17
Sz
i
lard Pall
fixed
minor bug in openmm_wrappe
r
.
cpp
commit
|
commitdiff
|
tree
2010-06-17
Szilard
P
all
I
m
pleme
n
ted (b
u
ggy) gc
c
4
.
1
.
x check
in cmake
.
commit
|
commitdiff
|
tree
2010-06-10
S
z
ilard Pal
l
fixed war
n
ing
s
in gmx_gpu_u
t
il
s
an
d
openmm_wra
p
p
er
commit
|
commitdiff
|
tree
2010-06-10
Szi
l
ard Pal
l
M
erge branch 'master
'
o
f
git@git
.
groma
c
s
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-10
S
z
ilard Pall
fixed logging
o
utput in do_md_open
m
m
commit
|
commitdiff
|
tree
2010-06-03
Szilard Pall
Merge br
a
nch 'maste
r
' of git@gi
t
.
gromac
s
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-01
Szilard Pa
l
l
Mer
g
e
b
r
anch '
m
aster' of git@git
.
g
rom
a
c
s
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-01
Szi
l
ard Pall
fixed O
p
enM
M
i
nt
e
raction type chec
k
commit
|
commitdiff
|
tree
2010-05-31
Szi
l
ard Pall
min
o
r f
i
xes
i
n ditribut
i
on fi
l
es
commit
|
commitdiff
|
tree
2010-05-31
Szilard
P
all
Merg
e
bra
n
ch 'master' of git@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-05-31
S
z
ila
r
d Pall
Updated README
an
d
INS
T
ALL files,
added
R
EADME-GPU
.
.
.
commit
|
commitdiff
|
tree
2010-05-31
Sz
i
l
ard Pall
Fixed t
y
po
i
n
C
M
a
keLists for md
r
u
n
-g
p
u
commit
|
commitdiff
|
tree
2010-05-30
Szilard
Pal
l
O
penMM: added co
m
binati
o
n rule ch
e
ck,
disabled restraint
.
.
.
commit
|
commitdiff
|
tree
2010-05-30
Szilard Pall
Fix for MSVC linking and
r
elease-bui
l
d OpenMM plugin
.
.
.
commit
|
commitdiff
|
tree
2010-05-26
Szilard
P
all
Fi
x
ed
s
ome co
m
pi
l
e
r warinigs
,
mino
r
b
ugs
a
nd documentation
.
.
.
commit
|
commitdiff
|
tree
2010-05-19
S
zilard Pall
M
erg
e
br
a
nch 'master' of git@git
.
gromacs
.
org
:
gromacs
commit
|
commitdiff
|
tree
2010-05-19
Szilard
Pall
fixed th
e
PME
t
o
l
e
r
a
nce "
a
djustment" for OpenMM
commit
|
commitdiff
|
tree
2010-05-12
Szi
l
ard Pall
Me
r
ge branc
h
'master' of g
i
t@gi
t
.
gromac
s
.
org
:
gromac
s
commit
|
commitdiff
|
tree
2010-05-12
Szilard Pall
Fi
x
in openmm_
w
rapper which
m
akes it work with MSV
C
.
commit
|
commitdiff
|
tree
2010-05-12
Szi
l
ard Pall
fixed signa
l
ha
n
dl
i
ng
i
n
m
d_openmm
commit
|
commitdiff
|
tree
2010-05-12
Szilard Pa
l
l
Merge branch
'mast
e
r' of git@gi
t
.
gromacs
.
o
rg:gromacs
commit
|
commitdiff
|
tree
2010-05-12
Szilard Pal
l
minor fi
x
es in docum
e
ntatio
n
+ some debugging
c
od
e
.
.
.
commit
|
commitdiff
|
tree
2010-05-12
S
z
ila
r
d Pall
a
d
ded
os-specifi
c
defines fro
m
cmak
e
re
q
u
ire
d
by memtestG8
0
commit
|
commitdiff
|
tree
2010-05-10
Szila
r
d Pall
M
S
VC fix for gmx_par
a
llel_
3
dfft
.
c
commit
|
commitdiff
|
tree
2010-05-10
Szilard Pall
only
issue open
m
m constrints war
n
ing
if
constrainsta
.
.
.
commit
|
commitdiff
|
tree
2010-05-07
Szilard
P
a
l
l
M
erge br
a
nch
'
m
as
t
er
'
of gi
t
@git
.
gromac
s
.
org
:
gromacs
commit
|
commitdiff
|
tree
2010-05-07
Szil
a
rd Pall
tem
p
orary fix for c
o
mpilation erro
r
w
i
t
h
GMX_OPENMM=ON
commit
|
commitdiff
|
tree
2010-05-07
Szilard Pall
Merge
b
ranch 'mast
e
r' of git@git
.
gromacs
.
org:
g
roma
c
s
commit
|
commitdiff
|
tree
2010-05-07
Szilard P
a
ll
Mer
g
e
branch 'master' of git@git
.
grom
a
cs
.
org:gr
o
macs
commit
|
commitdiff
|
tree
2010-05-07
Szilard Pall
added gromacs
file headers to
t
he OpenMM
-
related
files
commit
|
commitdiff
|
tree
2010-05-07
Szilard Pall
minor fixes,
document
a
ti
o
n and slight
API
change in
.
.
.
commit
|
commitdiff
|
tree
2010-05-07
Szilard
Pall
mino
r
up
d
ate
s
t
o Fin
d
Git and FindOpenMM
commit
|
commitdiff
|
tree
2010-05-07
Szila
r
d Pa
l
l
up
d
ated Find
C
UD
A
to
v
e
r
sion fro
m
cmake
2
.
8
.
1 for CUDA
.
.
.
commit
|
commitdiff
|
tree
2010-04-20
Szilard P
a
ll
M
erge branch 'm
a
ster' of git@git
.
grom
a
cs
.
org:
g
romacs
commit
|
commitdiff
|
tree
2010-04-20
Szilard Pall
doxygen
c
o
mme
n
ts for t
h
e OpenMM
p
art
commit
|
commitdiff
|
tree
2010-04-16
Szilard Pa
l
l
adde
d
d
o
c
umen
t
atio
n
for
the o
p
en
m
m_wrapper
commit
|
commitdiff
|
tree
2010-04-16
Szilard Pall
formatting f
i
x
of ope
n
mm wrappe
r
- gromacsif
i
ed the
.
.
.
commit
|
commitdiff
|
tree
2010-04-13
Szilard P
a
ll
cleane
d
up a bu
n
ch op m
e
s
s
i
n
do_md_o
p
enmm
commit
|
commitdiff
|
tree
2010-04-13
Szilard
Pall
bug
f
ix fo
r
d
o_md_openmm - w
a
s always pul
l
in
g
d
a
ta
f
rom
.
.
.
commit
|
commitdiff
|
tree
2010-04-13
Sz
i
lard Pall
fixed
t
i
m
ing
bug in do_md_op
e
nmm
commit
|
commitdiff
|
tree
2010-04-13
Szilard P
a
ll
added some more su
p
ported
GPUs (high-end
m
obile
a
n
d
.
.
.
commit
|
commitdiff
|
tree
2010-04-06
Szilard
P
all
Merg
e
b
r
an
c
h 'master' of git@git
.
gr
o
macs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-04-06
Szi
l
a
rd Pal
l
now g_bar
l
o
oks for lambda onl
y
in the las
t
dire
c
t
o
ry
.
.
.
commit
|
commitdiff
|
tree
2010-04-04
Szilard
P
al
l
Fixed g_bar bug
in l
a
m
b
da value p
a
rsing f
r
om pa
t
h
.
commit
|
commitdiff
|
tree
2010-03-29
Szilard Pall
fixed gmxGenerateVersionIn
f
o
.
cmake to pro
d
uce 8 digit
.
.
.
commit
|
commitdiff
|
tree
2010-03-28
S
zilard Pall
Th
e
cmake
d
evelop
m
ent
information g
e
nerating works
.
.
.
commit
|
commitdiff
|
tree
2010-03-28
Szilard Pall
adde
d
F
indG
i
t
.
cmake
script
commit
|
commitdiff
|
tree
2010-03-28
Szilard Pall
f
ix for
gmxGenerateVersionInfo
.
c
make, now works with
.
.
.
commit
|
commitdiff
|
tree
2010-03-25
Sz
i
lard Pall
fixed USE
_
VER
S
ION_H Cmake
o
ption
commit
|
commitdiff
|
tree
2010-03-18
Sz
i
l
a
rd
Pall
Merg
e
branch '
m
ast
e
r'
of gi
t
@git
.
g
r
om
a
cs
.
org:gro
m
ac
s
commit
|
commitdiff
|
tree
2010-03-18
Szilard P
a
ll
fi
x
ed
t
he
pro
b
lem of version
.
c not being bui
l
t
at
the
.
.
.
commit
|
commitdiff
|
tree
2010-03-18
Szi
l
ard Pall
added m
i
ssing VERSIO
N
prefix
t
o _gmx_ver_strin
g
commit
|
commitdiff
|
tree
2010-03-16
Sz
i
la
r
d Pall
fix f
o
r gen
v
e
rsion
.
sh
to
recogn
i
ze
the git://
.
.
.
/gromacs
.
.
.
commit
|
commitdiff
|
tree
2010-03-16
Szilard Pall
Merge b
r
anch 'master' of git@g
i
t
.
gromacs
.
org:
g
romacs
commit
|
commitdiff
|
tree
2010-03-16
Szilard Pall
C
m
ake imp
l
ementation t
o
g
e
nerate
development bui
l
d
.
.
.
commit
|
commitdiff
|
tree
2010-01-28
S
zila
r
d P
a
ll
Fixed d
e
adl
o
ck occuring
in gmx_
f
atal
.
c:
i
n
t
roduced
.
.
.
commit
|
commitdiff
|
tree