repo.or.cz
/
gromacs.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Make use of recent changes to prepareKernelArguments(...)
2019-08-25
Arte
m
Zhmur
o
v
Make use of recent changes
to prepareKern
e
lA
r
guments
.
.
.
commit
|
commitdiff
|
tree
2019-08-25
A
rtem Zhm
u
rov
Misceleneous improvement
s
to the
L
eap
F
r
og tests
commit
|
commitdiff
|
tree
2019-08-14
Artem Zhmuro
v
BugFix:
Zeroing the padded a
r
ea o
f
c
oordinates vectors
.
.
.
commit
|
commitdiff
|
tree
2019-08-13
A
r
t
em Zhmurov
Make use o
f
reference data in integrator tests
commit
|
commitdiff
|
tree
2019-08-13
Artem Zhmurov
Make use of refe
r
ence
d
a
ta in SETTLE tests
commit
|
commitdiff
|
tree
2019-08-09
Ar
t
em Zhmurov
Prepare
Update and Constrai
n
ts for Domain D
e
composition
commit
|
commitdiff
|
tree
2019-08-09
Artem Zhmuro
v
R
efa
c
toring of the SETTLE
t
es
t
s
commit
|
commitdiff
|
tree
2019-08-08
Artem Zhmurov
Refac
t
or Leap-
F
r
o
g test
s
and connec
t
them to
C
P
U
version
commit
|
commitdiff
|
tree
2019-08-06
Artem
Z
hmu
r
ov
Fix f
o
r cmake lists
in m
d
l
ib tests
commit
|
commitdiff
|
tree
2019-08-06
Arte
m
Zhmurov
Remove PImp
l
scaffo
l
ding from CU
D
A version of Lea
p
.
.
.
commit
|
commitdiff
|
tree
2019-07-31
Artem Zhmurov
C
ha
n
ge the file
s
t
r
ucture in constr
a
ints te
s
ts
commit
|
commitdiff
|
tree
2019-07-31
Artem Zhmurov
Introduce fu
n
ction that checks if
t
he c
o
mputations
.
.
.
commit
|
commitdiff
|
tree
2019-07-26
Ar
t
em Zhmurov
R
e
move PImp
l
sca
f
f
o
lding f
r
om CU
D
A version of SETTLE
commit
|
commitdiff
|
tree
2019-07-05
Arte
m
Zhmuro
v
Remove PImpl sc
a
f
f
olding
f
rom C
U
DA version of LINCS
commit
|
commitdiff
|
tree
2019-07-04
Arte
m
Zhmur
o
v
Use re
a
llo
c
a
t
eDeviceBu
f
fer(
.
.
.
) in CUDA version
of
.
.
.
commit
|
commitdiff
|
tree
2019-07-03
Ar
t
em Zhmurov
Ea
r
ly
exit for CUDA versi
o
n
s
of SETTLE and LI
N
CS
commit
|
commitdiff
|
tree
2019-07-03
Artem Zhm
u
rov
Memory management fi
x
es in CUDA version
of LINCS
commit
|
commitdiff
|
tree
2019-07-03
Artem Z
h
murov
Combine CUDA Lea
p
-Fro
g
, LINCS an
d
SETTLE
.
II
.
commit
|
commitdiff
|
tree
2019-06-18
Artem
Z
hmurov
Combine CUD
A
L
e
ap-Frog, LI
N
C
S
an
d
SETT
L
E
.
I
.
commit
|
commitdiff
|
tree
2019-06-18
Arte
m
Zhmurov
Bug
fix: C
o
nstraints tests are not insta
n
tiated with
.
.
.
commit
|
commitdiff
|
tree
2019-05-24
Artem Zhmur
o
v
Cla
r
ify whi
c
h of the main en
e
rg
y
terms are pri
n
te
d
.
commit
|
commitdiff
|
tree
2019-05-24
Artem Zhmurov
Clarif
y
the
E
nergyOutput III
commit
|
commitdiff
|
tree
2019-05-24
Artem Zhm
u
rov
Clarify the EnergyOutpu
t
I
I
commit
|
commitdiff
|
tree
2019-05-13
Artem Zh
m
urov
C
larify
t
he Ener
g
y
O
utput
I
commit
|
commitdiff
|
tree
2019-05-12
Artem Zhmurov
CUDA ve
r
sio
n
of
Leap-
F
rog
integr
a
tor wi
t
h basic tests
commit
|
commitdiff
|
tree
2019-05-06
Artem Zhmurov
Fixing
m
i
n
o
r memory issue
s
in MDLib
commit
|
commitdiff
|
tree
2019-05-02
Artem
Zhmurov
Use test with parameters for EnergyOu
t
put
commit
|
commitdiff
|
tree
2019-04-30
Arte
m
Zhm
u
rov
C
U
DA version of S
E
TTLE algorithm with
b
asic tests
commit
|
commitdiff
|
tree
2019-04-29
A
rtem Zhmurov
F
ix for
th
e
CUDA version
o
f
L
I
N
C
S
commit
|
commitdiff
|
tree
2019-04-28
Ar
t
em Zhmurov
CUDA vers
i
on o
f
LINCS cons
t
rai
n
ts
.
commit
|
commitdiff
|
tree
2019-04-25
Artem Zhmu
r
ov
Imp
r
ovem
e
nts for energy output t
e
st
.
commit
|
commitdiff
|
tree
2019-04-16
Artem Zhmurov
Fix for the m
e
mo
r
y
a
c
c
e
s
s e
r
ror in constr
a
in
t
s tes
t
.
commit
|
commitdiff
|
tree
2019-04-04
Artem Zhmurov
Remove is
P
res
s
ureCouplingStep(
.
.
.
)
commit
|
commitdiff
|
tree
2019-04-04
Artem
Z
hmurov
R
e
move
isTempe
r
atureCouplingStep(
.
.
.
)
commit
|
commitdiff
|
tree
2019-03-28
A
rtem
Zhmurov
GPU naming con
v
en
t
ions
commit
|
commitdiff
|
tree
2019-03-25
A
r
tem Zhm
u
rov
Remove
u
nused
headers
commit
|
commitdiff
|
tree
2019-03-13
A
rtem
Zhmurov
Basi
c
routines
to hand
l
e periodic
b
o
u
ndary
.
commit
|
commitdiff
|
tree
2019-02-21
Artem Z
h
murov
Test fo
r
LI
N
CS and SHAKE c
o
nstraints
.
commit
|
commitdiff
|
tree
2019-02-19
Artem Zhmurov
PBC
s
etup for GPU is mo
v
ed into pbcutils
.
commit
|
commitdiff
|
tree
2019-02-13
Artem Z
h
murov
Ignore Visu
a
l
S
tudio
C
ode metadata
.
commit
|
commitdiff
|
tree
2018-12-27
A
r
tem Zh
m
urov
The tests
f
o
r
L
I
NCS and SH
A
KE
c
onstra
i
nts
.
commit
|
commitdiff
|
tree