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Remove already resolved post-submit matrix TODO
2018-02-14
Szi
l
á
r
d
Páll
R
e
move barriers preve
n
tin
g
tex
t
ure
r
e
ference races
commit
|
commitdiff
|
tree
2018-02-12
Szilár
d
Páll
Remove single/multi compila
t
ion unit swit
c
hing logic
commit
|
commitdiff
|
tree
2018-02-12
Szilárd
P
áll
Remove te
x
ture
refer
e
nce s
u
p
p
ort in the
CUDA
commit
|
commitdiff
|
tree
2018-01-12
S
zilárd
P
áll
Call G
P
U
profile
r
rese
t
o
n sep
a
rate PME ranks
commit
|
commitdiff
|
tree
2018-01-10
Szilárd
P
áll
Use
r
guide upd
a
t
es to GPU section
commit
|
commitdiff
|
tree
2018-01-10
Szi
l
árd Páll
Release n
o
tes tweaks
commit
|
commitdiff
|
tree
2018-01-10
Szil
á
rd
P
áll
Install guide updates
commit
|
commitdiff
|
tree
2018-01-10
Szi
l
árd Páll
E
n
v
ironm
e
nt variable docs ma
i
nte
n
a
nce
commit
|
commitdiff
|
tree
2017-12-10
Szilárd Páll
Di
s
able
defaul
t
-on NVML support in CMake
commit
|
commitdiff
|
tree
2017-12-06
Sz
i
lár
d
Páll
Implemen
t
alternating GPU w
a
i
t
commit
|
commitdiff
|
tree
2017-11-28
Szil
á
rd Pál
l
Se
p
a
r
at
e
local
G
PU
N
B wa
i
t from emu
l
a
t
i
o
n la
u
nch
commit
|
commitdiff
|
tree
2017-11-28
Szilár
d
Páll
R
e
f
actor
G
P
U r
o
lling
p
rune la
u
n
ch
commit
|
commitdiff
|
tree
2017-11-27
Szilárd Páll
Time FFT
/
gather in mixed mode
commit
|
commitdiff
|
tree
2017-11-24
Szi
l
árd Páll
Add GPU sharing
p
ost-submit
config
commit
|
commitdiff
|
tree
2017-11-23
Szi
l
árd Pál
l
Move GPU FFT/gather launc
h
af
t
e
r
GPU nonbondeds
commit
|
commitdiff
|
tree
2017-11-07
Szil
á
rd Páll
U
s
e -mavx2 -mfma instead of -march with A
V
X2
commit
|
commitdiff
|
tree
2017-11-07
Szilá
r
d
Páll
Merge comm
o
n nbnxn CUDA/OpenCL GPU
w
ait code-paths
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Páll
Add
w
allcycle tim
e
r
for the PME GPU F reduction
commit
|
commitdiff
|
tree
2017-11-07
Szilárd Páll
S
p
l
i
t off
n
bnxn GPU timing and stagi
n
g reduction
commit
|
commitdiff
|
tree
2017-11-07
Szilár
d
P
á
ll
Deduplicate CUDA
a
nd OpenCL timer struc
t
commit
|
commitdiff
|
tree
2017-10-31
Szilárd P
á
ll
F
ix nstlist increase war
n
ing pri
n
t
commit
|
commitdiff
|
tree
2017-10-31
Szilárd Páll
Check CUD
A
availabl
e
/compiled code c
o
mpatibility
commit
|
commitdiff
|
tree
2017-10-31
S
z
i
l
árd Páll
Fi
x
nstlist increase warni
n
g print
commit
|
commitdiff
|
tree
2017-10-26
Szilárd Páll
R
eorga
n
ize PME GPU launch
commit
|
commitdiff
|
tree
2017-10-23
Szilárd Páll
Eliminate some OC
L
/
C
UDA
co
d
e code du
p
lication
commit
|
commitdiff
|
tree
2017-10-19
Szilár
d
Páll
Disable Op
e
nMP w
i
th c
l
ang 3
.
4 po
s
t
-subm
i
t config
commit
|
commitdiff
|
tree
2017-10-19
Sz
i
lár
d
Páll
Remove unised O
p
e
n
CL deb
u
gging h
e
lpers
commit
|
commitdiff
|
tree
2017-10-12
Szilá
r
d Páll
Re
m
o
ve the
s
i
z
e_t from
t
he
P
ME gather CUD
A
kenels
commit
|
commitdiff
|
tree
2017-10-05
S
z
ilárd Páll
Re
f
actor scale
d
b
ox handling for PME/Ewald
commit
|
commitdiff
|
tree
2017-10-05
S
zilárd Páll
Fix
pair list array assertion
commit
|
commitdiff
|
tree
2017-10-05
Szilá
r
d
Páll
Avoid -Wmissi
n
g-prototy
p
e
s
warni
n
g
s
i
n clang CUDA builds
commit
|
commitdiff
|
tree
2017-10-03
Szil
á
rd Páll
Move
Ew
a
ld splitti
n
g-relat
e
d
c
od
e
to ewa
l
d-utils
commit
|
commitdiff
|
tree
2017-10-03
Szilá
r
d Páll
E
nable compi
l
ing
C
UDA
d
e
v
ice code with
clang
commit
|
commitdiff
|
tree
2017-09-28
S
zilárd Páll
Correct misp
l
ac
e
d CUDA timing e
v
ent record
commit
|
commitdiff
|
tree
2017-09-26
Szilárd Páll
Rena
m
e GPU launch/wait cycle counters
commit
|
commitdiff
|
tree
2017-09-18
Szilárd Páll
M
in
o
r refactoring of C
U
DA
n
on-bonded kernels
commit
|
commitdiff
|
tree
2017-09-14
Sz
i
lárd P
á
ll
CUDA 9/Vo
l
t
a support
fo
r
the pruning kerne
l
commit
|
commitdiff
|
tree
2017-09-12
Szilárd Páll
Merge
bra
n
ch 'release
-
2016
'
commit
|
commitdiff
|
tree
2017-09-11
S
z
i
lárd Pá
l
l
N
VIDIA Volta perfo
r
mance tweaks
commit
|
commitdiff
|
tree
2017-08-29
Szilá
r
d Páll
Fix typo and
tw
e
ak env var docs
commit
|
commitdiff
|
tree
2017-08-29
Szilárd P
á
ll
Avoid d
i
v
i
s
i
on b
y
ze
r
o is pruning par
t
c
a
lcu
l
ation
commit
|
commitdiff
|
tree
2017-08-21
Szilárd Páll
Add Ope
n
CL pruning kernels and launch/timing logi
c
commit
|
commitdiff
|
tree
2017-08-18
Szilárd Páll
Improve awkward handling of GMX
_
CUDA_TARGET* help
commit
|
commitdiff
|
tree
2017-08-18
S
zilárd Pál
l
Add CUDA pru
n
i
ng ke
r
nels
and launch/ti
m
ing logic
commit
|
commitdiff
|
tree
2017-07-27
Szi
l
árd P
á
ll
Inform users about
the end of
run DLB sta
t
e
commit
|
commitdiff
|
tree
2017-06-26
Szilárd P
á
l
l
Add ARM_NEO
N
_
ASIM
D
post
-
submit tes
t
commit
|
commitdiff
|
tree
2017-06-21
S
z
ilárd Páll
Re-e
n
a
b
l
e lost DD warning + m
i
n
or code mod
e
rnization
commit
|
commitdiff
|
tree
2017-06-20
Szilárd P
á
ll
Re-ena
b
le acc
i
dentally lost DD war
n
ing
commit
|
commitdiff
|
tree
2017-06-20
S
z
ilárd Páll
Refac
t
oring + clarific
a
t
i
on of
DLB state
h
an
d
ling
commit
|
commitdiff
|
tree
2017-06-15
Szi
l
á
r
d Páll
Allow disabling the explicit
u
se of CUDA textures
commit
|
commitdiff
|
tree
2017-06-07
S
z
ilár
d
Pá
l
l
S
u
p
press sm
_
2x depreca
t
ion wa
r
ning wit
h
CUDA 8
.
0
commit
|
commitdiff
|
tree
2017-06-05
Szilár
d
Páll
Ad
d
CUDA 8
.
0
+ SIMD pre-submit
te
s
t
commit
|
commitdiff
|
tree
2017-06-02
Sz
i
lárd
P
áll
Add ARM_NEON pos
t
-s
u
bmit test
commit
|
commitdiff
|
tree
2017-05-29
Szilárd Páll
Q
uotes are
c
ool,
typo-free ones are even "cooler"
commit
|
commitdiff
|
tree
2017-05-23
Szilárd P
á
ll
Add bas
i
c doxygen
f
or t
h
e Verlet nonbonded modul
e
commit
|
commitdiff
|
tree
2017-03-29
Szilárd Páll
Refa
c
tor CUDA kernel use of tabl
e
s
commit
|
commitdiff
|
tree
2017-03-29
S
zilárd Pál
l
Add
C
U
D
A util function fo
r
con
s
tant loads
commit
|
commitdiff
|
tree
2017-03-25
S
z
il
á
rd Páll
Conditional tweak in the nonbond
e
d GPU
k
ernels
commit
|
commitdiff
|
tree
2017-03-17
Szilárd
P
á
l
l
Allow bypassing OpenCL device compatibility che
c
k
commit
|
commitdiff
|
tree
2017-03-16
S
z
ilárd
Pá
l
l
Print code of unknown OpenCL error
commit
|
commitdiff
|
tree
2017-03-09
Szilá
r
d Páll
Fix mdrun han
g
ing upon exit w
i
th sep
P
ME ranks
commit
|
commitdiff
|
tree
2017-01-24
Szilárd Páll
Remove unused arg
u
me
n
t in GPU kerne
l
s
commit
|
commitdiff
|
tree
2016-12-09
S
z
i
lárd Páll
Tu
r
n
o
ff hwloc support
w
hen static lib fo
u
n
d
commit
|
commitdiff
|
tree
2016-11-17
Szilárd Páll
Correct kernel launc
h
b
o
u
n
ds for CUDA sm_60
commit
|
commitdiff
|
tree
2016-11-01
Szilárd Pál
l
Merg
e
"Merge branch release
-
2016"
commit
|
commitdiff
|
tree
2016-10-28
Sz
i
lárd Páll
GPU-related additions t
o
the install/user g
u
ide
commit
|
commitdiff
|
tree
2016-10-27
Sz
i
lá
r
d Páll
Ma
k
e
-c
l
-
fast-relaxed-math
d
efault
commit
|
commitdiff
|
tree
2016-10-26
S
z
ilárd Páll
Add GMX_DISABLE_GPU_TIMING env var
commit
|
commitdiff
|
tree
2016-10-09
Szilárd Páll
Correct
k
e
r
n
el
l
a
u
nch bounds fo
r
CUDA sm
_
60
commit
|
commitdiff
|
tree
2016-08-27
Sz
i
lár
d
Páll
Ma
k
e
A
SAN/
T
SAN/MSAN
b
u
i
l
d
typ
e
s e
a
sier to
d
i
scover
commit
|
commitdiff
|
tree
2016-07-08
Szilárd Páll
A
dd
P
DF metadata
t
o
the manua
l
commit
|
commitdiff
|
tree
2016-07-08
S
z
ilárd P
á
ll
U
ser
g
uide clarific
a
ti
o
ns
commit
|
commitdiff
|
tree
2016-07-07
Szilárd Páll
A
d
d user guide info on CUDA ap
p
lication
clocks
commit
|
commitdiff
|
tree
2016-07-05
Szilárd Páll
D
o
cum
e
nt GMX_GPU_APPLICA
T
I
ON_CLOCKS
commit
|
commitdiff
|
tree
2016-07-04
Szilárd Pá
l
l
Disable NVI
D
IA JIT cache with OpenCL
commit
|
commitdiff
|
tree
2016-06-14
S
z
ilá
r
d
Páll
F
ix C
U
DA bui
l
d wit
h
mul
t
iple co
m
pilation units
commit
|
commitdiff
|
tree
2016-06-05
Szilárd Páll
Add suppor
t
for CUDA CC 6
.
0/6
.
1
commit
|
commitdiff
|
tree
2016-06-02
Szilárd P
á
l
l
Add env
.
var
.
to enabl
e
OpenCL c
a
ching
commit
|
commitdiff
|
tree
2016-06-02
Szil
á
rd P
á
ll
F
i
x OpenCL
bin
a
ry ca
c
he file name generatio
n
commit
|
commitdiff
|
tree
2016-05-05
Szilárd Páll
Remove CUDA host
c
o
m
p
i
l
e
r
c
o
nsistency
checks
commit
|
commitdiff
|
tree
2016-04-28
Szilárd Páll
Workarou
n
d for gcc false
p
osit
i
ve warnin
g
commit
|
commitdiff
|
tree
2016-04-27
Szilárd Páll
Fix m
u
ltiple MPI ra
n
ks
p
er
n
ode wi
t
h Open
C
L
commit
|
commitdiff
|
tree
2016-04-26
Szilárd
P
á
ll
Fix
O
penCL a
s
sertion
commit
|
commitdiff
|
tree
2016-04-19
Szilár
d
P
á
l
l
Move out CUDA profiler trig
g
ers fro
m
NBNXN
commit
|
commitdiff
|
tree
2016-04-13
Szilá
r
d Páll
Sp
e
lling fixes
commit
|
commitdiff
|
tree
2016-04-13
Szil
á
rd Páll
Do not create
empty man/man7 di
r
ectory
commit
|
commitdiff
|
tree
2016-04-04
Szilár
d
Pá
l
l
Mark
more varia
b
le
s
as ad
v
a
n
c
e
d
commit
|
commitdiff
|
tree
2016-03-31
S
z
i
lárd P
á
ll
ref
a
c
t
or C
U
DA t
e
xture-
b
ase
d
table
ini
t
ialization
commit
|
commitdiff
|
tree
2016-03-31
Szi
l
ár
d
Pál
l
Fix m
u
lt
i
ple tM
P
I ra
n
k
s
p
er OpenCL device
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Pá
l
l
LJ combin
a
tion
rule kernels for OpenCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd
P
áll
Re
-
enabl
e
i-atom t
y
pe
lo
c
a
l me
m
prefetch in
O
penCL
commit
|
commitdiff
|
tree
2016-03-30
Szilárd Páll
Des
c
ribe AMD APPSDK 3
.
0 issues in
the guide
commit
|
commitdiff
|
tree
2016-03-17
Szilár
d
Pál
l
Fixed
O
p
e
n
C
L
e
/f
s
h
i
ft cle
a
r kernel first invocation
commit
|
commitdiff
|
tree
2016-02-26
Szilá
r
d
Páll
Fix leftover
load() calls in the simd util header
s
commit
|
commitdiff
|
tree
2016-02-19
Szi
l
árd Páll
Fix
O
p
enC
L
table interpolations of E
w
a
l
d corr
e
cti
o
n
commit
|
commitdiff
|
tree
2016-02-17
Szil
á
rd P
á
ll
reintrodu
c
e supe
r
cl interaction mask
consta
n
t
commit
|
commitdiff
|
tree
2016-02-17
Szilárd Páll
change macr
o
s to constants
i
n GPU
c
ode
commit
|
commitdiff
|
tree
2016-02-15
Szi
l
árd Páll
Allow
GMX_N
B
_MIN_CI=0 to be passed
commit
|
commitdiff
|
tree
2016-02-11
Szilárd Páll
Re-ena
b
le
LJ-PM
E
+ Lor
e
n
tz
-
Berthelot on G
P
U
s
commit
|
commitdiff
|
tree
2016-02-08
Szilárd
P
áll
Handle uniformly GMX_OCL_N
O
GENCA
C
HE
commit
|
commitdiff
|
tree
next