repo.or.cz
/
gromacs.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Fixed non-interactive stdin selection parsing.
2010-08-11
Teemu M
u
rtol
a
Fixed
non-inter
a
ctive s
t
din
selection p
a
r
sing
.
commit
|
commitdiff
|
tree
2010-08-10
T
e
e
m
u Murtol
a
Fixed
a se
g
fault in selection
c
ode
.
commit
|
commitdiff
|
tree
2010-08-09
Te
e
mu Murtola
Fixed comp
i
ler wa
r
ni
n
gs in qm_orca
.
c
.
commit
|
commitdiff
|
tree
2010-08-09
Teemu Murtola
M
o
re PME-User-Switch
f
ixe
s
.
commit
|
commitdiff
|
tree
2010-08-09
Te
e
m
u
Murt
o
la
Fixes for PME-
U
ser-S
w
itch
.
commit
|
commitdiff
|
tree
2010-08-06
Teemu Mur
t
ol
a
Added a
c
om
m
ent
about ICC warni
n
gs in p
a
rser
.
y
.
commit
|
commitdiff
|
tree
2010-06-29
Teemu M
u
r
t
ola
mdrun aga
i
n prints copyright no
t
ice to stderr
.
commit
|
commitdiff
|
tree
2010-06-29
T
eem
u
M
urtola
Ad
d
ed gmxcpp s
u
pport for
-
Dfo
o
=bar
in mdp
files
.
commit
|
commitdiff
|
tree
2010-06-28
T
eemu Murtola
Rem
o
ved unneces
s
ary
t
yp
e
casts
f
rom small
o
c
.
h
.
commit
|
commitdiff
|
tree
2010-06-28
Teemu Murtol
a
Fix
e
d some ea
s
y
-
to-fix C+
+
warnings
.
commit
|
commitdiff
|
tree
2010-06-28
Teemu Murtola
Fixed a t
y
po in selection compiler
.
commit
|
commitdiff
|
tree
2010-06-22
Tee
m
u Murtola
F
ixed gmxcpp directo
r
y
searc
h
f
o
r
inc
l
ude files
.
commit
|
commitdiff
|
tree
2010-06-13
Teemu Murtola
Fixed a compi
l
e
r
warning
.
commit
|
commitdiff
|
tree
2010-06-08
Teemu
M
u
r
t
ola
Cha
n
g
ed s
e
l
ec
t
ion
boolean operator precedence
.
commit
|
commitdiff
|
tree
2010-05-27
Te
e
mu Murtola
Fixed a few signed/u
n
signed comparison
warnings
.
commit
|
commitdiff
|
tree
2010-05-21
Teemu Murto
l
a
Selections comp
i
ler comme
n
ts and
d
ebugging aids
.
commit
|
commitdiff
|
tree
2010-05-21
Te
e
mu Murtola
Simplified s
e
l
ec
t
ion co
m
pila
t
ion, fixing a
b
ug
.
commit
|
commitdiff
|
tree
2010-05-20
Teemu Murtola
A
dded gemin
a
te
.
c
to src/tools
/
CMa
k
eList
s
.
txt
.
commit
|
commitdiff
|
tree
2010-05-20
Teemu M
u
rtol
a
R
e
d
u
ce
d
memor
y
usage for
static selectio
n
s
.
commit
|
commitdiff
|
tree
2010-05-20
Teemu M
u
r
t
o
la
Selection compi
l
er bu
g
f
i
x
.
commit
|
commitdiff
|
tree
2010-05-20
Tee
m
u Murtola
F
i
xed save_realloc() to
not le
a
k
memo
r
y
.
commit
|
commitdiff
|
tree
2010-05-20
Teemu Murtola
Reduc
e
d
m
e
mory use fo
r
arithmetic in selectio
n
s
.
commit
|
commitdiff
|
tree
2010-05-20
Teemu Mur
t
ola
R
emove
d
compile
r
warn
i
n
g
s
.
commit
|
commitdiff
|
tree
2010-05-19
Teemu M
u
rtola
Merge
bran
c
h 'master
'
of git@g
i
t
.
g
romacs
.
org:
g
ro
m
acs
commit
|
commitdiff
|
tree
2010-05-19
Teem
u
Mur
t
ol
a
R
emo
v
ed
o
b
sol
e
te selection code
.
commit
|
commitdiff
|
tree
2010-05-19
Teemu Murtola
Big rework of
select
i
on compilation/eval
u
at
i
on
.
commit
|
commitdiff
|
tree
2010-05-14
T
e
e
mu
M
urtola
Restru
c
tured selection su
b
expre
s
s
i
on compilation
.
commit
|
commitdiff
|
tree
2010-05-14
T
e
em
u
Mur
t
ol
a
Bas
i
c selection
memory
p
ooling
.
commit
|
commitdiff
|
tree
2010-05-14
Te
e
mu Murtola
Si
m
pler special cas
e
subexpressi
o
n handling
.
commit
|
commitdiff
|
tree
2010-05-14
Teemu Murtola
Selec
t
ion comp
i
ler bool
f
lags into a s
i
n
g
le
f
ield
.
commit
|
commitdiff
|
tree
2010-05-11
Teemu Murtola
U
p
date
d
sha
r
e/to
p
Makefile
.
am files
.
commit
|
commitdiff
|
tree
2010-05-11
Teemu
M
urtol
a
G
r
id-based utility n
b
search
i
mplementa
t
ion
.
commit
|
commitdiff
|
tree
2010-05-11
Te
e
mu Murtola
Improve
d
neig
h
bo
r
search
i
ng API for an
a
lysis
.
commit
|
commitdiff
|
tree
2010-05-07
T
e
em
u
Murt
o
la
Minor improvem
e
nts to sel
e
c
t
ion
help
.
commit
|
commitdiff
|
tree
2010-05-07
Teemu Murtola
Basic ari
t
h
met
i
c e
x
pression suppo
r
t
in selections
.
commit
|
commitdiff
|
tree
2010-05-06
Teemu M
u
rtola
More memory optimi
z
a
t
i
o
n
s
for
s
e
lec
t
ions
.
commit
|
commitdiff
|
tree
2010-05-06
Teem
u
Murtola
Reduce
d
peak memory usage for
se
l
ection
s
.
commit
|
commitdiff
|
tree
2010-05-05
Teemu Murt
o
la
Fix
e
d a bug in
g
mx_wcmatc
h
(
)
.
commit
|
commitdiff
|
tree
2010-04-29
Tee
m
u Murtola
F
ixed some memory le
a
ks
.
commit
|
commitdiff
|
tree
2010-04-29
T
e
e
mu
M
urtola
F
i
x
for trjco
n
v -e op
t
ion (bug #30
5
)
.
commit
|
commitdiff
|
tree
2010-04-28
Teemu
Murtola
Fixed g_wham error
m
e
s
sage (bugzilla #397)
.
commit
|
commitdiff
|
tree
2010-04-28
Teemu Murtola
Added a
few fun
c
t
i
ons f
o
r freeing m
e
mory
.
commit
|
commitdiff
|
tree
2010-04-28
Tee
m
u Murto
l
a
Se
l
ec
t
ion based on molecule numbers
.
commit
|
commitdiff
|
tree
2010-04-28
Teemu Murtola
Fixed a m
e
mory leak in selection
c
ode
.
commit
|
commitdiff
|
tree
2010-04-27
Teemu
Murtola
"same" selections with strin
g
keywords
.
commit
|
commitdiff
|
tree
2010-04-27
T
e
emu
M
urtola
Sup
p
ort fo
r
selection str
i
ng keyword
s
as
params
.
commit
|
commitdiff
|
tree
2010-04-27
Teemu Murto
l
a
Fixed a memory leak
in parse_common_args
.
commit
|
commitdiff
|
tree
2010-04-27
T
eemu Murtola
Re
m
oved
i
nc
o
r
rect mak
e
mdrun cmd
s
in Makefile
.
am
.
commit
|
commitdiff
|
tree
2010-04-26
Teemu Murtol
a
Merg
e
branch
'm
a
ster' of git@git
.
gr
o
macs
.
org:groma
c
s
commit
|
commitdiff
|
tree
2010-04-26
Teemu Murtola
Improved selec
t
i
on keyword "same
"
.
commit
|
commitdiff
|
tree
2010-04-26
T
ee
m
u
M
urtola
A
dded
some synonyms
f
or common selec
t
ion keywords
.
commit
|
commitdiff
|
tree
2010-04-26
Tee
m
u Mu
r
tola
F
i
xed minor memory leak on some
se
l
ect
i
o
n errors
.
commit
|
commitdiff
|
tree
2010-04-26
Te
e
mu Murtola
I
mpro
v
ement to commit 67311e3
.
commit
|
commitdiff
|
tree
2010-04-26
Teemu Murt
o
la
I
mproved selection subexpr
e
ssion compilation
.
commit
|
commitdiff
|
tree
2010-04-22
Tee
m
u M
u
r
t
ola
S
e
parate
m
ethod fo
r
f
r
e
eing selectio
n
m
ethod da
t
a
.
commit
|
commitdiff
|
tree
2010-04-22
Teemu Murtola
M
ade two sele
c
tion
pa
r
ser functi
o
ns non-sta
t
ic
.
commit
|
commitdiff
|
tree
2010-04-22
Teem
u
Murtola
Selec
t
ion compiler mem
o
ry allocation bug
fix
.
commit
|
commitdiff
|
tree
2010-04-22
Teemu M
u
rtola
S
u
pport init_fram
e
in s
t
atic selection metho
d
s
.
commit
|
commitdiff
|
tree
2010-04-20
Teemu Murtola
Added g_select
to prog
r
ams
.
txt
.
commit
|
commitdiff
|
tree
2010-04-20
Te
e
mu Murtola
M
ore r
o
bus
t
li
b
t
o
o
l
prefix
s
t
rip
p
ing
.
commit
|
commitdiff
|
tree
2010-04-12
Tee
m
u Murto
l
a
C++ fixes fo
r
s
n
ew
(
) a
n
d friends
.
commit
|
commitdiff
|
tree
2010-04-08
Teemu M
u
rt
o
la
A
utoc
o
nf checks for ve
r
sion info generation
.
commit
|
commitdiff
|
tree
2010-03-24
Teemu Murt
o
la
Fixed genversi
o
n
.
s
h
on Ma
c
s
.
commit
|
commitdiff
|
tree
2010-03-11
Teemu Murtola
M
inor
v
ersi
o
n str
i
ng update
.
commit
|
commitdiff
|
tree
2010-03-05
T
e
e
m
u
Murtol
a
Improved version string
s
.
commit
|
commitdiff
|
tree
2010-03-04
T
eemu Murtol
a
A
d
ded sel
e
c
t
ion exam
p
les
.
commit
|
commitdiff
|
tree
2010-03-01
Teemu
Murtola
Fixed a bug cau
s
ing incorrect
empt
y
sel
e
ctions
.
commit
|
commitdiff
|
tree
2010-02-26
T
e
emu Murtola
Improved version fo
r
b
u
ilds from modified tre
e
s
.
commit
|
commitdiff
|
tree
2010-02-22
T
e
e
mu Murtola
Backpo
r
ted git sha
1
ver
s
ion strin
g
(bugzilla #393)
.
commit
|
commitdiff
|
tree
2010-02-18
Te
e
mu Murtola
A more intuitive fix to copyrite
.
c depende
n
cy
.
commit
|
commitdiff
|
tree
2010-02-18
T
e
emu
M
urtola
Show
g
i
t sha1 hash
in ve
r
sio
n
s
tri
n
g (bug #393)
.
commit
|
commitdiff
|
tree
2009-12-19
Teemu
Murto
l
a
Fixe
d
i
nt
e
ractive select
i
on help
.
commit
|
commitdiff
|
tree
2009-12-17
Teemu M
u
rt
o
l
a
Velocities and f
o
rces for
selections
.
commit
|
commitdiff
|
tree
2009-12-16
Teemu Mu
r
t
ola
Use read_stdin_li
n
e() for selections f
r
o
m a pipe
.
commit
|
commitdiff
|
tree
2009-12-14
Teemu
Murtola
Better selection std
i
n
handling
.
commit
|
commitdiff
|
tree
2009-11-11
Tee
m
u Mur
t
o
la
F
i
x
e
d s
e
gfaults
w
ith empty select
i
ons
.
commit
|
commitdiff
|
tree
2009-11-11
T
e
emu
M
ur
t
ola
More general se
l
ec
t
io
n
p
a
rser grammar
.
commit
|
commitdiff
|
tree
2009-11-10
Teemu
Murt
o
la
gmxcpp fixes (bug #3
6
0 plus o
t
h
e
r fixes)
.
commit
|
commitdiff
|
tree
2009-11-10
Teemu Murt
o
l
a
g
mxcpp fi
x
es (bug
#360 plus o
t
he
r
fi
x
es)
.
commit
|
commitdiff
|
tree
2009-11-10
Teemu M
u
rtola
Added a gmxdump -p
o
ption t
o
p
reproce
s
s topolo
g
y
.
commit
|
commitdiff
|
tree
2009-11-09
Teemu M
u
rtol
a
Some si
m
ple memory leak fixes
.
commit
|
commitdiff
|
tree
2009-11-09
Teemu
M
ur
t
ola
A
dded a resind selection keyword
.
commit
|
commitdiff
|
tree
2009-11-06
Te
e
mu Murtol
a
Sele
c
t
ion
m
erge no
w
w
o
rks with
constan
t
p
o
s
itions
.
commit
|
commitdiff
|
tree
2009-11-06
Teemu Murt
o
la
A bit more modular
s
e
l
ection
pos
i
tion handl
i
ng
.
commit
|
commitdiff
|
tree
2009-11-06
Teemu Murtola
B
e
t
t
er
g_energy -nmol
behavior (b
u
g #365)
.
commit
|
commitdiff
|
tree
2009-11-06
Teemu
M
urtola
Better g_e
n
ergy -nm
o
l
behavior (b
u
g
#365)
.
commit
|
commitdiff
|
tree
2009-11-05
Teemu Murtola
More modular
po
s
i
tion
h
andli
n
g
.
commit
|
commitdiff
|
tree
2009-11-05
Teemu Murtola
More flexi
b
le se
l
ecti
o
n merging
.
commit
|
commitdiff
|
tree
2009-11-05
Teemu
Murtola
Selection
merge k
e
yword fixes
.
commit
|
commitdiff
|
tree
2009-11-05
T
e
e
m
u
M
urto
l
a
Added a missing return in gmx_fio_get_fil
e
_md5()
.
commit
|
commitdiff
|
tree
2009-11-04
Teemu Mu
r
tola
Ad
d
itional selection keywords (
p
lus and merge)
.
commit
|
commitdiff
|
tree
2009-11-02
T
e
emu Murtola
Impr
o
ved
Dox
y
g
en doc
s
for selection i
n
terna
l
s
.
commit
|
commitdiff
|
tree
2009-10-29
Teem
u
Murtola
Im
p
roved
i
n
teractive selection input
.
commit
|
commitdiff
|
tree
2009-10-28
Teemu Murtola
Updated
select
i
on
d
ocume
n
ta
t
ion
.
commit
|
commitdiff
|
tree
2009-10-27
Teemu Murt
o
la
S
e
lection parser cleanup
.
commit
|
commitdiff
|
tree
2009-10-26
Teemu Murto
l
a
Analysis lib
.
can
now
a
naly
z
e just a topology
.
commit
|
commitdiff
|
tree
2009-10-26
T
eemu Murtola
Fixed s
e
lections int
r
odu
c
e
d
i
n
commit
82ecf01
.
.
.
commit
|
commitdiff
|
tree
2009-10-26
Teemu
Murtola
Fixed a segfaul
t
i
n select
i
o
n
lib
.
commit
|
commitdiff
|
tree
2009-10-21
Te
e
m
u
Murtola
Fourier dihedrals (dih
.
type 5) shou
l
d now work
.
commit
|
commitdiff
|
tree
2009-10-21
Teemu Murtol
a
Fou
r
ier dihedr
a
ls (dih
.
type 5) should n
o
w work
.
commit
|
commitdiff
|
tree
next