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The relative error for calculation of Ewald and PME forces is passed to openmm via...
2010-05-14
Rossen Apos
t
olov
The relative error fo
r
calc
u
l
ation of Ew
a
ld an
d
PME
.
.
.
commit
|
commitdiff
|
tree
2010-05-12
Ross
e
n
Apo
s
tolov
Merge bra
n
ch
'
mas
t
er' of g
i
t
.
gromacs
.
o
r
g:groma
c
s
commit
|
commitdiff
|
tree
2010-05-12
R
ossen Apostolov
Fi
x
for Urey-Br
a
d
l
ey potential in
O
p
enMM
commit
|
commitdiff
|
tree
2010-05-11
Ros
s
e
n
Apo
s
tolov
Added suppor
t
for Urey-B
r
adley potentials to the ope
n
mm
.
.
.
commit
|
commitdiff
|
tree
2010-05-04
Rossen Apost
o
l
ov
Fi
x
ed
improper
error
m
e
ssage in openmm_wrap
p
er
.
commit
|
commitdiff
|
tree
2010-04-01
Ro
s
s
en Aposto
l
o
v
Minor fix
e
s of typos
.
commit
|
commitdiff
|
tree
2010-03-31
Rossen Apo
s
tolov
Fixed a gmx_wa
r
n
i
n
g
crash in openmm
_
w
r
apper
.
c
p
p
commit
|
commitdiff
|
tree
2010-03-31
Rossen Apostolov
Fixed src/co
n
trib/optio
n
s
.
c t
o
use
t
he new parse_common_args
.
.
.
commit
|
commitdiff
|
tree
2010-03-27
Rossen Aposto
l
ov
OpenMM: "md" op
t
ion
is no
w
accep
t
ed
.
commit
|
commitdiff
|
tree
2010-03-24
Ros
s
en Apostolov
Allowing a
l
so CUDA versions late
r
than
2
.
3
.
commit
|
commitdiff
|
tree
2010-03-24
R
o
ssen Apostolov
S
i
gn
a
l handling is now
enabled fo
r
the open
m
m
plat
f
o
r
m
.
commit
|
commitdiff
|
tree
2010-03-17
Rossen A
p
ostolov
openmm: some cleanup in md_open
m
m
.
c
a
nd
m
drun
.
c
commit
|
commitdiff
|
tree
2010-03-12
R
ossen Apostol
o
v
Enabl
e
d
che
c
kpoints in Op
e
nM
M
.
commit
|
commitdiff
|
tree
2010-03-12
Rossen Ap
o
stolov
Automati
c
a
l
ly disabl
e
threads for Open
M
M buil
d
s
.
commit
|
commitdiff
|
tree
2010-03-11
Rossen Apostolov
Various f
i
x
e
s
.
commit
|
commitdiff
|
tree
2010-03-11
Rossen Apostolov
Small f
i
xes in mdrun desc
.
; ena
b
le periodic molecules
commit
|
commitdiff
|
tree
2010-03-11
Ro
s
se
n
Ap
o
s
t
olov
Enalbed -maxh optio
n
f
or us
a
ge with
O
penMM bi
n
aries
commit
|
commitdiff
|
tree
2010-03-11
R
o
ssen
A
postolov
Clea
n
ed up do_m
d
_open
m
m
.
commit
|
commitdiff
|
tree
2010-03-11
R
o
s
sen
Apost
o
l
ov
Rew
o
rke
d
th
e
integrator and therm
o
stat opt
i
ons
.
commit
|
commitdiff
|
tree
2010-03-11
Rossen Apostolov
Fixed t
h
e wrong output t
i
me frames
commit
|
commitdiff
|
tree
2010-03-11
Ro
s
s
e
n Apos
t
o
l
ov
do_md_opennm
m
.
h (aka pa
t
c
hed) now w
o
rk
s
but the time
.
.
.
commit
|
commitdiff
|
tree
2010-03-11
R
osse
n
A
p
ostolov
Init
i
al
p
orting, do_md_openmm_no
p
atch
.
h is used
.
commit
|
commitdiff
|
tree
2009-10-02
Rossen
A
postol
o
v
User
s
are
now r
e
fered to the
ne
w
website i
n
case of
.
.
.
commit
|
commitdiff
|
tree
2009-08-17
Ro
s
s
e
n Apostolov
Fixed inco
r
rect scal
i
ng of forces
in reci
p
rocal spac
e
.
.
.
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