repo.or.cz
/
gromacs.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Merge branch release-2018
2018-03-13
Szi
l
árd Páll
R
e
qui
r
e OpenCL 1
.
2
commit
|
commitdiff
|
tree
2018-03-13
Szilár
d
Páll
Fix
c
lang 6
.
0 with CUDA 9
.
0
commit
|
commitdiff
|
tree
2018-03-12
Szilárd Pál
l
Avoid icc-s
p
ecific -march
=
core-
a
vx2 f
l
ag with gcc
/
c
l
ang
commit
|
commitdiff
|
tree
2018-03-06
Szilárd Páll
Extend "F
i
nding out how to ru
n
m
d
r
u
n
bet
t
er" se
c
tion
commit
|
commitdiff
|
tree
2018-03-05
Szilárd Pál
l
Add
to
t
he contributo
r
section
commit
|
commitdiff
|
tree
2018-02-21
Szilá
r
d P
á
ll
Switch pre-s
u
bmit CUDA 8
.
0 test to 9
.
0
commit
|
commitdiff
|
tree
2018-02-20
S
zilárd Páll
A
v
oid aborting
m
drun when GP
U
s
anity check detects
.
.
.
commit
|
commitdiff
|
tree
2018-02-14
Szilárd
Páll
Remove barriers prevent
i
ng texture reference races
commit
|
commitdiff
|
tree
2018-02-12
Szilár
d
Páll
Re
m
o
v
e single/m
u
lti compilatio
n
unit switching logic
commit
|
commitdiff
|
tree
2018-02-12
Szilárd Páll
Rem
o
ve texture
r
eferen
c
e suppo
r
t in the
CUDA
commit
|
commitdiff
|
tree
2018-01-12
Szilár
d
Páll
Call
GPU
p
rofiler reset on se
p
arate
P
M
E
ranks
commit
|
commitdiff
|
tree
2018-01-10
Szilárd Páll
User guide updates t
o
G
P
U sec
t
ion
commit
|
commitdiff
|
tree
2018-01-10
Szilárd Páll
Release
n
ot
e
s twe
a
ks
commit
|
commitdiff
|
tree
2018-01-10
Szil
á
rd Páll
Install guide updates
commit
|
commitdiff
|
tree
2018-01-10
Szilárd Pál
l
Environment v
a
r
i
able docs m
a
i
n
tenance
commit
|
commitdiff
|
tree
2017-12-10
Szilárd Páll
Dis
a
ble defa
u
l
t-on N
V
ML
s
upport in CMa
k
e
commit
|
commitdiff
|
tree
2017-12-06
Sz
i
lárd Pá
l
l
Im
p
lement altern
a
ting GPU w
a
i
t
commit
|
commitdiff
|
tree
2017-11-28
Szil
á
rd
Páll
Separate l
o
ca
l
GPU NB wait
f
ro
m
emula
t
ion laun
c
h
commit
|
commitdiff
|
tree
2017-11-28
Szi
l
árd
Páll
Refac
t
or GPU rolli
n
g prune la
u
nch
commit
|
commitdiff
|
tree
2017-11-27
S
z
i
lárd Páll
Time FFT/g
a
t
h
e
r
i
n mixed mode
commit
|
commitdiff
|
tree
2017-11-24
Szilárd Páll
A
d
d
GPU sharing post-su
b
m
i
t
config
commit
|
commitdiff
|
tree
2017-11-23
Szilárd Páll
Mo
v
e
GPU FFT/gather launc
h
a
fter GPU nonbond
e
ds
commit
|
commitdiff
|
tree
2017-11-07
Szilár
d
Páll
Use
-m
a
vx2 -mfma inste
a
d
o
f
-ma
r
ch wi
t
h
A
VX2
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Páll
M
e
rge common
n
b
n
x
n
C
UDA/OpenCL GPU
wait
c
od
e
-paths
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Páll
Add wallcycle timer
for the P
M
E GPU F r
e
duction
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Páll
Spl
i
t off nbnxn GPU
t
i
ming and sta
g
ing reduction
commit
|
commitdiff
|
tree
2017-11-07
Szil
á
r
d
Páll
Deduplicate CUDA and OpenCL
t
imer struct
commit
|
commitdiff
|
tree
2017-10-31
Szil
á
r
d
Páll
Fix
n
stlist increase warning pri
n
t
commit
|
commitdiff
|
tree
2017-10-31
Sz
i
l
árd Pá
l
l
Check CUDA
av
a
ilable/compil
e
d
co
d
e
c
ompa
t
ibili
t
y
commit
|
commitdiff
|
tree
2017-10-31
Szilárd Pál
l
Fix
ns
t
li
s
t incre
a
se warning print
commit
|
commitdiff
|
tree
2017-10-26
Szilárd Páll
Reor
g
an
i
z
e
PM
E
GPU launch
commit
|
commitdiff
|
tree
2017-10-23
Sz
i
lárd
P
áll
Eliminate some
OCL/CU
D
A code
c
ode dup
l
ication
commit
|
commitdiff
|
tree
2017-10-19
S
z
ilárd Pál
l
D
i
sable OpenMP with cla
n
g
3
.
4
p
ost-submi
t
con
f
ig
commit
|
commitdiff
|
tree
2017-10-19
Szilárd
P
áll
Remove unised OpenCL debuggi
n
g h
e
lpers
commit
|
commitdiff
|
tree
2017-10-12
Szilá
r
d Pál
l
R
emove the size_t
from the PME gath
e
r
CUDA
k
enels
commit
|
commitdiff
|
tree
2017-10-05
Szilárd Páll
Refact
o
r
scaled
box
h
andlin
g
for PME/Ewald
commit
|
commitdiff
|
tree
2017-10-05
Szilárd P
á
l
l
F
ix pair list array assertion
commit
|
commitdiff
|
tree
2017-10-05
Szilárd
P
áll
Avoid -Wmissi
n
g
-prototypes war
n
i
n
g
s in clang CUDA bui
l
ds
commit
|
commitdiff
|
tree
2017-10-03
Szilárd Páll
Move
E
wald splitting-relat
e
d
c
o
d
e to ewald
-
ut
i
ls
commit
|
commitdiff
|
tree
2017-10-03
Sz
i
lárd Páll
Enable
c
o
m
pili
n
g C
U
DA device c
o
de with clang
commit
|
commitdiff
|
tree
2017-09-28
Szilárd Páll
Correct
m
isp
l
aced CUDA timing eve
n
t
r
ecord
commit
|
commitdiff
|
tree
2017-09-26
Szilá
r
d Páll
R
e
name GPU
l
a
u
nch/
w
ait c
y
c
l
e count
e
rs
commit
|
commitdiff
|
tree
2017-09-18
S
zil
á
rd Páll
Mi
n
o
r
ref
a
cto
r
ing of
CUDA non-bonded kernels
commit
|
commitdiff
|
tree
2017-09-14
Szi
l
árd Pá
l
l
CUDA 9/Volta sup
p
ort
f
o
r
t
he p
r
uning kernel
commit
|
commitdiff
|
tree
2017-09-12
Szilárd Páll
Mer
g
e branch 'r
e
l
e
ase-2016'
commit
|
commitdiff
|
tree
2017-09-11
Szilár
d
Páll
NVIDIA Volta performance tw
e
aks
commit
|
commitdiff
|
tree
2017-08-29
Szilárd Páll
Fix typo
a
n
d
tweak e
n
v v
a
r docs
commit
|
commitdiff
|
tree
2017-08-29
Sz
i
lár
d
Páll
Avoi
d
division by zero
i
s pruni
n
g part calculation
commit
|
commitdiff
|
tree
2017-08-21
Szilár
d
P
áll
Add OpenCL pru
n
ing kernels and launch/timing logic
commit
|
commitdiff
|
tree
2017-08-18
Szilá
r
d Páll
Impr
o
ve awkwa
r
d
hand
l
in
g
of GMX
_
C
UDA_TARGET* he
l
p
commit
|
commitdiff
|
tree
2017-08-18
Szilárd Páll
Add CUDA pruni
n
g kernels and launch/timing logic
commit
|
commitdiff
|
tree
2017-07-27
S
z
ilárd Páll
I
nform users
abo
u
t the end of run DLB s
t
ate
commit
|
commitdiff
|
tree
2017-06-26
Szilárd Páll
Add
ARM_NEON_ASIMD post-submit test
commit
|
commitdiff
|
tree
2017-06-21
Szilárd Páll
Re-enable lost DD w
a
rning + minor c
o
d
e mo
d
ern
i
zati
o
n
commit
|
commitdiff
|
tree
2017-06-20
Szilárd Páll
Re-enable accidenta
l
ly lost DD warnin
g
commit
|
commitdiff
|
tree
2017-06-20
Szilárd Páll
R
e
f
actoring + clari
f
icatio
n
of
D
LB st
a
te handling
commit
|
commitdiff
|
tree
2017-06-15
Szilá
r
d
P
áll
Allow di
s
abling the explicit use of CU
D
A textur
e
s
commit
|
commitdiff
|
tree
2017-06-07
Szilárd Páll
Su
p
press s
m
_2x
d
eprecatio
n
warning wit
h
CUDA
8
.
0
commit
|
commitdiff
|
tree
2017-06-05
Szilárd Páll
Add CUDA
8
.
0
+ SIM
D
p
re-su
b
mi
t
t
e
st
commit
|
commitdiff
|
tree
2017-06-02
Szilá
r
d Páll
Add ARM_NEON post
-
submit
test
commit
|
commitdiff
|
tree
2017-05-29
Sz
i
lárd Páll
Quote
s
are cool,
typo-free
o
n
es are even "cooler
"
commit
|
commitdiff
|
tree
2017-05-23
Szi
l
árd Páll
Add
b
asic dox
y
gen for the V
e
rlet nonb
o
nded mo
d
ul
e
commit
|
commitdiff
|
tree
2017-03-29
Szi
l
á
rd Páll
Refac
t
or CUDA kernel use
o
f tables
commit
|
commitdiff
|
tree
2017-03-29
Szi
l
árd Pá
l
l
Add CUD
A
ut
i
l functi
o
n for c
o
nstant loads
commit
|
commitdiff
|
tree
2017-03-25
Szilárd Páll
C
o
nditional tweak in
the nonbond
e
d GPU kernels
commit
|
commitdiff
|
tree
2017-03-17
Szilár
d
P
á
l
l
Allow bypassing OpenCL
d
evice c
o
m
p
atibility c
h
eck
commit
|
commitdiff
|
tree
2017-03-16
Szi
l
árd Páll
Print code o
f
u
n
know
n
Open
C
L error
commit
|
commitdiff
|
tree
2017-03-09
Szilárd Páll
Fix mdrun ha
n
ging upon
e
x
i
t
with
s
ep PM
E
ranks
commit
|
commitdiff
|
tree
2017-01-24
Szilárd Páll
Rem
o
ve un
u
sed
argument in
GPU kernels
commit
|
commitdiff
|
tree
2016-12-09
Sz
i
lárd Páll
T
u
r
n off hwloc s
u
pport
w
h
en static lib found
commit
|
commitdiff
|
tree
2016-11-17
S
z
ilárd Páll
Correct kernel
l
aunch bounds for CUD
A
s
m
_
6
0
commit
|
commitdiff
|
tree
2016-11-01
Szilárd Páll
Merge
"
Merge branch
rele
a
s
e
-2016"
commit
|
commitdiff
|
tree
2016-10-28
S
z
ilárd
Páll
GP
U
-related ad
d
itions t
o
the i
n
s
tall/u
s
e
r gui
d
e
commit
|
commitdiff
|
tree
2016-10-27
Szilárd Páll
Make
-cl-fast-relaxed
-
math default
commit
|
commitdiff
|
tree
2016-10-26
Szilá
r
d Páll
A
d
d GMX_DI
S
ABLE_GPU_
T
IMI
N
G e
n
v
v
ar
commit
|
commitdiff
|
tree
2016-10-09
Szilárd Páll
Correct kernel la
u
nch bounds f
o
r CUDA
sm_60
commit
|
commitdiff
|
tree
2016-08-27
Szilárd Pál
l
Make ASAN/TSAN/MSAN buil
d
t
y
pes easier to di
s
co
v
er
commit
|
commitdiff
|
tree
2016-07-08
Szilárd Páll
Add
P
DF metadata to the
manu
a
l
commit
|
commitdiff
|
tree
2016-07-08
Sz
i
lár
d
Páll
User guide clarifications
commit
|
commitdiff
|
tree
2016-07-07
Szi
l
árd Páll
Add user guide info on
C
UDA a
p
plication cloc
k
s
commit
|
commitdiff
|
tree
2016-07-05
Szilárd Páll
Document GMX_GPU_APPLI
C
ATION_CLOCKS
commit
|
commitdiff
|
tree
2016-07-04
S
z
ilár
d
Páll
D
i
sable NVIDIA JIT c
a
c
he
w
i
th OpenCL
commit
|
commitdiff
|
tree
2016-06-14
Szi
l
árd Páll
Fix CUD
A
build
with m
u
ltiple
c
ompilatio
n
units
commit
|
commitdiff
|
tree
2016-06-05
Szilárd Páll
Add
s
upport for CU
D
A CC
6
.
0/6
.
1
commit
|
commitdiff
|
tree
2016-06-02
Sz
i
lárd
Páll
A
d
d env
.
var
.
to enable
O
penCL cachi
n
g
commit
|
commitdiff
|
tree
2016-06-02
Szilárd Páll
Fix OpenCL binary cache file
n
ame genera
t
ion
commit
|
commitdiff
|
tree
2016-05-05
Sz
i
l
ár
d
P
á
ll
Remove CUDA host c
o
mpiler consi
s
te
n
cy
c
he
c
ks
commit
|
commitdiff
|
tree
2016-04-28
Szilár
d
Páll
Work
a
round for gcc false positive warning
commit
|
commitdiff
|
tree
2016-04-27
S
z
ilárd Páll
F
ix mul
t
i
p
l
e MPI ranks p
e
r node with OpenCL
commit
|
commitdiff
|
tree
2016-04-26
S
zilá
r
d P
á
ll
Fix OpenC
L
ass
e
rtio
n
commit
|
commitdiff
|
tree
2016-04-19
S
zilárd Pá
l
l
Move
o
ut CUDA profil
e
r trigge
r
s
from
N
BNXN
commit
|
commitdiff
|
tree
2016-04-13
Szilárd
P
áll
Spelling
f
i
x
es
commit
|
commitdiff
|
tree
2016-04-13
Szilárd Páll
Do
not create emp
t
y man/ma
n
7 directory
commit
|
commitdiff
|
tree
2016-04-04
Sz
i
l
á
rd
Páll
Mark
more v
a
riables a
s
advan
c
ed
commit
|
commitdiff
|
tree
2016-03-31
Szilárd Páll
re
f
actor CUD
A
t
e
xture-bas
e
d table ini
t
ialization
commit
|
commitdiff
|
tree
2016-03-31
Szil
á
r
d
Páll
F
i
x multiple tMPI ra
n
k
s
per
O
penC
L
device
commit
|
commitdiff
|
tree
2016-03-30
S
zilárd Páll
LJ com
b
i
n
ation rule kernels for Op
e
nCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Pál
l
R
e-enab
l
e i-atom
type l
o
c
al m
e
m prefetch
in
O
penCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Páll
D
esc
r
ib
e
AMD APPS
D
K
3
.
0 issues in
the
g
ui
d
e
commit
|
commitdiff
|
tree
2016-03-17
Sz
i
lárd Páll
Fixed OpenCL e/fs
h
i
ft c
l
ear k
e
rnel first invo
c
ation
commit
|
commitdiff
|
tree
next