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Refactor error handling in init_gpu
2017-06-26
Szilárd Pá
l
l
Add A
R
M_NEON_A
S
IMD post
-
subm
i
t
t
e
s
t
commit
|
commitdiff
|
tree
2017-06-21
Szilárd
P
á
ll
Re-enable lost D
D
wa
r
ning + minor code modernizatio
n
commit
|
commitdiff
|
tree
2017-06-20
Sz
i
lárd Páll
Re-en
a
b
l
e acc
i
dentally l
o
s
t
DD warn
i
ng
commit
|
commitdiff
|
tree
2017-06-20
Szilá
r
d Pál
l
Refact
o
ring + clarifica
t
ion
o
f
D
LB state
h
an
d
ling
commit
|
commitdiff
|
tree
2017-06-15
Szilá
r
d Páll
Allow disab
l
ing th
e
explicit use of CUDA textures
commit
|
commitdiff
|
tree
2017-06-07
Szilá
r
d Pá
l
l
S
uppress sm_
2
x depreca
t
ion warning with
C
U
D
A 8
.
0
commit
|
commitdiff
|
tree
2017-06-05
Szilárd P
á
ll
Add CUDA 8
.
0 + SIM
D
pre-
s
ubmit test
commit
|
commitdiff
|
tree
2017-06-02
Szilárd P
á
ll
Add ARM_NEON post-submit test
commit
|
commitdiff
|
tree
2017-05-29
S
z
ilárd
P
áll
Quotes ar
e
cool, t
y
po-free
o
ne
s
are ev
e
n "cool
e
r"
commit
|
commitdiff
|
tree
2017-05-23
Szilárd P
á
ll
Ad
d
basi
c
doxygen for the
Verlet nonbo
n
ded m
o
d
u
le
commit
|
commitdiff
|
tree
2017-03-29
Szilárd Páll
R
e
factor CUDA kerne
l
use of t
a
bles
commit
|
commitdiff
|
tree
2017-03-29
Szilárd
P
ál
l
Add
CUDA util function for constant loads
commit
|
commitdiff
|
tree
2017-03-25
Szilár
d
Páll
C
o
n
di
t
i
onal twea
k
in the
n
o
nbonde
d
G
P
U
k
ernels
commit
|
commitdiff
|
tree
2017-03-17
Szilárd Páll
Allow bypass
i
ng Op
e
n
C
L devic
e
compatibil
i
ty c
h
eck
commit
|
commitdiff
|
tree
2017-03-16
Szi
l
árd P
á
ll
Print code of unknown OpenCL error
commit
|
commitdiff
|
tree
2017-03-09
S
z
ilá
r
d Páll
Fix
mdrun hang
i
ng upon exit w
i
th sep PME r
a
nks
commit
|
commitdiff
|
tree
2017-01-24
Szilár
d
Páll
Re
m
ove unused
argume
n
t
in GPU ke
r
n
els
commit
|
commitdiff
|
tree
2016-12-09
Szilárd Páll
Turn of
f
hwloc support whe
n
static lib fou
n
d
commit
|
commitdiff
|
tree
2016-11-17
S
z
ilár
d
Páll
C
o
rr
e
ct kernel launch
bou
n
ds for CUDA
s
m_60
commit
|
commitdiff
|
tree
2016-11-01
Szilár
d
P
á
ll
M
erge
"
Merge
bra
n
ch
r
elease-2016"
commit
|
commitdiff
|
tree
2016-10-28
Szil
á
rd Páll
GPU-related
a
d
dit
i
ons to the install/
u
se
r
guide
commit
|
commitdiff
|
tree
2016-10-27
Szilárd Páll
Mak
e
-
cl-fas
t
-
relax
e
d-math de
f
ault
commit
|
commitdiff
|
tree
2016-10-26
Szi
l
árd Páll
Add GMX
_
DISABLE_GPU_TIMING
env
var
commit
|
commitdiff
|
tree
2016-10-09
Sz
i
l
á
rd Páll
Correct kernel launch bo
u
nds for CU
D
A s
m
_60
commit
|
commitdiff
|
tree
2016-08-27
Szilárd Páll
Make A
S
AN/TSAN
/
MSAN
buil
d
types easier to discover
commit
|
commitdiff
|
tree
2016-07-08
Szil
á
rd Pá
l
l
Add PDF metadata to the manua
l
commit
|
commitdiff
|
tree
2016-07-08
Szilárd
Pá
l
l
Use
r
guide clar
i
fications
commit
|
commitdiff
|
tree
2016-07-07
Szilárd Páll
A
d
d user guide
in
f
o on CU
D
A applica
t
ion clocks
commit
|
commitdiff
|
tree
2016-07-05
Szilárd Páll
Doc
u
ment GMX_GPU_APPLICATION_CLOCKS
commit
|
commitdiff
|
tree
2016-07-04
Szilárd Páll
Dis
a
ble NVIDIA JI
T
cache with OpenCL
commit
|
commitdiff
|
tree
2016-06-14
S
zil
á
rd Páll
F
ix CUDA build
with multi
p
le compilation units
commit
|
commitdiff
|
tree
2016-06-05
Szilárd Páll
Add su
p
port for CUDA C
C
6
.
0
/6
.
1
commit
|
commitdiff
|
tree
2016-06-02
Sz
i
lár
d
Páll
Add
e
nv
.
v
ar
.
to enable OpenCL cac
h
ing
commit
|
commitdiff
|
tree
2016-06-02
S
zil
á
rd Páll
F
ix OpenCL binary cache file
na
m
e gen
e
ration
commit
|
commitdiff
|
tree
2016-05-05
Szilár
d
Páll
Rem
o
ve C
U
DA host compiler consist
e
ncy checks
commit
|
commitdiff
|
tree
2016-04-28
Szilárd Páll
W
orkaround for gcc
f
als
e
positive
warning
commit
|
commitdiff
|
tree
2016-04-27
Szilárd Páll
Fix multiple MPI ranks p
e
r
n
ode with OpenCL
commit
|
commitdiff
|
tree
2016-04-26
Szilárd P
á
ll
Fix OpenCL ass
e
rtion
commit
|
commitdiff
|
tree
2016-04-19
Szilár
d
P
á
ll
M
ove out C
U
DA profile
r
t
rigge
r
s fro
m
N
BNXN
commit
|
commitdiff
|
tree
2016-04-13
S
z
ilárd Pá
l
l
Spelli
n
g fixes
commit
|
commitdiff
|
tree
2016-04-13
S
zilárd Páll
Do not
c
reat
e
empt
y
m
an/man
7
directo
r
y
commit
|
commitdiff
|
tree
2016-04-04
Szi
l
á
r
d Pá
l
l
Mar
k
more v
a
ria
b
l
e
s as adv
a
nc
e
d
commit
|
commitdiff
|
tree
2016-03-31
Szilárd Páll
refactor CUDA texture-b
a
s
e
d tab
l
e
initialization
commit
|
commitdiff
|
tree
2016-03-31
Sz
i
lárd Pá
l
l
F
i
x
multiple tMPI
r
anks per OpenCL device
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Páll
LJ c
o
mbina
t
ion rule kernels for OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szil
á
rd
Páll
R
e-e
n
able i
-
atom type loca
l
mem p
r
efetch
in OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd
P
á
ll
Describe AM
D
APPSDK 3
.
0 issues in the guide
commit
|
commitdiff
|
tree
2016-03-17
Szi
l
á
rd Páll
F
i
xed
OpenCL e/fshift clear k
e
rn
e
l first invocation
commit
|
commitdiff
|
tree
2016-02-26
Szil
á
rd Páll
Fix
l
eft
o
ver
load(
)
call
s
in the simd util
headers
commit
|
commitdiff
|
tree
2016-02-19
Szilárd Páll
Fix OpenCL table interpolations of
Ew
a
ld
c
o
rrect
i
on
commit
|
commitdiff
|
tree
2016-02-17
Sz
i
lárd Pá
l
l
reintroduce
supercl
i
nteract
i
o
n mask constant
commit
|
commitdiff
|
tree
2016-02-17
Szilárd
Páll
chang
e
m
acros to cons
t
ants i
n
GPU code
commit
|
commitdiff
|
tree
2016-02-15
Szilárd
Páll
Allow GMX_NB_MIN_CI=0 to be pas
s
ed
commit
|
commitdiff
|
tree
2016-02-11
Szilár
d
P
á
l
l
R
e
-enable
LJ-PME + Lorentz-Berthelot on GPUs
commit
|
commitdiff
|
tree
2016-02-08
Sz
i
lárd Páll
Handle unif
o
rmly G
M
X_OCL_
N
O
G
ENCA
C
HE
commit
|
commitdiff
|
tree
2016-01-26
S
z
ilárd Pál
l
GPU code reo
r
g
ani
z
a
t
i
on and tweaks
commit
|
commitdiff
|
tree
2016-01-20
Szi
l
árd Páll
Merge
re
m
o
te-tracking br
a
nch
'
o
r
i
gin/release-5-1
'
i
n
to
.
.
.
commit
|
commitdiff
|
tree
2016-01-09
Sz
i
lá
r
d Páll
split NBNXN CU
D
A kernels into four compi
l
ati
o
n uni
t
s
commit
|
commitdiff
|
tree
2015-10-15
Szilárd Páll
Add
CUDA nvcc
>=7
.
0 support
commit
|
commitdiff
|
tree
2015-10-15
S
zilárd Páll
Co
r
r
ect CUDA version comparison
s
commit
|
commitdiff
|
tree
2015-05-06
Szi
l
ár
d
Páll
M
e
r
g
e "Merge re
l
ease-4-6 into re
l
ease-5-0" into release-5-0
commit
|
commitdiff
|
tree
2015-04-21
Szilá
r
d Páll
Allow
m
anually setting t
a
r
g
et GPU architectures
commit
|
commitdiff
|
tree
2015-04-17
Szilárd
Páll
define CUDA ve
r
sion and texobj
s
upport in con
f
i
g
.
h
commit
|
commitdiff
|
tree
2014-11-29
Szilárd Páll
Add
k
er
n
e
l
an
d
compiler s
u
port for CC 3
.
7 d
e
vices
commit
|
commitdiff
|
tree
2014-11-17
Szilárd Páll
Allow increasing CUDA th
r
ead block s
i
z
e
commit
|
commitdiff
|
tree
2014-11-17
Szilárd Páll
A
d
d CUD
A
compiler support f
o
r CC
5
.
0
commit
|
commitdiff
|
tree
2014-11-14
Szil
á
rd P
á
ll
Start
nvprof
p
rofiling at coun
t
e
r reset
commit
|
commitdiff
|
tree
2014-09-26
Szilár
d
Páll
Fi
x
i
n
c
o
rr
e
ct assertion stateme
n
t
commit
|
commitdiff
|
tree
2014-09-09
Szilárd Pá
l
l
Fix malfor
m
ed CUDA version m
a
c
ro
c
heck
commit
|
commitdiff
|
tree
2014-06-01
Sz
i
lárd Páll
Add quote on the kT-k
j
/
m
ol
conv
e
rsion factor
commit
|
commitdiff
|
tree
2014-03-11
Szil
á
rd
Páll
B
ump required C
U
DA vers
i
on to 4
.
0
commit
|
commitdiff
|
tree
2014-01-28
Szilárd Páll
c
l
a
rified OpenMP-rela
t
ed things in mdrun help/ma
n
commit
|
commitdiff
|
tree
2013-11-19
Szilá
r
d P
á
ll
Fix
DD
l
o
a
d balanc
i
ng
bug with GPU sharing
commit
|
commitdiff
|
tree
2013-05-30
Szilárd P
á
ll
fix u
n
necessary switch
to polling GPU wait
commit
|
commitdiff
|
tree
2013-02-10
Szilárd
P
á
l
l
use legac
y
C
UDA non
-
b
o
nded kernels only on Fermi
commit
|
commitdiff
|
tree
2013-01-18
S
zilárd Páll
fi
x
Ope
n
MP detection on Mac O
S
broken
by
a
6
fee0b
commit
|
commitdiff
|
tree
2013-01-17
Szi
l
árd Pá
l
l
added mi
s
sing
cleanu
p
of some nbnxn_cuda
data
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Pál
l
Merge changes
I
930b316
c
,Ie
a
4283e0,I103648f8 into release-4-6
commit
|
commitdiff
|
tree
2013-01-17
S
zilárd Páll
use
the c
o
m
p
i
ler
v
e
rsion provided
b
y
CMake
>
=2
.
8
.
9
commit
|
commitdiff
|
tree
2013-01-17
Szilárd Pál
l
n
o
te the reason
for auto-disabling GPU s
u
p
p
ort in
CMak
e
commit
|
commitdiff
|
tree
2013-01-17
S
z
ilárd Páll
clar
i
f
y wording of GPU
d
river-re
l
ated not
e
s
commit
|
commitdiff
|
tree
2013-01-15
Szilárd Páll
disable OpenMP
w
ith all OS X gcc 4
.
2-based
compilers
commit
|
commitdiff
|
tree
2012-12-19
S
z
ilárd P
á
ll
Merge "Avoid u
s
ing undefined
C
Make vari
a
b
les"
into
.
.
.
commit
|
commitdiff
|
tree
2012-12-19
Sz
i
lárd Páll
M
e
rge "Removed or
p
han file" into
relea
s
e-4-6
commit
|
commitdiff
|
tree
2012-12-17
S
z
ilárd Páll
Mer
g
e "r
e
du
c
ed PLINCS co
m
m
u
nication with H-b
o
nd
c
onstr
a
ints
.
.
.
commit
|
commitdiff
|
tree
2012-11-28
Sz
i
lárd Páll
Merge changes I9b865c4c,Ib70929
0
e into
r
e
l
e
ase-
4
-
6
commit
|
commitdiff
|
tree
2012-11-23
Szilárd Páll
Merge
"Updates to
C
Ma
k
e trea
t
ment of OpenMP" into
r
e
lease-4-6
commit
|
commitdiff
|
tree
2012-10-25
Szilárd Páll
fix false p
o
s
it
i
ve gcc
4
.
7 warning in libxdr
f
commit
|
commitdiff
|
tree
2012-10-24
Szilárd Pá
l
l
enable GM
X
_PREFER_STAT
I
C_LIBS
C
M
ake
option on Ma
c
OS X
commit
|
commitdiff
|
tree
2012-07-03
Szilárd Páll
Merge
"
M
in
o
r formatting and consistency changes
to
.
.
.
commit
|
commitdiff
|
tree
2012-05-25
Szilárd Páll
M
erge "Fix Clang 3
.
1 compi
l
e
error"
commit
|
commitdiff
|
tree
2012-04-26
S
zil
á
rd Páll
Merge
"f
i
xed initia
l
C
OM motion removal
w
i
th multiple
.
.
.
commit
|
commitdiff
|
tree
2012-02-11
Szilár
d
Páll
Me
r
ge changes If0c2f9d9,Ic2a8ad82 into
r
ele
a
se
-
4-5
.
.
.
commit
|
commitdiff
|
tree
2012-02-02
Szilárd
P
áll
M
e
rge "Append al
l
ICC Perform
a
nce flags only
to Rele
a
se
.
.
.
commit
|
commitdiff
|
tree
2012-02-02
S
z
ilárd Páll
M
e
rge "Merges i
n
thread
i
ng branch
a
s one squashed commit
.
.
.
commit
|
commitdiff
|
tree
2011-10-06
Szilárd
Páll
Merge "Removed duplicate
CMake func
t
ionali
t
y"
i
nt
o
.
.
.
commit
|
commitdiff
|
tree