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Enable printing of known issues in commandline
2019-04-17
Paul
Bauer
En
a
b
le p
r
inting of known issue
s
in comm
a
ndlin
e
commit
|
commitdiff
|
tree
2019-04-17
Paul Bauer
Create gm
x
::compat::string_vie
w
commit
|
commitdiff
|
tree
2019-04-16
Paul Baue
r
Refactor t_pindex
commit
|
commitdiff
|
tree
2019-04-07
Paul Bau
e
r
Remov
e
t_t
o
pology from two p
r
eprocess tools
commit
|
commitdiff
|
tree
2019-04-04
Paul Ba
u
er
U
pdate developer guide for changes to Gerrit
commit
|
commitdiff
|
tree
2019-04-03
Paul
B
a
uer
Fix post submit
commit
|
commitdiff
|
tree
2019-04-02
P
aul
B
auer
Re
f
actor gpp_bond_atom
t
ype
commit
|
commitdiff
|
tree
2019-04-02
Paul Bauer
Add std::string cas
e
insensitive
c
ompa
r
e
commit
|
commitdiff
|
tree
2019-04-02
P
aul
B
auer
Re
f
actor gmx_
g
roup_t to S
i
mul
a
t
ionAtomGroups
commit
|
commitdiff
|
tree
2019-04-02
Paul Bauer
F
i
x
simulated annealing and add test
commit
|
commitdiff
|
tree
2019-03-22
Paul Bauer
A
dd sim
p
le test
s
fo
r
sy
m
bol table
commit
|
commitdiff
|
tree
2019-03-20
Paul Ba
u
e
r
Add sim
p
le test to
p
reprocess bond atom typ
e
commit
|
commitdiff
|
tree
2019-03-20
P
aul Bauer
Add test for string c
o
mparison
commit
|
commitdiff
|
tree
2019-03-19
Paul
Bau
e
r
Fix case insensiti
v
e string compar
i
son
commit
|
commitdiff
|
tree
2019-03-18
Paul Bauer
Simpl
e
tes
t
s for C
-
style str
i
ng comparison
commit
|
commitdiff
|
tree
2019-03-13
P
a
ul Bau
e
r
Add tests for
p
rep
r
ocess
atom t
y
pes
commit
|
commitdiff
|
tree
2019-03-13
P
aul Bauer
R
e
move c
u
stom
d
atastruct
u
re in vsite preprocessing
commit
|
commitdiff
|
tree
2019-03-13
P
a
u
l
B
a
uer
Fi
x
errors caused by automatic
r
ebase
commit
|
commitdiff
|
tree
2019-03-13
P
aul Bauer
R
e
factor t_param to InteractionTy
p
e
commit
|
commitdiff
|
tree
2019-03-08
Paul Baue
r
R
efactor pre
p
roce
s
sing atom types
.
commit
|
commitdiff
|
tree
2019-03-08
Paul Bauer
Minor refact
o
ring in v
s
ite_parm
commit
|
commitdiff
|
tree
2019-03-04
Paul Baue
r
Mer
g
e "Merg
e
bran
c
h
release-2019"
commit
|
commitdiff
|
tree
2019-02-27
Paul Ba
u
er
Refactor t_
p
arams to InteractionTypeParameters
commit
|
commitdiff
|
tree
2019-02-25
Pau
l
Bauer
Refactor
ExclusionBlock
s
commit
|
commitdiff
|
tree
2019-02-22
Pa
u
l Bauer
Add tes
t
s
for Exclusio
n
Bl
o
cks
commit
|
commitdiff
|
tree
2019-02-21
Paul Bauer
Reorganize
r
e
l
e
a
se n
o
tes
commit
|
commitdiff
|
tree
2019-02-21
Paul Bauer
Refactor t_molinfo to Molecul
e
Information class
commit
|
commitdiff
|
tree
2019-02-20
Paul
Bauer
Mer
g
e "Merge branch 'r
e
le
a
s
e-2019' int
o
master"
commit
|
commitdiff
|
tree
2019-02-20
Pa
u
l
B
auer
Merge
b
r
a
nch 'release
-
2
0
19' into mast
e
r
commit
|
commitdiff
|
tree
2019-02-20
Paul Baue
r
Fix release notes for
m
atting
commit
|
commitdiff
|
tree
2019-02-19
Paul Ba
u
e
r
Prepare for
2019
.
2
commit
|
commitdiff
|
tree
2019-02-15
Paul
Bauer
Fix memory leaks in e
d
itco
n
f
commit
|
commitdiff
|
tree
2019-02-15
Paul Bau
e
r
Fix memory issues in pr
e
proces
s
commit
|
commitdiff
|
tree
2019-02-15
Paul
Bauer
Refactor vsite topology
commit
|
commitdiff
|
tree
2019-02-15
Paul
B
auer
Version 2019
.
1
commit
|
commitdiff
|
tree
2019-02-15
Paul Ba
u
er
Fix tune_pm
e
commit
|
commitdiff
|
tree
2019-02-13
Paul Ba
u
er
R
e
factor r
t
p
r
enam
i
ng
commit
|
commitdiff
|
tree
2019-02-13
P
aul Bauer
Move si
m
ulat
e
d tempering
d
efault
setting
commit
|
commitdiff
|
tree
2019-02-12
Paul Bauer
Refactor special b
o
nds
commit
|
commitdiff
|
tree
2019-02-12
Pa
u
l Bauer
Refactor t_rb
o
n
d
e
d and t_rbondeds
commit
|
commitdiff
|
tree
2019-02-12
Paul Bauer
Refactor t
_
re
s
tp
commit
|
commitdiff
|
tree
2019-02-11
P
aul Bauer
Refa
c
t
or t_hack to MoleculePatches
commit
|
commitdiff
|
tree
2019-02-11
Pa
u
l Baue
r
Fi
x
bug
in residue type read
i
n
g
commit
|
commitdiff
|
tree
2019-02-09
Pa
u
l Bauer
Change nightly matr
i
x label to
n
o
t
use hwloc
commit
|
commitdiff
|
tree
2019-02-06
P
a
ul Bauer
Refact
o
r
t_hac
k
b
l
o
ck
commit
|
commitdiff
|
tree
2019-02-04
P
aul
B
auer
Fix segmenta
t
ion
fau
l
t in mini
m
ize
commit
|
commitdiff
|
tree
2019-01-24
Paul Baue
r
Change
gcov
to r
u
n on bs-mic
commit
|
commitdiff
|
tree
2019-01-24
Paul B
a
uer
C
han
g
e gcov t
o
ru
n
on bs-mic
commit
|
commitdiff
|
tree
2019-01-23
Paul Bauer
Fi
x
bug introdu
c
ed in 9c2eb03b
commit
|
commitdiff
|
tree
2019-01-23
Paul Ba
u
er
Change gcov to run on
bs-mic
commit
|
commitdiff
|
tree
2019-01-23
Paul Bauer
I
n
tro
d
uc
e
string comparison function
commit
|
commitdiff
|
tree
2019-01-23
Paul Bauer
Move QMMM charge setting t
o
g
r
o
m
pp
commit
|
commitdiff
|
tree
2019-01-22
Paul
B
auer
P
r
epa
r
e fo
r
2
0
18
.
6
commit
|
commitdiff
|
tree
2019-01-22
Pa
u
l
Bauer
Version
2
01
8
.
5
commit
|
commitdiff
|
tree
2019-01-21
P
au
l
Bauer
Re
f
act
o
r Residu
e
Types
commit
|
commitdiff
|
tree
2019-01-18
Paul Bau
e
r
C
hange one gmx_mto
p
_t atom
loop t
o
C++
commit
|
commitdiff
|
tree
2019-01-17
Pau
l
Bauer
Cha
n
ge Res
i
d
ueType
s
to class
commit
|
commitdiff
|
tree
2019-01-16
Paul Ba
u
er
F
i
x memory leak in solvate
commit
|
commitdiff
|
tree
2019-01-15
Pa
u
l
Bauer
Remov
e
raw
pointer
s
in in
d
ex handling
commit
|
commitdiff
|
tree
2019-01-14
Paul Bauer
R
efactor
AtomPro
p
e
r
ties into C
+
+
commit
|
commitdiff
|
tree
2019-01-11
Paul Bauer
Make AtomP
r
operties class w
i
th Impl
commit
|
commitdiff
|
tree
2019-01-10
Pa
u
l
Bauer
Fix string ha
n
dl
i
ng in
vmdio
commit
|
commitdiff
|
tree
2019-01-10
Pa
u
l Bauer
Add mt
o
p com
p
a
ris
o
n function
commit
|
commitdiff
|
tree
2019-01-09
Paul
Bauer
Fix u
n
crustify complaini
n
g
a
b
o
u
t files
commit
|
commitdiff
|
tree
2019-01-07
Paul Ba
u
er
Re
u
s
e
Sphinx en
v
iro
n
m
e
n
t
a
g
ain
commit
|
commitdiff
|
tree
2019-01-07
Paul
Bauer
Remove DOI entrie
s
when not o
n
re
l
ea
s
e patch
commit
|
commitdiff
|
tree
2019-01-04
P
a
ul
B
auer
Change gmx_local
t
op_t to C++
commit
|
commitdiff
|
tree
2018-12-31
Paul Bauer
Prepa
r
e for
2
019
.
1
commit
|
commitdiff
|
tree
2018-12-31
Paul Bauer
GROMACS 2019 rele
a
se
commit
|
commitdiff
|
tree
2018-12-31
Pau
l
Bauer
Merg
e
branch
rel
e
as
e
-
2
0
18 into rele
a
se-2019
commit
|
commitdiff
|
tree
2018-12-27
Paul
B
au
e
r
Do
c
ument OpenCL
timer issue
.
commit
|
commitdiff
|
tree
2018-12-22
Pau
l
B
a
uer
Fix
mdru
n
-nb GPU o
n
non-gp
u
builds
commit
|
commitdiff
|
tree
2018-12-19
Pa
u
l Bauer
Merge "Merg
e
release-201
9
branch into m
a
ster"
commit
|
commitdiff
|
tree
2018-12-17
Paul B
a
u
er
Add
matr
i
x en
t
ry to test exte
r
nal
F
F
TW
buil
d
commit
|
commitdiff
|
tree
2018-12-17
Paul Ba
u
e
r
F
i
x
FFT
W
build
commit
|
commitdiff
|
tree
2018-12-17
P
a
ul Bauer
Copy parallelisation info fr
o
m old web
p
age
commit
|
commitdiff
|
tree
2018-12-17
P
a
ul Bauer
Merge branc
h
release-2018 into release-2019
commit
|
commitdiff
|
tree
2018-12-14
Pa
u
l Bauer
G
R
OMA
C
S 20
1
9 Rel
e
ase candi
d
ate
commit
|
commitdiff
|
tree
2018-12-11
P
aul Bauer
Properly chec
k
for MSVC in buil
d
script
commit
|
commitdiff
|
tree
2018-12-10
Paul B
a
uer
Use
m
o
re const
ref
e
rences in t
o
pology co
d
e
commit
|
commitdiff
|
tree
2018-12-10
Paul Bauer
Disabl
e
gm
x
a
p
i by defaul
t
commit
|
commitdiff
|
tree
2018-12-10
P
a
ul Bauer
Make
r
elea
s
e no
t
e
s html only
commit
|
commitdiff
|
tree
2018-12-10
Paul Ba
u
er
Change to
c
t
r
ee
d
e
p
th in PD
F
m
anual
commit
|
commitdiff
|
tree
2018-12-03
Paul Bauer
F
ix en
e
r
g
y
his
t
ory r
e
a
ding
commit
|
commitdiff
|
tree
2018-11-30
Paul Bauer
R
e
creat
e
flow
c
har
t
figur
e
commit
|
commitdiff
|
tree
2018-11-29
Paul Bauer
More fi
x
es f
o
r
I
m
a
g
eMagick test script
commit
|
commitdiff
|
tree
2018-11-29
Paul Bauer
Fix
energy history r
e
ading
commit
|
commitdiff
|
tree
2018-11-29
Paul
Bauer
Mak
e
Im
a
g
emagick availa
b
ility
m
o
re
v
isible
commit
|
commitdiff
|
tree
2018-11-29
Pa
u
l
Baue
r
Fix reference manual i
m
age
s
izes
commit
|
commitdiff
|
tree
2018-11-29
Paul Ba
u
er
Fix reference
manu
a
l d
o
c build
commit
|
commitdiff
|
tree
2018-11-28
Paul Bauer
Fix gcc-8 warnings
commit
|
commitdiff
|
tree
2018-11-26
P
a
ul Bauer
Fi
x
newline p
r
inti
n
g in -v output
commit
|
commitdiff
|
tree
2018-11-22
Pa
u
l Ba
u
er
Prepare fo
r
2019 release candidate
commit
|
commitdiff
|
tree
2018-11-22
Paul Bauer
G
R
OMACS 2019 th
i
rd beta release
commit
|
commitdiff
|
tree
2018-11-21
Paul
B
auer
Merg
e
branch re
l
ease-2018
into relea
s
e-201
9
commit
|
commitdiff
|
tree
2018-11-15
Paul B
a
uer
Refine FindSphinx
commit
|
commitdiff
|
tree
2018-11-15
Pa
u
l
B
a
uer
Rewor
k
GMX
A
PI
te
s
ts
commit
|
commitdiff
|
tree
2018-11-13
Paul Bauer
A
dd
c
ool
quote
commit
|
commitdiff
|
tree
2018-11-12
Paul Bauer
Upda
t
e to prepare for 2018
.
5 point releas
e
commit
|
commitdiff
|
tree
2018-11-12
Paul B
a
uer
Version 2018
.
4
commit
|
commitdiff
|
tree
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