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added CMake option GMX_PREFER_STATIC_LIBS (also fixes bug #541)
2010-10-29
Szilard Pall
added CMake opt
i
o
n
GMX_PREFER_ST
A
TIC_LIBS (a
l
so fi
x
e
s
.
.
.
commit
|
commitdiff
|
tree
2010-10-06
Szi
l
ard Pall
f
i
xed syntax
e
rror
from commit bd5b2724
commit
|
commitdiff
|
tree
2010-10-05
S
zilard
Pall
improved option compat
i
b
ility c
h
eckin
g
with OpenMM
commit
|
commitdiff
|
tree
2010-10-01
Szil
a
rd Pall
make
i
nstall-mdrun now
i
n
s
talles sh
a
red l
i
bs (f
i
x
f
or
.
.
.
commit
|
commitdiff
|
tree
2010-09-20
Szilard Pall
FindFFT?[F]
sc
r
ipts can use
a
path
p
r
ovided in
F
FTWx
.
.
.
commit
|
commitdiff
|
tree
2010-09-08
Szilard
P
a
l
l
Fixed binary/lib suffixing i
n
co
n
sistencies
(
bug 539)
commit
|
commitdiff
|
tree
2010-09-07
Szilard Pall
f
i
xed warnings caused by so
m
e
un
i
ni
t
i
a
lized var
i
ables
commit
|
commitdiff
|
tree
2010-09-06
Szilard Pall
M
a
rk advanced va
r
iables/
o
ptions that are not releva
n
t
.
.
.
commit
|
commitdiff
|
tree
2010-09-06
Szilard
P
a
ll
Mark advanc
e
d GMX_BI
N
A
R
Y
_SUFFIX a
n
d GMX_LIBS_SUFFIX
.
.
.
commit
|
commitdiff
|
tree
2010-09-01
Szilard
P
a
ll
Updated
list of suppor
t
e
d
GPUs
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pall
Mer
g
e br
a
nch 're
l
ease-4
-
5-patch
e
s'
o
f git://git
.
gromacs
.
.
.
commit
|
commitdiff
|
tree
2010-08-31
Szila
r
d Pa
l
l
Improved
o
ption dis
a
bling
o
n swi
t
ching to
OpenMM bu
i
ld
.
.
.
commit
|
commitdiff
|
tree
2010-08-31
Szilard Pal
l
f
i
x
ed/
i
m
p
roved cmake FFT
W
3
de
t
ect
i
on
commit
|
commitdiff
|
tree
2010-08-03
Szilard P
a
ll
m
i
nor addition to pr
e
vius gcc
4
.
1
.
x
disa
b
ling commit
commit
|
commitdiff
|
tree
2010-08-03
Sz
i
lar
d
Pall
Re
m
oved
g
cc
4
.
1
.
x check
a
s
b
ug 4
3
1 t
u
rn
e
d out to b
e
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
additional fix t
o
commi
t
c
5
d
62
a
f07d01b8, now
l
i
b
md
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Szilard Pall
Me
r
ge bran
c
h
'master' of git@git
.
g
r
o
macs
.
org:gr
o
macs
commit
|
commitdiff
|
tree
2010-06-24
S
z
ilard
Pall
cma
k
e support for user-defined
binary prefixes, custom
.
.
.
commit
|
commitdiff
|
tree
2010-06-20
Szilar
d
Pall
Merge
b
ranch 'master' of git@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-20
Szilard P
a
ll
F
ixed GCC version checking in cmake
commit
|
commitdiff
|
tree
2010-06-17
Szil
a
rd P
a
ll
M
e
r
ge branch 'master' of git@git
.
g
romacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-17
S
zilard Pall
fix
e
d minor bug in
o
penmm_wr
a
pper
.
cpp
commit
|
commitdiff
|
tree
2010-06-17
Szila
r
d P
a
ll
Implemented (buggy) gcc 4
.
1
.
x che
c
k in cmake
.
commit
|
commitdiff
|
tree
2010-06-10
S
z
i
lard Pal
l
f
ixed warnings in
gm
x
_g
p
u_utils and openmm_wrapper
commit
|
commitdiff
|
tree
2010-06-10
S
z
ilar
d
Pal
l
Merge branch 'master' of git@git
.
gr
o
macs
.
org:gr
o
macs
commit
|
commitdiff
|
tree
2010-06-10
Szilard P
a
ll
f
i
xed
l
ogging outpu
t
in
d
o
_md_
o
penmm
commit
|
commitdiff
|
tree
2010-06-03
Szilard
P
a
ll
M
e
rge branch 'mast
e
r'
o
f
git
@
git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-01
Szil
a
rd Pa
l
l
Merge branch 'master' o
f
git@git
.
gr
o
macs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-06-01
Szilard
P
all
fixed OpenMM
i
nteract
i
on type check
commit
|
commitdiff
|
tree
2010-05-31
S
z
ilard Pall
minor fixes in
ditribution f
i
les
commit
|
commitdiff
|
tree
2010-05-31
Sz
i
lard Pall
Mer
g
e
branch 'mas
t
er'
o
f gi
t
@git
.
gr
o
m
acs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-05-31
Szilard Pa
l
l
Updated
R
EADME a
n
d
I
N
S
T
A
LL
files,
a
dded
README-GPU
.
.
.
commit
|
commitdiff
|
tree
2010-05-31
S
z
ilar
d
Pall
Fixed typo in CMakeLists for md
r
un-gpu
commit
|
commitdiff
|
tree
2010-05-30
Szilard Pall
O
penMM: added combination
r
ule chec
k
, di
s
abled restr
a
int
.
.
.
commit
|
commitdiff
|
tree
2010-05-30
S
zilard
Pall
Fi
x
f
o
r MSVC linking and release-build OpenMM plu
g
in
.
.
.
commit
|
commitdiff
|
tree
2010-05-26
Szilard Pall
Fi
x
ed s
o
me comp
i
ler wari
n
ig
s
, minor bugs an
d
documentation
.
.
.
commit
|
commitdiff
|
tree
2010-05-19
Szilard P
a
ll
Mer
g
e br
a
nch 'master' of git@git
.
gromac
s
.
org:
g
r
omacs
commit
|
commitdiff
|
tree
2010-05-19
S
z
il
a
rd Pall
fi
x
ed the P
M
E
tole
r
anc
e
"
adj
u
stment" for OpenMM
commit
|
commitdiff
|
tree
2010-05-12
S
zilard
Pall
Mer
g
e branch
'
m
aster' of
g
it@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-05-12
Szilard
Pall
Fix in ope
n
m
m
_
w
rapper whi
c
h makes it work w
i
t
h
MSVC
.
commit
|
commitdiff
|
tree
2010-05-12
Szilard Pa
l
l
fixed si
g
nal handling in md_openmm
commit
|
commitdiff
|
tree
2010-05-12
Szilar
d
Pall
M
erge branch 'master' of git
@
git
.
gromacs
.
org
:
gromacs
commit
|
commitdiff
|
tree
2010-05-12
Szilard Pall
minor fixes in documentation + some debugg
i
ng co
d
e
.
.
.
commit
|
commitdiff
|
tree
2010-05-12
Sz
i
lar
d
P
al
l
add
e
d os-specific defin
e
s from cmake req
u
ired by mem
t
estG80
commit
|
commitdiff
|
tree
2010-05-10
Szilard Pall
MSVC
fi
x
for gmx_parallel_3dfft
.
c
commit
|
commitdiff
|
tree
2010-05-10
Szil
a
rd Pall
o
n
l
y issu
e
openmm constrints
w
ar
n
ing if constrainsta
.
.
.
commit
|
commitdiff
|
tree
2010-05-07
Szilard Pall
Merge branch 'master
'
of git@git
.
gromacs
.
o
r
g:gromacs
commit
|
commitdiff
|
tree
2010-05-07
S
z
ilard
Pa
l
l
te
m
porary fix for co
m
pilation error w
i
th GMX_OPENMM
=
ON
commit
|
commitdiff
|
tree
2010-05-07
Szilard Pall
Merge bran
c
h
'master'
o
f g
i
t@git
.
gromacs
.
org:
g
ro
m
acs
commit
|
commitdiff
|
tree
2010-05-07
Szila
r
d P
a
ll
Merge branch 'master' of gi
t
@
git
.
gromac
s
.
org:gromacs
commit
|
commitdiff
|
tree
2010-05-07
Szila
r
d Pall
added gromacs file
heade
r
s
to t
h
e
O
penMM-related files
commit
|
commitdiff
|
tree
2010-05-07
Szi
l
ard Pall
mi
n
or fixes, documentation
a
nd
sl
i
g
ht API
c
h
ange
i
n
.
.
.
commit
|
commitdiff
|
tree
2010-05-07
Szi
l
ard Pall
minor updates to FindGit and Find
O
penMM
commit
|
commitdiff
|
tree
2010-05-07
Szilard
P
all
u
pd
a
ted F
i
ndCUDA to vers
i
o
n from
cmake 2
.
8
.
1 for CUDA
.
.
.
commit
|
commitdiff
|
tree
2010-04-20
S
z
ilard Pall
Merge
branch 'master' of gi
t
@g
i
t
.
gro
m
acs
.
org
:
gromacs
commit
|
commitdiff
|
tree
2010-04-20
Szi
l
ard
Pall
doxygen comments fo
r
th
e
Ope
n
MM par
t
commit
|
commitdiff
|
tree
2010-04-16
Szi
l
ar
d
P
a
l
l
ad
d
ed
documentation for the openmm_wr
a
p
per
commit
|
commitdiff
|
tree
2010-04-16
Szilard Pall
formattin
g
fix
o
f
o
penmm wrapper - gromacsi
f
ied the
.
.
.
commit
|
commitdiff
|
tree
2010-04-13
S
zilard P
a
ll
cleaned up
a
bunch op mes
s
in do_md_ope
n
mm
commit
|
commitdiff
|
tree
2010-04-13
Szilard Pa
l
l
b
ug
f
ix for do_md_ope
n
mm - was
always
p
ulling data from
.
.
.
commit
|
commitdiff
|
tree
2010-04-13
Szila
r
d Pall
f
ixed timing bug in do_md_ope
n
mm
commit
|
commitdiff
|
tree
2010-04-13
Szilard Pall
adde
d
some more
s
u
pported
GPUs
(high-
e
nd mobile
a
nd
.
.
.
commit
|
commitdiff
|
tree
2010-04-06
Szi
l
ard Pall
Me
r
g
e
branch
'
mast
e
r' of git@git
.
gromacs
.
org:groma
c
s
commit
|
commitdiff
|
tree
2010-04-06
Szilard P
a
ll
now g_bar looks for lam
b
da only in the la
s
t directo
r
y
.
.
.
commit
|
commitdiff
|
tree
2010-04-04
Szilard Pall
F
i
xed
g
_bar bug
in lambda
v
alue parsing from pat
h
.
commit
|
commitdiff
|
tree
2010-03-29
Szilard Pa
l
l
fixed gmx
G
en
e
rateVersionInfo
.
cmake to produce 8 digit
.
.
.
commit
|
commitdiff
|
tree
2010-03-28
S
z
ilard Pa
l
l
The cm
a
k
e
development inf
o
rm
a
tion generating wo
r
ks
.
.
.
commit
|
commitdiff
|
tree
2010-03-28
Szi
l
a
r
d
P
all
ad
d
ed FindGit
.
c
m
ake s
c
ript
commit
|
commitdiff
|
tree
2010-03-28
Szil
a
r
d Pall
fix for gmxGenerat
e
VersionI
n
f
o
.
cmake, now works with
.
.
.
commit
|
commitdiff
|
tree
2010-03-25
Szilard Pa
l
l
fixed USE_VE
R
S
ION
_
H Cm
a
k
e
op
t
ion
commit
|
commitdiff
|
tree
2010-03-18
Szilard Pall
Merge b
r
anch 'maste
r
' of git@
g
it
.
g
r
o
m
acs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-03-18
Sz
i
lard
P
al
l
fixed
t
h
e p
r
oblem of version
.
c not being built
a
t the
.
.
.
commit
|
commitdiff
|
tree
2010-03-18
Szi
l
ard Pall
add
e
d m
i
ssing VERSION
prefix to _gmx
_
ver_str
i
ng
commit
|
commitdiff
|
tree
2010-03-16
Szilard Pall
fix for
g
e
n
version
.
sh to re
c
ognize the gi
t
://
.
.
.
/gromacs
.
.
.
commit
|
commitdiff
|
tree
2010-03-16
Szil
a
rd Pall
M
e
r
g
e branch 'master' of git@git
.
gromacs
.
org:groma
c
s
commit
|
commitdiff
|
tree
2010-03-16
Szil
a
rd Pall
Cma
k
e implementatio
n
to
g
enerate de
v
elopm
e
nt build
.
.
.
commit
|
commitdiff
|
tree
2010-01-28
Szilar
d
Pall
Fixed deadlock
occuring in gmx
_
fatal
.
c:
i
ntrod
u
ced
.
.
.
commit
|
commitdiff
|
tree