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Fixed segv in g_potential. Field output has now also the correct prefactor for V/nm
2010-10-22
C
a
rs
t
en Kutzner
F
i
xed
s
e
g
v in
g
_po
t
ential
.
F
iel
d
output
has
n
ow
a
ls
o
.
.
.
commit
|
commitdiff
|
tree
2010-09-21
C
arsten Kut
z
ner
A
dded missing
#ifd
e
f
around MPI directive
commit
|
commitdiff
|
tree
2010-09-20
Cars
t
en Kutzn
e
r
gm
x
_pme_e
r
ror now use
s
at
most all charge
s
fo
r
the
.
.
.
commit
|
commitdiff
|
tree
2010-09-17
Carsten
K
utzner
Fixed
reprodu
c
ibility of g_pme_error resul
t
s in para
l
lel
commit
|
commitdiff
|
tree
2010-09-14
Ca
r
sten
Kutzner
R
emoved unused code from g_pme_error
commit
|
commitdiff
|
tree
2010-09-01
Carste
n
Kutzner
F
i
xed
m
ake_edi when no
f
it
t
i
n
g was d
o
ne in g_covar
commit
|
commitdiff
|
tree
2010-07-22
C
a
rst
e
n Kutzn
e
r
Removed //
com
m
ent in qm_orca
.
c
commit
|
commitdiff
|
tree
2010-07-14
C
a
rsten Kutzn
e
r
Fixed several mi
n
or issues
i
n E
D
/floodi
n
g module
commit
|
commitdiff
|
tree
2010-07-12
Carste
n
Kut
z
ner
g_tune_pme
n
o
w reca
l
cu
l
ates scaling factors from a
c
tual
.
.
.
commit
|
commitdiff
|
tree
2010-06-29
Car
s
ten Kut
z
ner
a
dd -cpnum support
to g_tune_
p
me
commit
|
commitdiff
|
tree
2010-06-28
Ca
r
ste
n
K
utzner
moved error-check a
f
te
r
logfile parsing
commit
|
commitdiff
|
tree
2010-06-25
C
a
r
s
ten
Kut
z
ner
Parse stderr of tuning ru
n
s t
o
catch fa
t
al e
r
rors which
.
.
.
commit
|
commitdiff
|
tree
2010-06-25
C
a
r
sten
K
utzner
h
idden -passall option can be used to add
e
xtra strings
.
.
.
commit
|
commitdiff
|
tree
2010-06-24
Carsten
K
utz
n
er
speed up tuning for large number
s
of p
r
ocesses
commit
|
commitdiff
|
tree
2010-06-24
Car
s
ten Kutzner
try to avoid weir
d
PME/PP co
m
binations in
g
_
tune_p
m
e
commit
|
commitdiff
|
tree
2010-06-22
Carsten Kutzner
g
_tune_pme n
o
w
a
lso upd
a
tes rlistlong etc
.
commit
|
commitdiff
|
tree
2010-06-21
Carsten Kutzner
g_tune_pme: add option to choose how n
p
rocs
i
s
p
ass
e
d
.
.
.
commit
|
commitdiff
|
tree
2010-06-17
Ca
r
sten Kutzner
Merge branch 'master
'
o
f
git
.
gr
o
macs
.
org:gr
o
ma
c
s
commit
|
commitdiff
|
tree
2010-06-17
C
a
rsten Kutzner
f
i
xed tuning for loadleveler and updated it to modified
.
.
.
commit
|
commitdiff
|
tree
2010-06-16
Carste
n
Kutzner
fixed g_tune_pme for t
h
e
use with IBM's poe
commit
|
commitdiff
|
tree
2010-06-08
Carste
n
Kutzner
fixed c
o
ntinuation r
u
ns
w
it
h
essenti
a
l
d
yna
m
ics
commit
|
commitdiff
|
tree
2010-06-04
C
a
r
sten Kutzner
removed
todo it
e
m
commit
|
commitdiff
|
tree
2010-06-04
Ca
r
s
te
n
K
u
tzner
fixed
tun
i
ng with c
h
eckpo
i
nt
f
i
les
commit
|
commitdiff
|
tree
2010-06-04
Cars
t
en Ku
t
zner
fixed file appending f
o
r es
s
en
t
ial dynamics out
p
ut
.
.
.
commit
|
commitdiff
|
tree
2010-06-04
Carsten
K
utzner
fixed
-
def
f
nm option fo
r
g_tune
_
p
m
e
commit
|
commitdiff
|
tree
2010-04-23
Carsten Kutzner
M
e
rg
e
branch 'mas
t
er' of git
.
g
r
omacs
.
org:gromacs
commit
|
commitdiff
|
tree
2010-04-23
Carsten Kutzne
r
fixed
segv's in gmx_clust
e
r when u
s
ed w
i
th
xpm in
p
ut
.
.
.
commit
|
commitdiff
|
tree
2010-02-03
Ca
r
st
e
n
K
ut
z
ner
U
pdated edsam
.
h
commit
|
commitdiff
|
tree
2010-02-03
Cars
t
en
Kutz
n
er
R
e
moved usele
s
s c
o
d
e
i
n dd_
m
ake_local_group_indices
commit
|
commitdiff
|
tree
2010-01-26
Carsten Kutz
n
er
Fi
x
ed
segv
in make_edi when no ref
e
rence
structure
.
.
.
commit
|
commitdiff
|
tree
2010-01-26
Carst
e
n Kutzner
F
ixed segv
in make_edi when no reference stru
c
tur
e
.
.
.
commit
|
commitdiff
|
tree
2010-01-18
Carsten Kutzner
Resubmitted changes that
w
ere
accidentally
u
nd
o
ne by
.
.
.
commit
|
commitdiff
|
tree
2010-01-13
Carste
n
Kutzner
Merge
branc
h
'
master' of gi
t
@g
i
t
.
groma
c
s
.
org:gromacs
commit
|
commitdiff
|
tree
2010-01-13
Carsten
K
utz
n
e
r
Moved rou
t
ines that collect group coo
r
ds for c
o
mp
a
riso
n
.
.
.
commit
|
commitdiff
|
tree
2009-12-21
Carsten Kut
z
n
e
r
Merge
b
ran
c
h
'
m
as
t
er
'
of git@git
.
gromacs
.
org:g
r
om
a
cs
commit
|
commitdiff
|
tree
2009-12-21
Carsten Kutz
n
er
Essent
i
al dynamics: fixed segfault when using
s
d2 integ
r
ator
commit
|
commitdiff
|
tree
2009-12-21
Carsten Kut
z
ner
Essenti
a
l dynamics: fixed se
g
fault wh
e
n using
s
d
2
i
ntegrator
commit
|
commitdiff
|
tree
2009-11-30
Carsten
K
u
tzner
g_t
u
ne_pme now
do
e
s
p
roper cl
e
anup also
with pul
l
s
i
mulations
commit
|
commitdiff
|
tree
2009-10-21
Ca
r
sten Kutzner
g_tune
_
pme now als
o
accep
t
s < 3 nodes, also out
p
uts
.
.
.
commit
|
commitdiff
|
tree
2009-10-12
Cars
t
en Kutzner
Merge b
r
anc
h
'master' of git@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2009-10-12
Carsten Kutzner
cycle coun
t
ers ca
n
n
ow be r
e
set by a (hidden) mdrun
.
.
.
commit
|
commitdiff
|
tree
2009-09-16
Ca
r
ste
n
K
utzner
M
e
rge
b
ranc
h
'master' o
f
g
it@git
.
grom
a
c
s
.
o
r
g:gro
m
acs
commit
|
commitdiff
|
tree
2009-09-16
Carsten
K
u
t
z
n
er
Fixed fo
r
mat conversion
s
in g
m
x
_tune_p
m
e
.
c
commit
|
commitdiff
|
tree
2009-09-07
Carsten K
u
tzner
Edsam: Adde
d
the possibi
l
ity to
flood towards
a
ce
r
tain
.
.
.
commit
|
commitdiff
|
tree
2009-08-11
Carst
e
n
Kutz
n
er
F
i
xed unin
i
tialized
var
i
able
i
n gmx_tune
_
pme
.
c
commit
|
commitdiff
|
tree
2009-07-30
Ca
r
s
ten
Kut
z
ne
r
Merge br
a
nch '
m
aster' of gi
t
@git
.
g
rom
a
cs
.
o
rg:gr
o
macs
commit
|
commitdiff
|
tree
2009-07-29
C
a
rs
t
en Kutzner
Merge branch 'master' of git@git
.
gromacs
.
org:gro
m
acs
commit
|
commitdiff
|
tree
2009-07-28
Carst
e
n Kutzn
e
r
set
init_step on pm
e
only nodes when counter resetting
.
.
.
commit
|
commitdiff
|
tree
2009-07-27
C
arsten Kutzne
r
Count
e
r re
s
etting also on the
P
ME on
l
y
n
o
d
es
commit
|
commitdiff
|
tree
2009-07-16
Car
s
ten Kut
z
ner
Check md
.
log to
ensu
r
e GMX_RESET_COUNT
E
RS
was passed
.
.
.
commit
|
commitdiff
|
tree
2009-07-15
Carsten
K
utzner
Check
w
hether mpi
r
un
a
c
cep
t
s -
x
option
commit
|
commitdiff
|
tree
2009-07-15
Carsten Kutzner
Merge branch 'master' of git@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2009-07-15
Carsten Kutzner
Several improveme
n
ts to gmx_tun
e
_pme
commit
|
commitdiff
|
tree
2009-07-07
Car
s
ten Kutzner
Merge b
r
a
n
ch 'master' of git@git
.
gromacs
.
org:gromacs
commit
|
commitdiff
|
tree
2009-07-07
Carsten Kutzner
R
emove
d
unus
e
d m_rvec* f
u
nction
s
in vec
.
h (u
n
needed
.
.
.
commit
|
commitdiff
|
tree
2009-07-07
Carsten Kutzner
Made the opt
i
o
nal G
M
X_BA
R
RIERS work wit
h
separ
a
te PM
E
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
Carsten
K
u
tz
n
er
Output the cor
r
ect n
u
mber of files in read_tpr_pullxf_files
commit
|
commitdiff
|
tree
2009-06-23
Carsten Kutzn
e
r
Fix
e
d che
c
k_oo memory c
o
rrupti
o
n problem
commit
|
commitdiff
|
tree
2009-06-22
C
a
r
st
e
n Kutzne
r
Mer
g
e
branch 'master' of git@git
.
g
r
omacs
.
org:g
r
o
m
acs
commit
|
commitdiff
|
tree
2009-06-19
C
a
rste
n
Kutzner
Removed all static va
r
iables
in edsa
m
.
c
commit
|
commitdiff
|
tree