From e9a8d62262287c9c607cb4fbb9ed5bf1d9fab83b Mon Sep 17 00:00:00 2001
From: "Justin A. Lemkul" <jalemkul@vt.edu>
Date: Mon, 11 Apr 2011 15:50:20 -0400
Subject: [PATCH] Revision to previous commit: fixed typo and now bugs actually
 show up.

---
 src/kernel/g_protonate.c | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/src/kernel/g_protonate.c b/src/kernel/g_protonate.c
index 43400a00d5..2b2ef81207 100644
--- a/src/kernel/g_protonate.c
+++ b/src/kernel/g_protonate.c
@@ -67,10 +67,6 @@ int main (int argc,char *argv[])
     "should correspond to the [BB]protonated[bb] state."
   };
  
-  const char *bugs[] = {
-    "For the moment, only .pdb files are accepted to the -s flag"
-  }
- 
   char        title[STRLEN+1];  
   const char  *infile;
   char        *grpnm;
@@ -89,6 +85,10 @@ int main (int argc,char *argv[])
   gmx_bool        bReadMultiple;
   output_env_t oenv;
   
+  const char *bugs[] = {
+    "For the moment, only .pdb files are accepted to the -s flag"
+  };
+ 
   t_filenm fnm[] = {
     { efTPS, NULL, NULL,         ffREAD  },
     { efTRX, "-f", NULL,         ffOPTRD },
@@ -99,7 +99,7 @@ int main (int argc,char *argv[])
   
   CopyRight(stderr,argv[0]);
   parse_common_args(&argc,argv,PCA_CAN_TIME,
-		    NFILE,fnm,0,NULL,asize(desc),desc,0,NULL,&oenv);
+		    NFILE,fnm,0,NULL,asize(desc),desc,asize(bugs),bugs,&oenv);
   
   infile=opt2fn("-s",NFILE,fnm);
   read_tps_conf(infile,title,&top,&ePBC,&x,NULL,box,FALSE);
-- 
2.11.4.GIT